Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000978-TA|BGIBMGA000978-PA|undefined
(158 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.27
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.27
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.27
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.27
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.27
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.27
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.27
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.27
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 4.4
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 7.7
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 7.7
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 7.7
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.27
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 27 ISPSSIRPLSITWFPDQLYFAINKKKLTKK 56
+ PS I+ L + W P L + KK+TKK
Sbjct: 290 VMPSWIKMLFLQWLPCLLRMSRPGKKITKK 319
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.27
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 27 ISPSSIRPLSITWFPDQLYFAINKKKLTKK 56
+ PS I+ L + W P L + KK+TKK
Sbjct: 290 VMPSWIKMLFLQWLPCLLRMSRPGKKITKK 319
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.27
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 27 ISPSSIRPLSITWFPDQLYFAINKKKLTKK 56
+ PS I+ L + W P L + KK+TKK
Sbjct: 290 VMPSWIKMLFLQWLPCLLRMSRPGKKITKK 319
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.27
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 27 ISPSSIRPLSITWFPDQLYFAINKKKLTKK 56
+ PS I+ L + W P L + KK+TKK
Sbjct: 290 VMPSWIKMLFLQWLPCLLRMSRPGKKITKK 319
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.27
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 27 ISPSSIRPLSITWFPDQLYFAINKKKLTKK 56
+ PS I+ L + W P L + KK+TKK
Sbjct: 290 VMPSWIKMLFLQWLPCLLRMSRPGKKITKK 319
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.27
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 27 ISPSSIRPLSITWFPDQLYFAINKKKLTKK 56
+ PS I+ L + W P L + KK+TKK
Sbjct: 290 VMPSWIKMLFLQWLPCLLRMSRPGKKITKK 319
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.4 bits (53), Expect = 0.27
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 27 ISPSSIRPLSITWFPDQLYFAINKKKLTKK 56
+ PS I+ L + W P L + KK+TKK
Sbjct: 358 VMPSWIKMLFLQWLPCLLRMSRPGKKITKK 387
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.4 bits (53), Expect = 0.27
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 27 ISPSSIRPLSITWFPDQLYFAINKKKLTKK 56
+ PS I+ L + W P L + KK+TKK
Sbjct: 358 VMPSWIKMLFLQWLPCLLRMSRPGKKITKK 387
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.4 bits (43), Expect = 4.4
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 34 PLSITWFPDQLYFAINKKKLTKKLRVLNACSNTVYIH 70
PL W + + + KLT ++ N ++TV IH
Sbjct: 504 PLLPNWILENILDMLVLPKLTLEVEEWNPLTDTVPIH 540
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 20.6 bits (41), Expect = 7.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 107 IKPRETSPVQLTCAALQLAASRL 129
++PR SP C A L A ++
Sbjct: 617 VRPRYISPASQVCIAAALIALQI 639
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 20.6 bits (41), Expect = 7.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 4 LVLNQDKRNGRISKLSLGNKITNIS 28
+VL +RN S ++ GN TN S
Sbjct: 214 VVLETCQRNSNNSTITAGNANTNAS 238
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 20.6 bits (41), Expect = 7.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 107 IKPRETSPVQLTCAALQLAASRL 129
++PR SP C A L A ++
Sbjct: 707 VRPRYISPASQVCIAAALIALQI 729
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.320 0.133 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,616
Number of Sequences: 429
Number of extensions: 1905
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of query: 158
length of database: 140,377
effective HSP length: 53
effective length of query: 105
effective length of database: 117,640
effective search space: 12352200
effective search space used: 12352200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 41 (20.6 bits)
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