GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000978-TA|BGIBMGA000978-PA|undefined
         (158 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022904-1|AAY55320.1|  512|Drosophila melanogaster IP12615p pro...    27   8.9  
BT022863-1|AAY55279.1|  451|Drosophila melanogaster IP12715p pro...    27   8.9  
BT022220-1|AAY54636.1|  512|Drosophila melanogaster IP12415p pro...    27   8.9  
AE014297-3952|AAF56594.1|  195|Drosophila melanogaster CG14237-P...    27   8.9  
AE014296-3032|AAN11679.1|  538|Drosophila melanogaster CG32201-P...    27   8.9  

>BT022904-1|AAY55320.1|  512|Drosophila melanogaster IP12615p
           protein.
          Length = 512

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 16/57 (28%), Positives = 27/57 (47%)

Query: 49  NKKKLTKKLRVLNACSNTVYIHCCGLWNEKARLGASWNCHPRTRLRLAPGLMGEITV 105
           N  ++ K L  +    +   + C GL+ +K  L   +     T LRLAP  + EI++
Sbjct: 265 NDVEVEKDLYQVKRSPSNCELGCRGLYRQKTNLVCRYKSTANTFLRLAPLKLEEISL 321


>BT022863-1|AAY55279.1|  451|Drosophila melanogaster IP12715p
           protein.
          Length = 451

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 16/57 (28%), Positives = 27/57 (47%)

Query: 49  NKKKLTKKLRVLNACSNTVYIHCCGLWNEKARLGASWNCHPRTRLRLAPGLMGEITV 105
           N  ++ K L  +    +   + C GL+ +K  L   +     T LRLAP  + EI++
Sbjct: 204 NDVEVEKDLYQVKRSPSNCELGCRGLYRQKTNLVCRYKSTANTFLRLAPLKLEEISL 260


>BT022220-1|AAY54636.1|  512|Drosophila melanogaster IP12415p
           protein.
          Length = 512

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 16/57 (28%), Positives = 27/57 (47%)

Query: 49  NKKKLTKKLRVLNACSNTVYIHCCGLWNEKARLGASWNCHPRTRLRLAPGLMGEITV 105
           N  ++ K L  +    +   + C GL+ +K  L   +     T LRLAP  + EI++
Sbjct: 265 NDVEVEKDLYQVKRSPSNCELGCRGLYRQKTNLVCRYKSTANTFLRLAPLKLEEISL 321


>AE014297-3952|AAF56594.1|  195|Drosophila melanogaster CG14237-PA
           protein.
          Length = 195

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 58  RVLNACSNTVYIHCCGLWNEKARLGASWNCHPRTRLRLAPGLMGEITVQIKPRETSPV 115
           R+L+  SN  +I  CG   + A     + CHP+ +   + G  G +  Q     TS V
Sbjct: 6   RILDLYSNLDWITHCGRPPDHATQERQYRCHPQDQYMSSAGSGGPL-AQANTESTSEV 62


>AE014296-3032|AAN11679.1|  538|Drosophila melanogaster CG32201-PA
           protein.
          Length = 538

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 16/57 (28%), Positives = 27/57 (47%)

Query: 49  NKKKLTKKLRVLNACSNTVYIHCCGLWNEKARLGASWNCHPRTRLRLAPGLMGEITV 105
           N  ++ K L  +    +   + C GL+ +K  L   +     T LRLAP  + EI++
Sbjct: 264 NDVEVEKDLYQVKRSPSNCELGCRGLYRQKTNLVCRYKSTANTFLRLAPLKLEEISL 320


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.320    0.133    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,231,745
Number of Sequences: 52641
Number of extensions: 263977
Number of successful extensions: 524
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 520
Number of HSP's gapped (non-prelim): 5
length of query: 158
length of database: 24,830,863
effective HSP length: 79
effective length of query: 79
effective length of database: 20,672,224
effective search space: 1633105696
effective search space used: 1633105696
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 58 (27.5 bits)