Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000977-TA|BGIBMGA000977-PA|IPR010913|Single-stranded DNA
binding, IPR011344|Single-strand binding protein, IPR008994|Nucleic
acid-binding, OB-fold, IPR000424|Single-strand binding
protein/Primosomal replication protein n
(121 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HQ48 Cluster: Mitochondrial single-stranded DNA-bindi... 241 3e-63
UniRef50_UPI0000DB7A50 Cluster: PREDICTED: similar to mitochondr... 159 1e-38
UniRef50_P54622 Cluster: Single-stranded DNA-binding protein, mi... 156 9e-38
UniRef50_Q04837 Cluster: Single-stranded DNA-binding protein, mi... 113 8e-25
UniRef50_Q568F8 Cluster: Zgc:110325; n=6; Deuterostomia|Rep: Zgc... 108 3e-23
UniRef50_A7SEZ5 Cluster: Predicted protein; n=1; Nematostella ve... 93 1e-18
UniRef50_Q11NU5 Cluster: Single-stranded DNA-binding protein; n=... 77 7e-14
UniRef50_UPI0000E87BF6 Cluster: Single-strand binding protein fa... 76 2e-13
UniRef50_P56898 Cluster: Single-stranded DNA-binding protein; n=... 72 3e-12
UniRef50_Q4FLZ6 Cluster: Single-stranded DNA-binding protein; n=... 71 8e-12
UniRef50_Q8KB47 Cluster: Single-stranded DNA-binding protein 1; ... 71 8e-12
UniRef50_Q8EA81 Cluster: Single-stranded DNA-binding protein; n=... 70 1e-11
UniRef50_P66848 Cluster: Single-stranded DNA-binding protein; n=... 70 1e-11
UniRef50_Q68Y11 Cluster: Single-stranded DNA-binding protein; n=... 69 3e-11
UniRef50_Q7MXD2 Cluster: Single-stranded DNA-binding protein; n=... 68 4e-11
UniRef50_P40947 Cluster: Single-stranded DNA-binding protein; n=... 68 4e-11
UniRef50_A7JTR3 Cluster: Bifunctional single-stranded DNA-bindin... 68 5e-11
UniRef50_A3HUW7 Cluster: Single-stranded DNA-binding protein; n=... 67 7e-11
UniRef50_Q9PCW1 Cluster: Single-stranded DNA-binding protein; n=... 67 1e-10
UniRef50_A2TRN3 Cluster: Single-stranded DNA-binding protein; n=... 66 1e-10
UniRef50_Q1GII7 Cluster: Single-stranded DNA-binding protein; n=... 66 2e-10
UniRef50_A5UYQ6 Cluster: Single-stranded DNA-binding protein; n=... 65 4e-10
UniRef50_Q5I719 Cluster: Single-stranded DNA-binding protein; n=... 64 5e-10
UniRef50_Q1IPH6 Cluster: Single-stranded DNA-binding protein; n=... 64 5e-10
UniRef50_A3XJ25 Cluster: Single-stranded DNA-binding protein; n=... 64 5e-10
UniRef50_Q74B90 Cluster: Single-stranded DNA-binding protein; n=... 64 7e-10
UniRef50_Q2LVL9 Cluster: Single-stranded DNA-binding protein; n=... 64 7e-10
UniRef50_A6EB39 Cluster: Single-stranded DNA-binding protein; n=... 64 7e-10
UniRef50_Q2S4M7 Cluster: Single-stranded DNA-binding protein; n=... 64 9e-10
UniRef50_Q3DWP5 Cluster: Single-stranded DNA-binding protein; n=... 63 2e-09
UniRef50_Q8I415 Cluster: Single-strand binding protein, putative... 63 2e-09
UniRef50_A4BWV3 Cluster: Single-stranded DNA-binding protein; n=... 62 2e-09
UniRef50_Q5LCZ3 Cluster: Single-stranded DNA-binding protein; n=... 62 3e-09
UniRef50_Q9PHE7 Cluster: Single-stranded DNA-binding protein 1; ... 62 3e-09
UniRef50_Q6G4I8 Cluster: Single-stranded DNA-binding protein; n=... 61 5e-09
UniRef50_A7BTL5 Cluster: Single-strand binding protein/Primosoma... 61 6e-09
UniRef50_A6LDG4 Cluster: Single-stranded DNA-binding protein; n=... 61 6e-09
UniRef50_A5FQL2 Cluster: Single-stranded DNA-binding protein; n=... 61 6e-09
UniRef50_A0LIN0 Cluster: Single-stranded DNA-binding protein; n=... 61 6e-09
UniRef50_Q6AK18 Cluster: Single-stranded DNA-binding protein; n=... 60 8e-09
UniRef50_Q889U1 Cluster: Single-stranded DNA-binding protein; n=... 60 8e-09
UniRef50_Q7VML3 Cluster: Single-stranded DNA-binding protein; n=... 60 1e-08
UniRef50_Q5ZWV8 Cluster: Single-stranded DNA-binding protein; n=... 60 1e-08
UniRef50_A1VC73 Cluster: Single-stranded DNA-binding protein; n=... 60 1e-08
UniRef50_Q8ZJ06 Cluster: Single-stranded DNA-binding protein; n=... 60 1e-08
UniRef50_Q8K933 Cluster: Single-stranded DNA-binding protein; n=... 60 1e-08
UniRef50_A5WGZ1 Cluster: Single-stranded DNA-binding protein; n=... 59 2e-08
UniRef50_A4BXL3 Cluster: Single-stranded DNA-binding protein; n=... 59 3e-08
UniRef50_Q87LA3 Cluster: Single-stranded DNA-binding protein; n=... 59 3e-08
UniRef50_Q2GD12 Cluster: Single-stranded DNA-binding protein; n=... 58 3e-08
UniRef50_Q9KUW2 Cluster: Single-stranded DNA-binding protein; n=... 58 4e-08
UniRef50_A6G1X8 Cluster: Single-stranded DNA-binding protein; n=... 58 6e-08
UniRef50_Q6TFV9 Cluster: Single-stranded DNA-binding protein; n=... 57 8e-08
UniRef50_A1ZRR4 Cluster: Single-stranded DNA-binding protein; n=... 57 8e-08
UniRef50_Q8A7M7 Cluster: Single-stranded DNA-binding protein; n=... 57 8e-08
UniRef50_P28043 Cluster: Plasmid-derived single-stranded DNA-bin... 57 1e-07
UniRef50_A7M293 Cluster: Putative uncharacterized protein; n=1; ... 56 1e-07
UniRef50_Q5PB52 Cluster: Single-stranded DNA-binding protein; n=... 56 2e-07
UniRef50_A5URI9 Cluster: Single-stranded DNA-binding protein; n=... 56 2e-07
UniRef50_Q01NH0 Cluster: Single-stranded DNA-binding protein; n=... 55 3e-07
UniRef50_P34496 Cluster: Uncharacterized protein PAR2.1; n=2; Ca... 55 3e-07
UniRef50_Q847G1 Cluster: Single-stranded DNA-binding protein; n=... 54 5e-07
UniRef50_A0L314 Cluster: Single-stranded DNA-binding protein; n=... 53 1e-06
UniRef50_A0GYZ2 Cluster: Single-stranded DNA-binding protein; n=... 53 2e-06
UniRef50_A4TUK7 Cluster: Single-stranded DNA-binding protein; n=... 52 2e-06
UniRef50_P44409 Cluster: Single-stranded DNA-binding protein; n=... 52 2e-06
UniRef50_O85903 Cluster: Single strand binding protein; n=16; Al... 52 3e-06
UniRef50_A0Q470 Cluster: Single-stranded DNA-binding protein; n=... 52 3e-06
UniRef50_A7HKU6 Cluster: Single-strand binding protein; n=2; The... 52 4e-06
UniRef50_A4V7V9 Cluster: Single-stranded DNA-binding protein; n=... 52 4e-06
UniRef50_Q893X5 Cluster: Single-stranded DNA-binding protein; n=... 51 5e-06
UniRef50_A4NIF7 Cluster: Single-stranded DNA-binding protein; n=... 51 5e-06
UniRef50_Q6YPS0 Cluster: Single-stranded DNA-binding protein; n=... 51 7e-06
UniRef50_Q01P66 Cluster: Single-stranded DNA-binding protein; n=... 51 7e-06
UniRef50_Q1GW29 Cluster: Single-stranded DNA-binding protein; n=... 50 1e-05
UniRef50_Q4AH46 Cluster: Single-stranded DNA-binding protein; n=... 50 2e-05
UniRef50_Q6Q8W0 Cluster: Predicted single-stranded DNA-binding p... 49 2e-05
UniRef50_Q9WZ73 Cluster: Single-stranded DNA-binding protein; n=... 49 2e-05
UniRef50_Q8R6M2 Cluster: Single-stranded DNA-binding protein; n=... 48 4e-05
UniRef50_Q03G53 Cluster: Single-stranded DNA-binding protein; n=... 48 5e-05
UniRef50_A5UU58 Cluster: Single-stranded DNA-binding protein; n=... 48 5e-05
UniRef50_Q1B002 Cluster: Single-stranded DNA-binding protein; n=... 48 6e-05
UniRef50_A6GVS9 Cluster: Single-stranded DNA-binding protein; n=... 48 6e-05
UniRef50_A4XJ53 Cluster: Single-stranded DNA-binding protein; n=... 48 6e-05
UniRef50_Q1Q7I6 Cluster: Strongly similar to single-stranded DNA... 47 1e-04
UniRef50_A3I0F7 Cluster: Single-stranded DNA-binding protein; n=... 47 1e-04
UniRef50_A5MCC1 Cluster: Single-stranded DNA-binding protein; n=... 46 1e-04
UniRef50_Q8XH44 Cluster: Single-stranded DNA-binding protein; n=... 46 1e-04
UniRef50_Q8VRC5 Cluster: Single-stranded DNA-binding protein; n=... 46 2e-04
UniRef50_A1HSI9 Cluster: Single-stranded DNA-binding protein; n=... 46 2e-04
UniRef50_Q8F5K5 Cluster: Single-stranded DNA-binding protein; n=... 45 3e-04
UniRef50_Q9EZL8 Cluster: Single-stranded DNA-binding protein; n=... 45 3e-04
UniRef50_Q0F348 Cluster: Single-strand binding protein; n=1; Mar... 45 4e-04
UniRef50_A1IBI8 Cluster: Single-stranded DNA-binding protein; n=... 45 4e-04
UniRef50_Q6BT23 Cluster: Similar to tr|O74715 Candida parapsilos... 45 4e-04
UniRef50_Q6MC71 Cluster: Single-stranded DNA-binding protein; n=... 44 6e-04
UniRef50_Q11BM6 Cluster: Single-stranded DNA-binding protein; n=... 44 6e-04
UniRef50_Q8KQW1 Cluster: Single-stranded DNA-binding protein; n=... 44 8e-04
UniRef50_Q1N8V8 Cluster: Single-strand binding protein; n=2; Sph... 44 8e-04
UniRef50_Q1QFW4 Cluster: Single-strand binding protein/Primosoma... 44 0.001
UniRef50_A7CZ07 Cluster: Single-strand binding protein; n=1; Opi... 44 0.001
UniRef50_A6NVZ6 Cluster: Single-stranded DNA-binding protein; n=... 44 0.001
UniRef50_A3EVU7 Cluster: Single-stranded DNA-binding protein; n=... 43 0.001
UniRef50_A3DF53 Cluster: Single-stranded DNA-binding protein; n=... 43 0.002
UniRef50_Q3BZX5 Cluster: Single-stranded DNA-binding protein; n=... 42 0.002
UniRef50_Q9B0G2 Cluster: SsDNA binding protein; n=2; unclassifie... 42 0.002
UniRef50_Q2TTX2 Cluster: Single-stranded DNA-binding protein; n=... 42 0.004
UniRef50_A7JWL3 Cluster: Single-stranded DNA-binding protein; n=... 41 0.005
UniRef50_Q6YRK4 Cluster: Single-stranded DNA-binding protein; n=... 41 0.007
UniRef50_Q14QG0 Cluster: Single-stranded DNA-binding protein; n=... 41 0.007
UniRef50_A4EBT9 Cluster: Single-stranded DNA-binding protein; n=... 41 0.007
UniRef50_Q5HJ26 Cluster: Prophage-derived single-stranded DNA-bi... 41 0.007
UniRef50_Q6GCA6 Cluster: Single-stranded DNA-binding protein 2; ... 41 0.007
UniRef50_A6BJZ6 Cluster: Single-stranded DNA-binding protein; n=... 40 0.010
UniRef50_A5FFM4 Cluster: Single-stranded DNA-binding protein; n=... 40 0.010
UniRef50_A7AU72 Cluster: Single-strand binding protein, putative... 40 0.010
UniRef50_Q81JI3 Cluster: Single-stranded DNA-binding protein; n=... 40 0.010
UniRef50_Q69BA3 Cluster: Single-stranded DNA-binding protein; n=... 40 0.013
UniRef50_A5VGC6 Cluster: Single-strand binding protein/Primosoma... 40 0.013
UniRef50_A6TRB9 Cluster: Single-stranded DNA-binding protein; n=... 40 0.017
UniRef50_A6Q465 Cluster: Single-stranded DNA-binding protein; n=... 40 0.017
UniRef50_Q0LSU7 Cluster: Single-stranded DNA-binding protein; n=... 39 0.022
UniRef50_A5HYT7 Cluster: Single-stranded DNA-binding protein; n=... 39 0.022
UniRef50_Q7NWU0 Cluster: Single-stranded DNA-binding protein; n=... 39 0.029
UniRef50_Q4HNB2 Cluster: Single-stranded DNA-binding protein; n=... 39 0.029
UniRef50_A3IFT6 Cluster: Single-stranded DNA-binding protein; n=... 39 0.029
UniRef50_Q8RE26 Cluster: Single-stranded DNA-binding protein; n=... 39 0.029
UniRef50_Q8XNP5 Cluster: Single-stranded DNA-binding protein; n=... 38 0.038
UniRef50_A3EW22 Cluster: Single-stranded DNA-binding protein; n=... 38 0.038
UniRef50_Q899R2 Cluster: Single-stranded DNA-binding protein; n=... 38 0.038
UniRef50_Q8E0Z9 Cluster: Single-stranded DNA-binding protein 3; ... 38 0.038
UniRef50_Q03D48 Cluster: Single-stranded DNA-binding protein; n=... 38 0.051
UniRef50_Q01FS1 Cluster: Single-strand binding protein; n=2; Ost... 38 0.051
UniRef50_A7PUL0 Cluster: Chromosome chr7 scaffold_31, whole geno... 38 0.051
UniRef50_Q4HIR4 Cluster: Single-stranded DNA-binding protein fam... 38 0.067
UniRef50_Q1A0X0 Cluster: Gp101; n=2; unclassified Siphoviridae|R... 38 0.067
UniRef50_Q8F052 Cluster: Single-stranded DNA-binding protein; n=... 38 0.067
UniRef50_A0PZ40 Cluster: Single-stranded DNA-binding protein; n=... 37 0.089
UniRef50_Q8CNK0 Cluster: Single-stranded DNA-binding protein; n=... 37 0.089
UniRef50_O66475 Cluster: Single-stranded DNA-binding protein; n=... 37 0.089
UniRef50_P60471 Cluster: Single-stranded DNA-binding protein; n=... 37 0.089
UniRef50_Q49Z44 Cluster: Single-stranded DNA-binding protein; n=... 37 0.12
UniRef50_Q181R6 Cluster: Single-stranded DNA-binding protein; n=... 37 0.12
UniRef50_Q4ZC22 Cluster: ORF034; n=3; unclassified Siphoviridae|... 37 0.12
UniRef50_Q97KH4 Cluster: Single-stranded DNA-binding protein 1; ... 37 0.12
UniRef50_Q0FXP6 Cluster: Single-strand DNA binding protein; n=1;... 36 0.16
UniRef50_A0LVD2 Cluster: Single-stranded DNA-binding protein; n=... 36 0.16
UniRef50_Q2AZQ3 Cluster: Single-stranded DNA-binding protein; n=... 36 0.21
UniRef50_Q7NHP8 Cluster: Single-stranded DNA-binding protein; n=... 36 0.27
UniRef50_Q6F236 Cluster: Single-stranded DNA-binding protein; n=... 36 0.27
UniRef50_Q8G757 Cluster: Single-stranded DNA-binding protein; n=... 36 0.27
UniRef50_Q38144 Cluster: 36 protein; n=1; Bacillus phage SPP1|Re... 35 0.36
UniRef50_Q184D1 Cluster: Single-stranded DNA-binding protein; n=... 35 0.47
UniRef50_A6T070 Cluster: Single-stranded DNA-binding protein; n=... 35 0.47
UniRef50_A0UX93 Cluster: Single-stranded DNA-binding protein; n=... 35 0.47
UniRef50_Q2U7U2 Cluster: Predicted protein; n=6; Trichocomaceae|... 35 0.47
UniRef50_Q0UG73 Cluster: Putative uncharacterized protein; n=1; ... 35 0.47
UniRef50_P59932 Cluster: Single-stranded DNA-binding protein; n=... 35 0.47
UniRef50_P32445 Cluster: Single-stranded DNA-binding protein RIM... 35 0.47
UniRef50_UPI00015BC979 Cluster: UPI00015BC979 related cluster; n... 34 0.63
UniRef50_A0L9N4 Cluster: Peptidase, M50 family; n=1; Magnetococc... 34 0.63
UniRef50_Q9LII1 Cluster: Similarity to unknown protein; n=1; Ara... 34 0.63
UniRef50_Q55499 Cluster: Single-stranded DNA-binding protein; n=... 34 0.63
UniRef50_O51141 Cluster: Single-stranded DNA-binding protein; n=... 34 0.63
UniRef50_UPI0000DB7E73 Cluster: PREDICTED: hypothetical protein;... 34 0.83
UniRef50_Q1QFG2 Cluster: Single-strand binding protein/Primosoma... 34 0.83
UniRef50_A4J7S4 Cluster: Single-stranded DNA-binding protein; n=... 34 0.83
UniRef50_Q9RY51 Cluster: Single-stranded DNA-binding protein; n=... 34 0.83
UniRef50_A7LTU8 Cluster: Putative uncharacterized protein; n=1; ... 33 1.1
UniRef50_Q9PPT7 Cluster: Single-stranded DNA-binding protein; n=... 33 1.1
UniRef50_Q8GJE0 Cluster: Single-stranded DNA-binding protein; n=... 33 1.4
UniRef50_A7B3C8 Cluster: Putative uncharacterized protein; n=1; ... 33 1.4
UniRef50_A4M9L5 Cluster: Single-stranded DNA-binding protein; n=... 33 1.4
UniRef50_A4JV78 Cluster: Single-stranded DNA-binding protein; n=... 33 1.4
UniRef50_Q5VP75 Cluster: Single-strand DNA binding protein-like;... 33 1.4
UniRef50_Q4E023 Cluster: Mitochondrial DNA polymerase beta-PAK, ... 33 1.4
UniRef50_Q4DK95 Cluster: RNA-editing complex protein, putative; ... 33 1.4
UniRef50_Q927X0 Cluster: Single-stranded DNA-binding protein; n=... 33 1.9
UniRef50_A1WDI7 Cluster: Single-stranded DNA-binding protein; n=... 33 1.9
UniRef50_Q8KAM2 Cluster: Single-stranded DNA-binding protein 2; ... 33 1.9
UniRef50_Q4HGL1 Cluster: Single-stranded DNA-binding protein; n=... 32 2.5
UniRef50_Q8FLP9 Cluster: Single-stranded DNA-binding protein; n=... 32 2.5
UniRef50_Q2L0B3 Cluster: Putative membrane protein; n=1; Bordete... 32 3.3
UniRef50_Q3F0X3 Cluster: Single-stranded DNA-binding protein; n=... 32 3.3
UniRef50_A6DQM0 Cluster: Single-stranded DNA-binding protein; n=... 32 3.3
UniRef50_A4E7B3 Cluster: Putative uncharacterized protein; n=1; ... 32 3.3
UniRef50_O74715 Cluster: Telomere-binding protein; n=1; Candida ... 32 3.3
UniRef50_Q823K0 Cluster: Single-stranded DNA-binding protein; n=... 32 3.3
UniRef50_Q8ABB6 Cluster: Putative uncharacterized protein; n=1; ... 31 4.4
UniRef50_A6S3I4 Cluster: Putative uncharacterized protein; n=2; ... 31 4.4
UniRef50_UPI000038E168 Cluster: hypothetical protein Faci_030010... 31 5.8
UniRef50_Q899V7 Cluster: Putative uncharacterized protein; n=1; ... 31 5.8
UniRef50_Q4A5N0 Cluster: Single-stranded DNA-binding protein; n=... 31 5.8
UniRef50_A6PMD2 Cluster: Single-stranded DNA-binding protein; n=... 31 5.8
UniRef50_A6PBJ0 Cluster: Putative uncharacterized protein; n=1; ... 31 5.8
UniRef50_O25841 Cluster: Single-stranded DNA-binding protein; n=... 31 5.8
UniRef50_Q8GAN5 Cluster: Single-stranded DNA-binding protein; n=... 31 5.8
UniRef50_Q5NXI5 Cluster: Putative uncharacterized protein; n=1; ... 31 7.7
UniRef50_Q4L318 Cluster: Similar to 2-keto-3-deoxygluconate kina... 31 7.7
UniRef50_A4A539 Cluster: WalW protein; n=1; Congregibacter litor... 31 7.7
UniRef50_A7PRW7 Cluster: Chromosome chr14 scaffold_27, whole gen... 31 7.7
UniRef50_Q9HSH8 Cluster: Putative uncharacterized protein; n=1; ... 31 7.7
UniRef50_A0B671 Cluster: Indolepyruvate ferredoxin oxidoreductas... 31 7.7
UniRef50_Q83N34 Cluster: Single-stranded DNA-binding protein 1; ... 31 7.7
UniRef50_P56211 Cluster: cAMP-regulated phosphoprotein 19; n=40;... 31 7.7
>UniRef50_Q1HQ48 Cluster: Mitochondrial single-stranded DNA-binding
protein; n=2; Endopterygota|Rep: Mitochondrial
single-stranded DNA-binding protein - Bombyx mori (Silk
moth)
Length = 148
Score = 241 bits (589), Expect = 3e-63
Identities = 112/113 (99%), Positives = 113/113 (100%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRD 68
INQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRD
Sbjct: 36 INQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRD 95
Query: 69 TVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPYESEQ 121
TVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTV+ADDVIFFQSTPYESEQ
Sbjct: 96 TVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVMADDVIFFQSTPYESEQ 148
>UniRef50_UPI0000DB7A50 Cluster: PREDICTED: similar to mitochondrial
single stranded DNA-binding protein CG4337-PA, isoform
A, partial; n=1; Apis mellifera|Rep: PREDICTED: similar
to mitochondrial single stranded DNA-binding protein
CG4337-PA, isoform A, partial - Apis mellifera
Length = 108
Score = 159 bits (386), Expect = 1e-38
Identities = 68/104 (65%), Positives = 87/104 (83%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRD 68
INQVTLLGRVG + QK+GS EHPV+ F LATH +YKY +GDI+QRTDWH++ +FKP LR+
Sbjct: 1 INQVTLLGRVGGEAQKKGSNEHPVVIFSLATHNNYKYTNGDIVQRTDWHKICVFKPNLRE 60
Query: 69 TVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFF 112
VY YLKKGQR+ V+GK+SYGE K ++G +++ + VIADDVIFF
Sbjct: 61 NVYTYLKKGQRVLVSGKISYGEYKDEEGAIKSTTAVIADDVIFF 104
>UniRef50_P54622 Cluster: Single-stranded DNA-binding protein,
mitochondrial precursor; n=6; Endopterygota|Rep:
Single-stranded DNA-binding protein, mitochondrial
precursor - Drosophila melanogaster (Fruit fly)
Length = 146
Score = 156 bits (379), Expect = 9e-38
Identities = 67/105 (63%), Positives = 86/105 (81%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRD 68
+N VT+LGRVGADPQ RGS+EHPV+ F +ATH +YKYE+GD QRTDWHRV +FKP LRD
Sbjct: 38 VNTVTILGRVGADPQLRGSQEHPVVTFSVATHTNYKYENGDWAQRTDWHRVVVFKPNLRD 97
Query: 69 TVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQ 113
TV +YLKKGQR V GK++YGE+ G +T++++IADDV+FF+
Sbjct: 98 TVLEYLKKGQRTMVQGKITYGEITDQQGNQKTSTSIIADDVLFFR 142
>UniRef50_Q04837 Cluster: Single-stranded DNA-binding protein,
mitochondrial precursor; n=29; Euteleostomi|Rep:
Single-stranded DNA-binding protein, mitochondrial
precursor - Homo sapiens (Human)
Length = 148
Score = 113 bits (272), Expect = 8e-25
Identities = 56/120 (46%), Positives = 79/120 (65%), Gaps = 7/120 (5%)
Query: 8 AINQVTLLGRVGADPQKRGSE-EHPVINFPLATHYSYK------YESGDILQRTDWHRVS 60
++N+V LLGRVG DP R E ++PV F LAT+ ++ Y+ GD+ Q+T WHR+S
Sbjct: 29 SLNRVHLLGRVGQDPVLRQVEGKNPVTIFSLATNEMWRSGDSEVYQLGDVSQKTTWHRIS 88
Query: 61 IFKPGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPYESE 120
+F+PGLRD Y+Y+KKG RIY+ GK+ YGE + R A+T+IAD++IF E E
Sbjct: 89 VFRPGLRDVAYQYVKKGSRIYLEGKIDYGEYMDKNNVRRQATTIIADNIIFLSDQTKEKE 148
>UniRef50_Q568F8 Cluster: Zgc:110325; n=6; Deuterostomia|Rep:
Zgc:110325 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 146
Score = 108 bits (259), Expect = 3e-23
Identities = 53/111 (47%), Positives = 75/111 (67%), Gaps = 7/111 (6%)
Query: 8 AINQVTLLGRVGADPQKRGSE-EHPVINFPLATHYSYK------YESGDILQRTDWHRVS 60
+IN+V +LGRVG DP R E +PV F +AT+ ++ +GD+ Q+T WHR+S
Sbjct: 28 SINKVQILGRVGQDPVMRQVEGRNPVTIFSMATNEMWRSGEGEPVGAGDVTQKTTWHRIS 87
Query: 61 IFKPGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIF 111
+FKPGLRD Y+Y+KKG RI+V GKL YGE + R A+T+IAD+++F
Sbjct: 88 VFKPGLRDVAYQYVKKGSRIFVEGKLDYGEYVDKNNVRRQATTIIADNIVF 138
>UniRef50_A7SEZ5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 160
Score = 93.1 bits (221), Expect = 1e-18
Identities = 41/115 (35%), Positives = 66/115 (57%)
Query: 7 TAINQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
T +N V L+G GADPQ G++ H LAT Y+ + + +T WH +SIFKP L
Sbjct: 43 TGLNSVQLIGYTGADPQSFGTDSHSGTRLSLATTSYYRTKDDKLHSKTSWHNISIFKPSL 102
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPYESEQ 121
++ V ++++G R++V G L Y DGQ + ++++I +D+I S P E+
Sbjct: 103 QEKVNLHVRRGSRLFVQGSLDYTSYVDQDGQKKYSTSIIPNDIIILNSRPSPEEE 157
>UniRef50_Q11NU5 Cluster: Single-stranded DNA-binding protein; n=1;
Cytophaga hutchinsonii ATCC 33406|Rep: Single-stranded
DNA-binding protein - Cytophaga hutchinsonii (strain
ATCC 33406 / NCIMB 9469)
Length = 152
Score = 77.4 bits (182), Expect = 7e-14
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 6 ITAINQVTLLGRVGADPQKRG-SEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKP 64
+ IN+V L+G +G DP+ R + V NF LAT SYK +SG+ + +T+WH V + P
Sbjct: 1 MAGINKVILVGNLGKDPEVRAIGTDRKVANFSLATTESYKNKSGERVDQTEWHNVVFYGP 60
Query: 65 GLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIAD 107
+ D + +YL+KG +IYV GK+ DG + + +I D
Sbjct: 61 -VADVIERYLRKGSQIYVEGKIRTRSYDDKDGVKKYITEIIGD 102
>UniRef50_UPI0000E87BF6 Cluster: Single-strand binding protein
family; n=1; Methylophilales bacterium HTCC2181|Rep:
Single-strand binding protein family - Methylophilales
bacterium HTCC2181
Length = 148
Score = 76.2 bits (179), Expect = 2e-13
Identities = 37/108 (34%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 8 AINQVTLLGRVGADPQKR-GSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
++N+V L+GR+G DP+ R + + P+ +F +AT YK + G+ ++T+WH +S+F L
Sbjct: 2 SVNKVILVGRLGRDPEARYTANQQPICSFAVATSRRYKDKEGNNQEQTEWHNISMFGK-L 60
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQS 114
+ +YLKKG ++Y+ G+L + + DGQ R + ++AD + S
Sbjct: 61 AEIGNQYLKKGSQVYLEGRLQTNKSE-KDGQTRYFTQIVADQMTMLGS 107
>UniRef50_P56898 Cluster: Single-stranded DNA-binding protein;
n=113; Bacteria|Rep: Single-stranded DNA-binding protein
- Rhizobium meliloti (Sinorhizobium meliloti)
Length = 174
Score = 71.7 bits (168), Expect = 3e-12
Identities = 34/100 (34%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
Query: 8 AINQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYK-YESGDILQRTDWHRVSIFKPG 65
++N+V L+G VGADP+ R +++ P+ N +AT +++ SG+ ++T+WH V +F G
Sbjct: 4 SVNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTEWHTVVVFNEG 63
Query: 66 LRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVI 105
L V +Y+KKG ++Y+ G+L + + G R ++ V+
Sbjct: 64 LCKVVEQYVKKGAKLYIEGQLQTRKWQDQTGNDRYSTEVV 103
>UniRef50_Q4FLZ6 Cluster: Single-stranded DNA-binding protein; n=2;
Candidatus Pelagibacter ubique|Rep: Single-stranded
DNA-binding protein - Pelagibacter ubique
Length = 152
Score = 70.5 bits (165), Expect = 8e-12
Identities = 37/101 (36%), Positives = 66/101 (65%), Gaps = 3/101 (2%)
Query: 8 AINQVTLLGRVGADPQ-KRGSEEHPVINFPLATHYSYKYES-GDILQRTDWHRVSIFKPG 65
++N+V L+GR+GADP+ K+ V LAT S+K ++ G+ ++T+WHR+ +F G
Sbjct: 4 SLNKVLLIGRLGADPEIKQMVNGKSVARLSLATSQSWKDKTTGEKKEKTEWHRIVVFNDG 63
Query: 66 LRDTVYKYLKKGQRIYVTGKLSYGEVKLD-DGQVRTASTVI 105
L + V +YLKKG +IYV G+++ + K + GQ + ++ ++
Sbjct: 64 LVNVVQQYLKKGAQIYVEGQIATRKWKDEQSGQDKYSTEIV 104
>UniRef50_Q8KB47 Cluster: Single-stranded DNA-binding protein 1;
n=8; Chlorobiaceae|Rep: Single-stranded DNA-binding
protein 1 - Chlorobium tepidum
Length = 162
Score = 70.5 bits (165), Expect = 8e-12
Identities = 32/79 (40%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 9 INQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N+V L+G +G DP++R + V+NF LAT +K SG++ +RT+WHR+ + L
Sbjct: 5 LNKVMLIGHLGNDPERRETASGQSVVNFTLATSEGFKDSSGNLQERTEWHRIVAWGK-LA 63
Query: 68 DTVYKYLKKGQRIYVTGKL 86
D +YLKKG+++Y+ G+L
Sbjct: 64 DICSQYLKKGRQVYIEGRL 82
>UniRef50_Q8EA81 Cluster: Single-stranded DNA-binding protein; n=97;
root|Rep: Single-stranded DNA-binding protein -
Shewanella oneidensis
Length = 238
Score = 69.7 bits (163), Expect = 1e-11
Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 9 INQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N+V L+G +G DP+ R + V N +AT S+K + G +RT+WHRV +F L
Sbjct: 6 VNKVILVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQGQQQERTEWHRVVLFGK-LA 64
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIAD 107
+ +YL+KG ++Y+ GKL + K GQ R ++ V+ D
Sbjct: 65 EITGEYLRKGSQVYLEGKLQTRKWKDQSGQDRYSTEVVID 104
>UniRef50_P66848 Cluster: Single-stranded DNA-binding protein; n=4;
Neisseria|Rep: Single-stranded DNA-binding protein -
Neisseria meningitidis serogroup A
Length = 174
Score = 69.7 bits (163), Expect = 1e-11
Identities = 33/103 (32%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 8 AINQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
++N+V L+GR+G DP+ R V NF +AT ++ +G ++RT+WH +++++ L
Sbjct: 2 SLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTEWHNITMYRK-L 60
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
+ +YLKKG +Y+ G++ + + DG RTA ++A+++
Sbjct: 61 AEIAGQYLKKGGLVYLEGRIQSRKYQGKDGIERTAYDIVANEM 103
>UniRef50_Q68Y11 Cluster: Single-stranded DNA-binding protein; n=10;
Rickettsieae|Rep: Single-stranded DNA-binding protein -
Rickettsia typhi
Length = 152
Score = 68.5 bits (160), Expect = 3e-11
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 8 AINQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYE-SGDILQRTDWHRVSIFKPG 65
++N+V L+G VG DP+ R + E +IN LAT ++K + + +RT+WHRV IF G
Sbjct: 4 SLNKVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSERKERTEWHRVVIFSEG 63
Query: 66 LRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVI 105
L V +Y+ KG ++Y+ G L + + GQ + + V+
Sbjct: 64 LVSIVERYVTKGSKLYIEGSLQTRKWNDNSGQEKYTTEVV 103
>UniRef50_Q7MXD2 Cluster: Single-stranded DNA-binding protein; n=1;
Porphyromonas gingivalis|Rep: Single-stranded
DNA-binding protein - Porphyromonas gingivalis
(Bacteroides gingivalis)
Length = 156
Score = 68.1 bits (159), Expect = 4e-11
Identities = 37/110 (33%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 8 AINQVTLLGRVGADPQKRGSEEHPVI-NFPLAT-HYSYKYESG-DILQRTDWHRVSIFKP 64
++N++ L+GR G DP+ R + + + NF LAT YK +G ++ +RT+WH V ++
Sbjct: 2 SLNKIILIGRTGKDPEIRYFDSNSAVANFSLATSERGYKLANGTEVPERTEWHNVVAYRE 61
Query: 65 GLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQS 114
L K++KKG +YV GK+ Y + G R + ++A+ + FF+S
Sbjct: 62 -LAIFAEKWIKKGSLLYVEGKIRYRTYVDNTGVRRQVTEILAEKINFFES 110
>UniRef50_P40947 Cluster: Single-stranded DNA-binding protein; n=12;
Gammaproteobacteria|Rep: Single-stranded DNA-binding
protein - Pseudomonas aeruginosa
Length = 165
Score = 68.1 bits (159), Expect = 4e-11
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 9 INQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYK-YESGDILQRTDWHRVSIFKPGL 66
+N+V L+G VG DP+ R + V N LAT S+K ++G +RT+WHRV +F L
Sbjct: 5 VNKVILVGNVGGDPETRYMPNGNAVTNITLATSESWKDKQTGQQQERTEWHRV-VFFGRL 63
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIAD 107
+ +YL+KG ++YV G L + + DGQ R + ++ D
Sbjct: 64 AEIAGEYLRKGSQVYVEGSLRTRKWQGQDGQDRYTTEIVVD 104
>UniRef50_A7JTR3 Cluster: Bifunctional single-stranded DNA-binding
protein/integrase; n=3; Pasteurellaceae|Rep:
Bifunctional single-stranded DNA-binding
protein/integrase - Mannheimia haemolytica PHL213
Length = 324
Score = 67.7 bits (158), Expect = 5e-11
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 5/107 (4%)
Query: 6 ITAINQVTLLGRVGADPQKR---GSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIF 62
+ IN+V ++GR+G DP+ R + I+ +T ++ K SG+ Q T+WH + F
Sbjct: 1 MAGINKVIIVGRLGNDPELRTMPNGDSVAKISVATSTEWTDK-TSGEKKQATEWHSIIAF 59
Query: 63 KPGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
+ L D + KYLKKG ++YV GKL + + DG R + +IAD +
Sbjct: 60 R-NLADIIGKYLKKGSQVYVEGKLRTRKWQAQDGTDRWTTEIIADQL 105
>UniRef50_A3HUW7 Cluster: Single-stranded DNA-binding protein;
n=1; Algoriphagus sp. PR1|Rep: Single-stranded
DNA-binding protein - Algoriphagus sp. PR1
Length = 149
Score = 67.3 bits (157), Expect = 7e-11
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 6 ITAINQVTLLGRVGADPQKRGSE-EHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKP 64
+ +N+V LLG +GADP+ + E E V N LAT SYK SG+ + +T+WH + ++
Sbjct: 1 MAGVNKVILLGNLGADPEVKYLEGEKVVANLRLATTESYKDRSGNRVDQTEWHDLEMW-D 59
Query: 65 GLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVR 99
G +YL+KG +IYV GK+ + ++GQ R
Sbjct: 60 GQAKIAEQYLRKGSQIYVEGKIKSDTWQDENGQNR 94
>UniRef50_Q9PCW1 Cluster: Single-stranded DNA-binding protein; n=17;
Xylella fastidiosa|Rep: Single-stranded DNA-binding
protein - Xylella fastidiosa
Length = 151
Score = 66.9 bits (156), Expect = 1e-10
Identities = 36/102 (35%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVI-NFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
IN+V L+G +G +P + ++ I + LAT K GD +RT+WHRV F L
Sbjct: 5 INKVILVGNLGNEPDIKYTQSGMTITSISLATSSKRKDREGDTQERTEWHRVKFFGK-LG 63
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
+ +YL KG + Y+ G + Y + +DGQ R + +IAD +
Sbjct: 64 EIAAEYLHKGSQCYIEGAIRYDKFTGNDGQERYVTEIIADQM 105
>UniRef50_A2TRN3 Cluster: Single-stranded DNA-binding protein; n=2;
Flavobacteria|Rep: Single-stranded DNA-binding protein -
Dokdonia donghaensis MED134
Length = 112
Score = 66.5 bits (155), Expect = 1e-10
Identities = 34/102 (33%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 10 NQVTLLGRVGADPQ-KRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRD 68
N+V L+GR+G DPQ + + + NF +AT SYK ++G ++R WH + + + GL
Sbjct: 6 NKVQLIGRLGQDPQITTFPDGNKIANFSMATDDSYKDKNGQKIERAYWHNI-VVRGGLVK 64
Query: 69 TVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVI 110
V Y++KGQ I + GKL+ + DG R + ++ ++++
Sbjct: 65 VVESYVQKGQEIAIEGKLTNRSWEDKDGIKRYTTEIVCNELL 106
>UniRef50_Q1GII7 Cluster: Single-stranded DNA-binding protein; n=2;
Alphaproteobacteria|Rep: Single-stranded DNA-binding
protein - Silicibacter sp. (strain TM1040)
Length = 159
Score = 65.7 bits (153), Expect = 2e-10
Identities = 33/100 (33%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Query: 8 AINQVTLLGRVGADPQKRGSEEH-PVINFPLATHYSYK-YESGDILQRTDWHRVSIFKPG 65
++N+V L+G +G DP+ R + V N +AT ++K +G+ ++T+WH V+IF G
Sbjct: 5 SLNKVMLIGNLGRDPEVRTFQNGGKVCNLRIATSETWKDRNTGERREKTEWHSVAIFNEG 64
Query: 66 LRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVI 105
L +YL+KG ++YV G+L + + GQ R ++ ++
Sbjct: 65 LVRVAEQYLRKGSKVYVEGQLQTRKWQDQSGQDRYSTEIV 104
>UniRef50_A5UYQ6 Cluster: Single-stranded DNA-binding protein; n=5;
Chloroflexi (class)|Rep: Single-stranded DNA-binding
protein - Roseiflexus sp. RS-1
Length = 151
Score = 64.9 bits (151), Expect = 4e-10
Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 9 INQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N+V ++GR+G DP+ R + PV F +AT +K SG++ + T+W V + L
Sbjct: 5 LNKVMIIGRLGKDPEMRYTPGGSPVTTFSVATGRQWKDGSGELHEETEWFNVVTWNK-LA 63
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQST-PYESEQ 121
+ +++L+K R+Y+ G+L + +G + V+A D+I S P ES Q
Sbjct: 64 EICHEHLRKSSRVYIEGRLQTRHWEDQNGVTHYRTEVVASDMIMLDSRGPRESSQ 118
>UniRef50_Q5I719 Cluster: Single-stranded DNA-binding protein; n=1;
Dichelobacter nodosus|Rep: Single-stranded DNA-binding
protein - Dichelobacter nodosus (Bacteroides nodosus)
Length = 146
Score = 64.5 bits (150), Expect = 5e-10
Identities = 33/106 (31%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Query: 6 ITAINQVTLLGRVGADPQKR-GSEEHPVINFPLATHYSYK-YESGDILQRTDWHRVSIFK 63
+ +N+V LLG VG +P R + E V NF LAT+ S+ ++G+ +T+WHR ++
Sbjct: 1 MAGVNKVILLGYVGQNPDVRIMTNEQQVANFSLATNISWNDRQTGEKCTKTEWHRCVAYR 60
Query: 64 PGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
L + + +Y++KG ++Y+ G+L + K +G + +I D++
Sbjct: 61 R-LAEIIGQYVRKGSQLYLEGRLETRKWKSQEGDKHYMTEIIVDEI 105
>UniRef50_Q1IPH6 Cluster: Single-stranded DNA-binding protein; n=7;
Bacteria|Rep: Single-stranded DNA-binding protein -
Acidobacteria bacterium (strain Ellin345)
Length = 164
Score = 64.5 bits (150), Expect = 5e-10
Identities = 34/107 (31%), Positives = 66/107 (61%), Gaps = 7/107 (6%)
Query: 8 AINQVTLLGRVGADPQKRGSEEHPVI-NFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
++N+V L+G VG DP+ + + + I F +AT +K + G+ RT+WH ++ ++ L
Sbjct: 4 SVNKVILVGNVGKDPEVKYTPQGTAIARFSVATSERFKDKQGEWQDRTEWHSITAWQK-L 62
Query: 67 RDTVYKYLKKGQRIYVTGKL---SYGEVKLDDGQVRTASTVIADDVI 110
+ V +Y+KKG +IY+ G+L S+ + K + + RT ++A+D++
Sbjct: 63 AEIVGEYVKKGNKIYIEGRLRTDSWDDQKTGEKKYRT--EIVANDIV 107
>UniRef50_A3XJ25 Cluster: Single-stranded DNA-binding protein; n=4;
Flavobacteriaceae|Rep: Single-stranded DNA-binding
protein - Leeuwenhoekiella blandensis MED217
Length = 114
Score = 64.5 bits (150), Expect = 5e-10
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 10 NQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRD 68
N V L+G VG +P E V F LAT+ YK G+ T+WH V + +
Sbjct: 6 NHVQLIGNVGQEPTITNLESGKKVARFSLATNEYYKDSKGEKQTDTNWHTVVAWGK-TAE 64
Query: 69 TVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQS 114
V KY++KG+ + +TGKL DDG R + V+AD+++ S
Sbjct: 65 IVEKYVEKGKEVGITGKLKTRTYTTDDGNQRYVTDVVADEILLLGS 110
>UniRef50_Q74B90 Cluster: Single-stranded DNA-binding protein; n=5;
Desulfuromonadales|Rep: Single-stranded DNA-binding
protein - Geobacter sulfurreducens
Length = 139
Score = 64.1 bits (149), Expect = 7e-10
Identities = 34/110 (30%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 6 ITAINQVTLLGRVGADPQKRGSEEHPVI-NFPLATHYSYKYESGDILQRTDWHRVSIFKP 64
+ ++N+V L+G +G DP+ R + + +F LAT K +SG+ RT+WH + ++
Sbjct: 1 MASLNRVELIGNLGRDPEIRYTPGGTAVASFSLATSEKVKNKSGEWETRTEWHNIVLYAR 60
Query: 65 GLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQS 114
L + +YL KG+ +Y+ GKL + + DG+ R + +I D ++ S
Sbjct: 61 -LAEVAGEYLSKGKSVYLDGKLKTRKWQDRDGKDRYTTEIIGDKLLMLGS 109
>UniRef50_Q2LVL9 Cluster: Single-stranded DNA-binding protein; n=1;
Syntrophus aciditrophicus SB|Rep: Single-stranded
DNA-binding protein - Syntrophus aciditrophicus (strain
SB)
Length = 139
Score = 64.1 bits (149), Expect = 7e-10
Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVI-NFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
IN+ L+GR+G DP+ R + + ++ +F LAT +K ++G+ Q T+WH + +F L
Sbjct: 2 INKAILIGRLGKDPEVRYTPDGAMVTSFSLATDRQWKDKNGERAQETEWHNIVVFGK-LA 60
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
+ YL KG +Y+ G++ + DG R + +IA D+
Sbjct: 61 EICGNYLAKGLLVYIEGRIRSRSWEGKDGVKRYTTEIIAQDM 102
>UniRef50_A6EB39 Cluster: Single-stranded DNA-binding protein;
n=1; Pedobacter sp. BAL39|Rep: Single-stranded
DNA-binding protein - Pedobacter sp. BAL39
Length = 142
Score = 64.1 bits (149), Expect = 7e-10
Identities = 31/82 (37%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 6 ITAINQVTLLGRVGADPQKRGSEEH-PVINFPLATHYSYKYESGDILQRTDWHRVSIFKP 64
++ IN+V L+G +G DP+ R + V +FPLAT +Y + G +++T+WH + +++
Sbjct: 1 MSGINKVILVGHLGKDPEVRHLDGGVTVASFPLATSETYN-KDGKRIEQTEWHNIVLWR- 58
Query: 65 GLRDTVYKYLKKGQRIYVTGKL 86
GL + KYL+KG+ +Y+ GKL
Sbjct: 59 GLAEVASKYLQKGKLVYIEGKL 80
>UniRef50_Q2S4M7 Cluster: Single-stranded DNA-binding protein; n=2;
Salinibacter ruber DSM 13855|Rep: Single-stranded
DNA-binding protein - Salinibacter ruber (strain DSM
13855)
Length = 170
Score = 63.7 bits (148), Expect = 9e-10
Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 8 AINQVTLLGRVGADPQKRGSEEHPVI-NFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
++N+V L+G +G DP+ R + + N LAT+ SY G+ +Q+T+WH V + L
Sbjct: 4 SVNKVVLIGNLGDDPELRYTGSGTAVCNMSLATNESYTNSDGEEVQQTEWHDV-VAWGRL 62
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTP 116
+ +YL++G ++Y GK+ + + DG R ++ V A + F P
Sbjct: 63 GEVCNEYLERGSQVYFEGKIETNQWEDQDGNTRYSTEVKALEATFLGEGP 112
>UniRef50_Q3DWP5 Cluster: Single-stranded DNA-binding protein; n=3;
Chloroflexaceae|Rep: Single-stranded DNA-binding protein
- Chloroflexus aurantiacus J-10-fl
Length = 176
Score = 62.9 bits (146), Expect = 2e-09
Identities = 36/103 (34%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 9 INQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N+V L G +GADP+ R + + V F +A++ +++ + G+ + T+W RV + L
Sbjct: 5 LNKVQLTGHLGADPEMRYTAQGSAVTTFRVASNRTWRDKDGNTHEETEWFRVVAWDK-LG 63
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVI 110
+ +YL KG R+YV G+L + DGQ R + VIA D+I
Sbjct: 64 EICNQYLTKGTRVYVEGRLQTRKWTDRDGQDRYTTEVIAQDMI 106
>UniRef50_Q8I415 Cluster: Single-strand binding protein, putative;
n=5; Plasmodium|Rep: Single-strand binding protein,
putative - Plasmodium falciparum (isolate 3D7)
Length = 284
Score = 62.9 bits (146), Expect = 2e-09
Identities = 29/81 (35%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 8 AINQVTLLGRVGADPQ-KRGSEEHPVINFPLATHYSYK-YESGDILQRTDWHRVSIFKPG 65
++N++ L+GRVG +P K + V F LAT+ ++ + ++ +TDWHR+ ++
Sbjct: 81 SLNKIMLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDRNTNELKSKTDWHRIVVYDQN 140
Query: 66 LRDTVYKYLKKGQRIYVTGKL 86
+ D + KYL+KG+R+YV G L
Sbjct: 141 IVDLIDKYLRKGRRVYVQGSL 161
>UniRef50_A4BWV3 Cluster: Single-stranded DNA-binding protein; n=2;
Bacteroidetes|Rep: Single-stranded DNA-binding protein -
Polaribacter irgensii 23-P
Length = 131
Score = 62.5 bits (145), Expect = 2e-09
Identities = 33/109 (30%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 3 YICITAINQVTLLGRVGADPQ-KRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSI 61
Y+ T N+V L+GR+G +P+ + + + F +AT SYK + G ++R WH + I
Sbjct: 18 YLMNTLRNKVQLIGRLGQEPEIVTFKDGNKMAKFSMATDDSYKDKEGTKVERAYWHNI-I 76
Query: 62 FKPGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVI 110
GL + V Y+ KGQ I + GKL+ + +G+ R + ++ +++
Sbjct: 77 ITGGLVNVVENYVNKGQEIALEGKLTNRSYETKEGEKRYVTEILVSELL 125
>UniRef50_Q5LCZ3 Cluster: Single-stranded DNA-binding protein; n=1;
Bacteroides fragilis NCTC 9343|Rep: Single-stranded
DNA-binding protein - Bacteroides fragilis (strain ATCC
25285 / NCTC 9343)
Length = 129
Score = 62.1 bits (144), Expect = 3e-09
Identities = 32/105 (30%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 8 AINQVTLLGRVGADPQKRGSEEH-PVINFPLA-THYSYKYESGDIL-QRTDWHRVSIFKP 64
++N+ +G +G D + R +E V F +A T +Y ++G + +RT+W V ++
Sbjct: 2 SVNKCIFIGNMGRDAEVRTTETGIKVAQFSIACTERAYTNKAGQTIPERTEWIPVVAWR- 60
Query: 65 GLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
GL +T+ KY KG ++Y+ G+ + + + +DGQ RT S ++A+ +
Sbjct: 61 GLAETIEKYTHKGSKLYIEGRFTTRKYETNDGQKRTVSEIVAESI 105
>UniRef50_Q9PHE7 Cluster: Single-stranded DNA-binding protein 1;
n=1; Xylella fastidiosa|Rep: Single-stranded DNA-binding
protein 1 - Xylella fastidiosa
Length = 136
Score = 62.1 bits (144), Expect = 3e-09
Identities = 34/106 (32%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
Query: 6 ITAINQVTLLGRVGADPQKRGSEEH-PVINFPLATHYSYK-YESGDILQRTDWHRVSIFK 63
+ ++N++ L+G +GADP R ++ P + +AT ++K ++G+ ++T+WHRV +F
Sbjct: 1 MASLNKMQLIGNLGADPDIRYMQDGTPTVTVSVATTDTWKDKDTGNKEEKTEWHRV-VFF 59
Query: 64 PGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
GL + V ++LKKG +IYV G L +G R + ++A ++
Sbjct: 60 GGLAEIVGEFLKKGSQIYVEGALRSRNWTDKEGNKRYTTEIMAKEM 105
>UniRef50_Q6G4I8 Cluster: Single-stranded DNA-binding protein; n=2;
Bartonella henselae|Rep: Single-stranded DNA-binding
protein - Bartonella henselae (Rochalimaea henselae)
Length = 148
Score = 61.3 bits (142), Expect = 5e-09
Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 9 INQVTLLGRVGADPQKRG-SEEHPVINFPLATHYSYKYESG-DILQRTDWHRVSIFKPGL 66
+N+V L+G +G DP+ + + V+NF +AT SY ++ +++T+WH V +F P
Sbjct: 2 LNKVMLIGYLGDDPESKTITSGAEVVNFRMATSESYMNKNTYQKVEKTEWHSVVVFNPHF 61
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVI 105
+YL KG ++Y+ GKL + + +G R + ++
Sbjct: 62 AKIALQYLHKGSKVYIEGKLQTRKWQDKNGHDRYTTEIV 100
>UniRef50_A7BTL5 Cluster: Single-strand binding protein/Primosomal
replication protein n; n=1; Beggiatoa sp. PS|Rep:
Single-strand binding protein/Primosomal replication
protein n - Beggiatoa sp. PS
Length = 225
Score = 60.9 bits (141), Expect = 6e-09
Identities = 36/109 (33%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVI-NFPLATHYSYK-YESGDILQRTDWHRVSIFKPGL 66
+N+V L+G +G DP+ R ++ I LAT++S K ++G+ T+WHRV F+ L
Sbjct: 5 VNKVILVGHLGIDPEIRTTQSGMTIATVKLATNFSTKDKQTGEWRDETEWHRVVFFER-L 63
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVK-LDDGQVRTASTVIADDVIFFQS 114
+ V +YL+KG +IYV G++ + + + GQ R + ++A ++ S
Sbjct: 64 AEIVKQYLRKGSQIYVEGRIKTNKWQDQNTGQDRYMTEIVAREMQMLDS 112
>UniRef50_A6LDG4 Cluster: Single-stranded DNA-binding protein; n=2;
Parabacteroides|Rep: Single-stranded DNA-binding protein
- Parabacteroides distasonis (strain ATCC 8503 / DSM
20701 / NCTC11152)
Length = 169
Score = 60.9 bits (141), Expect = 6e-09
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 8 AINQVTLLGRVGADPQKRGSEEHPVI-NFPLAT-HYSYKYESGDIL-QRTDWHRVSIFKP 64
++N+V L+G VG DP R + + NFPLAT Y +G ++ +RT+WH + + +
Sbjct: 2 SLNKVILIGNVGKDPDVRYFDSGAAVANFPLATSERGYTLANGTVVPERTEWHNI-VVRR 60
Query: 65 GLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQS 114
L V K+++KG +YV GK+ G R + + AD + F+ +
Sbjct: 61 DLVPFVEKWVRKGSGVYVEGKIRTRNYDDQSGVKRYVTEIHADRIEFYST 110
>UniRef50_A5FQL2 Cluster: Single-stranded DNA-binding protein; n=3;
Dehalococcoides|Rep: Single-stranded DNA-binding protein
- Dehalococcoides sp. BAV1
Length = 135
Score = 60.9 bits (141), Expect = 6e-09
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 6 ITAINQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYESGDILQRTDWHRVSIFKP 64
+ ++N+V ++G VG +P+ R + HPV +F +AT++ Y G+ Q T+W V +
Sbjct: 1 MVSLNKVMIIGNVGGEPEMRYTPSGHPVTSFKVATNWVYNTPEGERKQETEWFTVVAWNK 60
Query: 65 GLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQ 113
L + ++L KG+ +YV G+L + D + VIA V F +
Sbjct: 61 -LAEQCNQFLSKGRLVYVEGRLRTRSWEGQDNLKHYRTEVIASRVTFLE 108
>UniRef50_A0LIN0 Cluster: Single-stranded DNA-binding protein; n=2;
Deltaproteobacteria|Rep: Single-stranded DNA-binding
protein - Syntrophobacter fumaroxidans (strain DSM 10017
/ MPOB)
Length = 184
Score = 60.9 bits (141), Expect = 6e-09
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVI-NFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N+V L+GR+G DP R + I F LAT+ G+ RT+WHR+ +F L
Sbjct: 24 VNKVILVGRLGGDPDVRYTPNGMAIAKFNLATNERVPAGEGNWEDRTEWHRIVVFGK-LA 82
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPYESEQ 121
+T YL KG+ +Y+ G L + + G R + ++A D+ E +Q
Sbjct: 83 ETCGNYLSKGRLVYIEGSLRTQQWEDAQGVKRYTTEIVARDMTMLGGGAGEGQQ 136
>UniRef50_Q6AK18 Cluster: Single-stranded DNA-binding protein; n=1;
Desulfotalea psychrophila|Rep: Single-stranded
DNA-binding protein - Desulfotalea psychrophila
Length = 142
Score = 60.5 bits (140), Expect = 8e-09
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 9 INQVTLLGRVGADPQKRGSEEHP-VINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
IN+ L+G +GADP+ R + V LAT +K +SG + + T+WHRV I L
Sbjct: 2 INKAILIGNLGADPEIRSTGNGTQVATLRLATTERWKDQSGQMQESTEWHRV-IAWGRLA 60
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
+ +YL KG R+Y+ GK+ + + G R ++ ++A ++
Sbjct: 61 EICGEYLNKGARVYIEGKIQTRKWQDQSGNDRYSTEIVAREM 102
>UniRef50_Q889U1 Cluster: Single-stranded DNA-binding protein; n=23;
cellular organisms|Rep: Single-stranded DNA-binding
protein - Pseudomonas syringae pv. tomato
Length = 189
Score = 60.5 bits (140), Expect = 8e-09
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 9 INQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYK-YESGDILQRTDWHRVSIFKPGL 66
+N+V L+G G DP+ R + V N LAT + +SG +++T+WHRVS+F +
Sbjct: 5 VNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTEWHRVSMFGK-V 63
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIAD 107
+ +YL+KG ++Y+ GKL E + DG R + ++ D
Sbjct: 64 AEIAGEYLRKGSQVYIEGKLQTREWE-KDGIKRYTTEIVVD 103
>UniRef50_Q7VML3 Cluster: Single-stranded DNA-binding protein; n=1;
Haemophilus ducreyi|Rep: Single-stranded DNA-binding
protein - Haemophilus ducreyi
Length = 138
Score = 60.1 bits (139), Expect = 1e-08
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 6 ITAINQVTLLGRVGADPQKRGSEEHPVI-NFPLATHYSYKYES-GDILQRTDWHRVSIFK 63
+ +N+VT+LG +G+DP R + +AT +K ++ G+ + +WHR++ F+
Sbjct: 1 MAGVNKVTILGNLGSDPDIRAMPNGDLTATVSVATSRQWKDQTTGETKELVEWHRIAFFR 60
Query: 64 PGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTP 116
L + V +YL KG +IYV G L + D+G R + +I +++ S P
Sbjct: 61 R-LAEIVEQYLHKGSKIYVEGYLRTRKWTDDNGIDRWTTEIIGEELQMLDSKP 112
>UniRef50_Q5ZWV8 Cluster: Single-stranded DNA-binding protein; n=4;
Legionella pneumophila|Rep: Single-stranded DNA-binding
protein - Legionella pneumophila subsp. pneumophila
(strain Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 140
Score = 60.1 bits (139), Expect = 1e-08
Identities = 32/103 (31%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Query: 8 AINQVTLLGRVGADPQK-RGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
++N+V L+G +GADP+ G + + LAT+ S+K +S + R +WH++ +F G
Sbjct: 4 SLNRVQLIGNLGADPKSITGKDGQSFVTATLATNESFK-KSDEWQTRVEWHQLVLF--GK 60
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
V +YLKKG ++Y+ GKL + ++G+ +V+ + +
Sbjct: 61 LIKVAEYLKKGSQVYLEGKLRSNQWTDNEGKTHQTLSVVVNHI 103
>UniRef50_A1VC73 Cluster: Single-stranded DNA-binding protein; n=4;
Desulfovibrionaceae|Rep: Single-stranded DNA-binding
protein - Desulfovibrio vulgaris subsp. vulgaris (strain
DP4)
Length = 176
Score = 60.1 bits (139), Expect = 1e-08
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 9 INQVTLLGRVGADPQKRGSEEH-PVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N+V ++GR+G DP+ R ++ P+ N +AT SY G+ + R +WH V +F+
Sbjct: 2 LNKVMIIGRLGRDPELRYAQNGTPIANLRIATDESYVDREGNKVDRVEWHTVVVFQRAAE 61
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPYESEQ 121
+ +L KG ++V G L + + GQ R ++ + A V F ++Q
Sbjct: 62 NCA-NFLGKGSLVFVEGSLQTRKWQDQQGQDRYSTEIKAQRVQFLDRRGEAAQQ 114
>UniRef50_Q8ZJ06 Cluster: Single-stranded DNA-binding protein; n=53;
root|Rep: Single-stranded DNA-binding protein - Yersinia
pestis
Length = 182
Score = 60.1 bits (139), Expect = 1e-08
Identities = 33/101 (32%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 9 INQVTLLGRVGADPQKRGSEEH-PVINFPLATHYSYK-YESGDILQRTDWHRVSIFKPGL 66
+N+V L+G +G DP+ R V N LAT S++ ++G+ ++T+WHRV +F L
Sbjct: 6 VNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTEWHRVVLFGK-L 64
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIAD 107
+ +YL+KG ++Y+ G L + + GQ R + V+ +
Sbjct: 65 AEVAGEYLRKGSQVYIEGALQTRKWQDQSGQERYTTEVVVN 105
>UniRef50_Q8K933 Cluster: Single-stranded DNA-binding protein; n=10;
Gammaproteobacteria|Rep: Single-stranded DNA-binding
protein - Buchnera aphidicola subsp. Schizaphis graminum
Length = 162
Score = 60.1 bits (139), Expect = 1e-08
Identities = 32/101 (31%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 9 INQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYES-GDILQRTDWHRVSIFKPGL 66
+N+V L+G +G DP+ R + V+N LAT ++K ++ G+ ++T+WHR+ +F L
Sbjct: 6 VNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTEWHRIVLFGK-L 64
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIAD 107
+ +YL+KG ++Y+ G L + + +G R + VI +
Sbjct: 65 AEIAGEYLRKGSQVYIEGSLQTRKWQDQNGLERYTTEVIVN 105
>UniRef50_A5WGZ1 Cluster: Single-stranded DNA-binding protein; n=10;
Gammaproteobacteria|Rep: Single-stranded DNA-binding
protein - Psychrobacter sp. PRwf-1
Length = 230
Score = 59.3 bits (137), Expect = 2e-08
Identities = 32/103 (31%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 9 INQVTLLGRVGADPQKRG-SEEHPVINFPLATHYSYK-YESGDILQRTDWHRVSIFKPGL 66
+N+V ++G +G DP+ R S V N +AT + ++G+ + T+WHRV++F L
Sbjct: 4 VNKVIIIGNLGNDPETRQFSNGGSVTNISVATSEQWTDKQTGEKREATEWHRVTLFNR-L 62
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
+ +YL+KG ++Y+ G L + + +GQ R + + AD +
Sbjct: 63 GEIAAQYLRKGSKVYIEGSLRTRKWQDQNGQDRYTTEIRADQM 105
>UniRef50_A4BXL3 Cluster: Single-stranded DNA-binding protein; n=1;
Polaribacter irgensii 23-P|Rep: Single-stranded
DNA-binding protein - Polaribacter irgensii 23-P
Length = 144
Score = 58.8 bits (136), Expect = 3e-08
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 5/115 (4%)
Query: 8 AINQVTLLGRVG-ADPQKRGSEEHPVINFPLATHYSY-KYESGDILQRTDWHRVSIFKPG 65
++N+V L+G +G A +++ V FP+AT SY ++G+ + TDWH + + +
Sbjct: 4 SVNKVILIGNLGDAVKMHYFDDKNSVGRFPIATSESYTNKQTGEKVTTTDWHNI-VVRNK 62
Query: 66 LRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPYESE 120
L + KYL KG ++Y+ GKL + + DG R A+ VI ++ ST SE
Sbjct: 63 LAEICDKYLSKGDKVYLEGKLKNKQWE-QDGVKRYATEVIVTEITML-STQKSSE 115
>UniRef50_Q87LA3 Cluster: Single-stranded DNA-binding protein; n=68;
root|Rep: Single-stranded DNA-binding protein - Vibrio
parahaemolyticus
Length = 176
Score = 58.8 bits (136), Expect = 3e-08
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 9 INQVTLLGRVGADPQKRGSEEH-PVINFPLATHYSYKYES-GDILQRTDWHRVSIFKPGL 66
IN+V L+G +G DP+ R V N +AT S++ ++ G+ ++T+WHRV +F L
Sbjct: 6 INKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQREKTEWHRVVLFGK-L 64
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVI 105
+ +YL+KG ++YV G+L + + GQ R ++ V+
Sbjct: 65 AEVAGEYLRKGSQVYVEGQLQTRKWQDQSGQDRYSTEVV 103
>UniRef50_Q2GD12 Cluster: Single-stranded DNA-binding protein; n=1;
Neorickettsia sennetsu str. Miyayama|Rep:
Single-stranded DNA-binding protein - Neorickettsia
sennetsu (strain Miyayama)
Length = 151
Score = 58.4 bits (135), Expect = 3e-08
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 9 INQVTLLGRVGADPQKRG-SEEHPVINFPLATHYSYKYES-GDILQRTDWHRVSIFKPGL 66
IN+V L+G +G DP+ R S V F LAT ++ ++ G+ + +T+WH+V +F L
Sbjct: 2 INKVILVGNLGKDPEVRTMSNAKQVATFSLATTENWNDKNTGERVSKTEWHQVVVFNEPL 61
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVI 105
+ Y+ KG R+Y+ G L + ++G R + V+
Sbjct: 62 IKVISNYVNKGTRLYIEGSLQTRKWTDNNGIERYTTEVV 100
>UniRef50_Q9KUW2 Cluster: Single-stranded DNA-binding protein; n=23;
Proteobacteria|Rep: Single-stranded DNA-binding protein
- Vibrio cholerae
Length = 177
Score = 58.0 bits (134), Expect = 4e-08
Identities = 30/99 (30%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 9 INQVTLLGRVGADPQKRGSEEH-PVINFPLATHYSYKYES-GDILQRTDWHRVSIFKPGL 66
+N+V L+G +G DP+ R V N +AT +++ ++ G+ ++T+WHRV+++ L
Sbjct: 6 VNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTEWHRVTLYGK-L 64
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVI 105
+ +YL+KG ++Y+ G+L + + GQ R ++ V+
Sbjct: 65 AEVAGEYLRKGSQVYIEGQLQTRKWQDQSGQDRYSTEVV 103
>UniRef50_A6G1X8 Cluster: Single-stranded DNA-binding protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Single-stranded
DNA-binding protein - Plesiocystis pacifica SIR-1
Length = 198
Score = 57.6 bits (133), Expect = 6e-08
Identities = 32/108 (29%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 6 ITAINQVTLLGRVGADPQKRGSEEHPVI-NFPLATHYSYKY-ESGDILQRTDWHRVSIFK 63
+ IN+V L+G +G DP+ R ++ + +AT ++ +S ++++ T+WHRV+++
Sbjct: 1 MAGINKVILVGNLGRDPELRYTQGGTAVARLSVATTRRWRNKQSNEMVEETEWHRVTVWG 60
Query: 64 PGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIF 111
+ YL KG+++YV G+L +G R ++ +IAD V F
Sbjct: 61 Q-TAEHCNNYLSKGRQVYVEGRLQTRSYDDKEGIKRYSTEIIADTVQF 107
>UniRef50_Q6TFV9 Cluster: Single-stranded DNA-binding protein; n=2;
Enterobacteriaceae|Rep: Single-stranded DNA-binding
protein - Erwinia amylovora (Fire blight bacteria)
Length = 144
Score = 57.2 bits (132), Expect = 8e-08
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 10 NQVTLLGRVGADPQKRGSEEHPVI-NFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRD 68
N+V L+GR G D + R + I + LAT SY G + T+WH + IF +
Sbjct: 7 NKVILMGRAGKDAEVRYTPNGTAIASLTLATEISYSDNEGKEQKETEWHDIVIFGKKA-E 65
Query: 69 TVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADD 108
KY KKG +Y G++ + + DG++R+ ++ D+
Sbjct: 66 AAGKYFKKGMMLYFVGRIRNNKWQGTDGKMRSNKEIVIDN 105
>UniRef50_A1ZRR4 Cluster: Single-stranded DNA-binding protein;
n=1; Microscilla marina ATCC 23134|Rep: Single-stranded
DNA-binding protein - Microscilla marina ATCC 23134
Length = 152
Score = 57.2 bits (132), Expect = 8e-08
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 6 ITAINQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPG 65
+ + N++ L+G +G DP R E V NF +A + Y +TDW RVS F
Sbjct: 1 MASYNKIILIGHLGDDPAVRDFEGRKVANFSIAVN---AYTKPGEEPKTDWFRVS-FWGN 56
Query: 66 LRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVR 99
+ V KYL+KG ++YV G+LS + GQ R
Sbjct: 57 NAEVVEKYLRKGNQVYVEGRLSTRTYTDNTGQTR 90
>UniRef50_Q8A7M7 Cluster: Single-stranded DNA-binding protein; n=9;
Bacteroidales|Rep: Single-stranded DNA-binding protein -
Bacteroides thetaiotaomicron
Length = 161
Score = 57.2 bits (132), Expect = 8e-08
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 8 AINQVTLLGRVGADPQ-KRGSEEHPVINFPLAT-HYSYKYESG-DILQRTDWHRVSIFKP 64
++N+V L+G VG DP+ K V FPLAT Y +G I +RT+WH + +
Sbjct: 2 SVNKVILIGNVGQDPRVKYFDTGSAVATFPLATTDRGYTLANGTQIPERTEWHNI-VASN 60
Query: 65 GLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
L + V KY+ KG ++Y+ GK+ G +R + + D++
Sbjct: 61 RLAEIVDKYVHKGDKLYLEGKIRTRSYSDQSGAMRYITEIFVDNM 105
>UniRef50_P28043 Cluster: Plasmid-derived single-stranded
DNA-binding protein; n=30; root|Rep: Plasmid-derived
single-stranded DNA-binding protein - Escherichia coli
Length = 179
Score = 56.8 bits (131), Expect = 1e-07
Identities = 29/85 (34%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 4 ICITAINQVTLLGRVGADPQKRG-SEEHPVINFPLATHYSYK-YESGDILQRTDWHRVSI 61
+ + IN+V L+GR+G DP+ R V N +AT +++ ++G + ++T+WHRV +
Sbjct: 1 MAVRGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGKMREQTEWHRVVL 60
Query: 62 FKPGLRDTVYKYLKKGQRIYVTGKL 86
F L + +YL+KG ++Y+ G+L
Sbjct: 61 FGK-LAEVAGEYLRKGAQVYIEGQL 84
>UniRef50_A7M293 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 183
Score = 56.4 bits (130), Expect = 1e-07
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 8 AINQVTLLGRVGADPQ-KRGSEEHPVINFPLAT-HYSYKYESG-DILQRTDWHRVSIFKP 64
++N+V L+G VG DP+ K V FPLAT Y +G I +RT+WH + +
Sbjct: 26 SVNRVILVGNVGQDPRVKYFDTGSAVATFPLATTDRGYTLANGTQIPERTEWHNI-VASN 84
Query: 65 GLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
L + V KY+ KG ++Y+ GK+ G +R + + D++
Sbjct: 85 RLAEIVDKYVHKGDKLYLEGKIRTRSYSDQSGAMRYITEIYVDNM 129
>UniRef50_Q5PB52 Cluster: Single-stranded DNA-binding protein; n=9;
Rickettsiales|Rep: Single-stranded DNA-binding protein -
Anaplasma marginale (strain St. Maries)
Length = 179
Score = 55.6 bits (128), Expect = 2e-07
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 3 YICITAINQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYE-SGDILQRTDWHRVS 60
Y+ +N+V L+G +G DP R + + +F LAT S+ + SG ++T+WH +
Sbjct: 11 YMSSLGVNKVILIGHLGKDPDVRVMQNGKEMASFSLATSESWLDKASGARTEKTEWHSIV 70
Query: 61 IFKPGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVI 105
+F GL V +KG ++Y+ G L + +G R + V+
Sbjct: 71 VFSEGLVRVVKTCARKGSKVYIEGSLRTRKWSDQNGNDRYTTEVV 115
>UniRef50_A5URI9 Cluster: Single-stranded DNA-binding protein; n=2;
Chloroflexi (class)|Rep: Single-stranded DNA-binding
protein - Roseiflexus sp. RS-1
Length = 176
Score = 55.6 bits (128), Expect = 2e-07
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
Query: 9 INQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYESGDILQR--TDWHRVSIFKPG 65
+N+V L G +GADP+ R + + V F +A++ S+K SGD +Q T+W R+ +
Sbjct: 5 LNKVMLTGHLGADPEMRFTPQGSAVTTFRVASNRSWK--SGDGVQHDDTEWFRIVAWDK- 61
Query: 66 LRDTVYKYLKKGQRIYVTGKL-SYGEVKLDDGQVRTASTVIADDVI 110
L + +YLKKG R+Y+ G+L + + G+ R + V+A D+I
Sbjct: 62 LAEICNEYLKKGTRVYIEGRLQTRSWDDRNTGEKRYITEVVAQDMI 107
>UniRef50_Q01NH0 Cluster: Single-stranded DNA-binding protein; n=1;
Solibacter usitatus Ellin6076|Rep: Single-stranded
DNA-binding protein - Solibacter usitatus (strain
Ellin6076)
Length = 162
Score = 55.2 bits (127), Expect = 3e-07
Identities = 33/102 (32%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 8 AINQVTLLGRVGADPQKRGSEEHPVIN-FPLATHYSYK-YESGDILQRTDWHRVSIFKPG 65
++N+V LLGR+G D + + + I+ F LAT+ S K +SG+ + TDWH + +++
Sbjct: 5 SVNKVFLLGRLGKDAETKFTPSGLSISKFTLATNRSTKDQQSGEWKELTDWHNIVVWRT- 63
Query: 66 LRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIAD 107
+ V +L KG+++YV G+L + +GQ + + VI +
Sbjct: 64 --EHVANFLLKGKQVYVEGRLETRSYEDKEGQKKYFTEVICE 103
>UniRef50_P34496 Cluster: Uncharacterized protein PAR2.1; n=2;
Caenorhabditis|Rep: Uncharacterized protein PAR2.1 -
Caenorhabditis elegans
Length = 170
Score = 55.2 bits (127), Expect = 3e-07
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 8 AINQVTLLGRVGADP-QKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
++N+V L+G V DP K G P + F + T+ +K + G L +T+ H VS+F
Sbjct: 53 SVNKVELVGGVALDPLYKTGRNGKPYLIFNIITNSYFKQQDGTTLDQTERHAVSVFGK-Q 111
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRT 100
+ + K +KKG R+ V G+L Y + D+ RT
Sbjct: 112 AEILSKTIKKGSRLMVQGRLHYSGGQKDEQGNRT 145
>UniRef50_Q847G1 Cluster: Single-stranded DNA-binding protein; n=6;
Gammaproteobacteria|Rep: Single-stranded DNA-binding
protein - Pseudomonas putida
Length = 161
Score = 54.4 bits (125), Expect = 5e-07
Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 9 INQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYK-YESGDILQRTDWHRVSIFKPGL 66
+N+V L+G G DP+ R + V N LAT + ++G +++T+ HRVS+F +
Sbjct: 5 VNKVILIGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTERHRVSLFGK-V 63
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIAD 107
+ +YL+KG ++Y+ GKL E + DG R + ++ D
Sbjct: 64 AEIAGEYLRKGSQVYIEGKLQTREWE-KDGIKRYTTEIVVD 103
>UniRef50_A0L314 Cluster: Single-stranded DNA-binding protein; n=1;
Shewanella sp. ANA-3|Rep: Single-stranded DNA-binding
protein - Shewanella sp. (strain ANA-3)
Length = 175
Score = 53.2 bits (122), Expect = 1e-06
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 8 AINQVTLLGRVGADPQ-KRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
++N+V ++G +G + K V NF +AT ++K + G + TDWH++ ++ L
Sbjct: 3 SVNKVIIVGNIGQEIDFKTLPSGTSVANFSVATSDTWKDQQGVQQEVTDWHKIVVWGK-L 61
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIAD 107
+ + +Y KG+++Y+ GK + K +GQ R + V+ D
Sbjct: 62 AEIINQYGGKGRQVYIEGKQKTRKYKDANGQERYTTEVVVD 102
>UniRef50_A0GYZ2 Cluster: Single-stranded DNA-binding protein; n=2;
Chloroflexi (class)|Rep: Single-stranded DNA-binding
protein - Chloroflexus aggregans DSM 9485
Length = 133
Score = 52.8 bits (121), Expect = 2e-06
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 9 INQVTLLGRVGADPQ-KRGSEEHPVINFPLATHY-SYKYESGDILQRTDWHRVSIFKPGL 66
+N+V L+GR+GADP+ K+ V F LAT+ + G T+W V ++ L
Sbjct: 15 MNRVELIGRLGADPELKQVGNGVTVCRFNLATNRPGGNDDQGHRTSETEWTTVEAWE-RL 73
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVK-LDDGQVRTASTVIADDVIF 111
+ YL+KG+R+ V G L + + + GQ+R + V AD+VIF
Sbjct: 74 AEVCGNYLQKGRRVMVMGSLRTDKWQDSESGQMRWRTYVRADEVIF 119
>UniRef50_A4TUK7 Cluster: Single-stranded DNA-binding protein; n=2;
Magnetospirillum gryphiswaldense|Rep: Single-stranded
DNA-binding protein - Magnetospirillum gryphiswaldense
Length = 232
Score = 52.4 bits (120), Expect = 2e-06
Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 8 AINQVTLLGRVGADPQKR---GSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKP 64
A+N V L GR+G + G + V +F LA SYK +G +TDW RV F P
Sbjct: 116 AMNMVHLAGRLGGHADIKTLPGHDGGKVASFSLAADRSYKDSAGQWQNKTDWLRVVTFTP 175
Query: 65 GLRDTVY-KYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIAD 107
L D V K +G+ + V G L E DG++R + + D
Sbjct: 176 SLIDKVLAKTATQGRLMLVQGSLRSREWADSDGEIRHSVEIEVD 219
Score = 41.1 bits (92), Expect = 0.005
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 10 NQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRDT 69
N + + GR+GAD + + V LA +++K +G T W R+ + P L D
Sbjct: 5 NTIMITGRLGADAEIKTLPNGKVATLSLAVDHNFKNRAGKWQTETSWFRIVTYLPWLIDN 64
Query: 70 VY-KYLKKGQRIYVTGKL 86
V KG+ +++ G L
Sbjct: 65 VLTSEATKGRMMFIHGAL 82
>UniRef50_P44409 Cluster: Single-stranded DNA-binding protein; n=31;
Proteobacteria|Rep: Single-stranded DNA-binding protein
- Haemophilus influenzae
Length = 168
Score = 52.4 bits (120), Expect = 2e-06
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 6 ITAINQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYK-YESGDILQRTDWHRVSIFK 63
+ IN+V ++G +G DP+ R V N +AT S+ +G+ + T+WHR+ +F
Sbjct: 1 MAGINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERREVTEWHRI-VFY 59
Query: 64 PGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIAD 107
+ +YL+KG ++YV G+L + + +GQ R + + D
Sbjct: 60 RRQAEICGEYLRKGSQVYVEGRLKTRKWQDQNGQDRYTTEIQGD 103
>UniRef50_O85903 Cluster: Single strand binding protein; n=16;
Alphaproteobacteria|Rep: Single strand binding protein -
Sphingomonas aromaticivorans
Length = 111
Score = 52.0 bits (119), Expect = 3e-06
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Query: 10 NQVTLLGRVGADPQKRGSEEHPVINFPLATHY-------SYKYESGDILQRTDWHRVSIF 62
N V L+GR+ + P+ R + E + +F L T + K E+G ++HR++ F
Sbjct: 3 NLVILIGRIASAPETRHAGETAITSFTLVTDRPKLVDGKTVKNEAGYTETIPEFHRITAF 62
Query: 63 KPGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIF 111
GL +V K+ KKG + V G+L Y + +G R A +++++V+F
Sbjct: 63 N-GLGTSVAKHKKKGDLVEVQGRLHYSKWTDREGVERYAVEIVSEEVLF 110
>UniRef50_A0Q470 Cluster: Single-stranded DNA-binding protein; n=11;
Francisella tularensis|Rep: Single-stranded DNA-binding
protein - Francisella tularensis subsp. novicida (strain
U112)
Length = 159
Score = 52.0 bits (119), Expect = 3e-06
Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 7/104 (6%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVI-NFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N+V LLGR+G DP+ R ++ V+ +AT+ G+ + T+WHRV IF
Sbjct: 6 VNKVILLGRLGNDPEVRTTQNGTVVATLSIATNDG----MGENI-TTEWHRVVIFGKS-A 59
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIF 111
+ + +Y KG +I+V G+L + + +G ++ + V+A + F
Sbjct: 60 EAIQRYANKGTQIFVEGRLRTNKWQDKNGNMQYTTEVVASNFQF 103
>UniRef50_A7HKU6 Cluster: Single-strand binding protein; n=2;
Thermotogaceae|Rep: Single-strand binding protein -
Fervidobacterium nodosum Rt17-B1
Length = 136
Score = 51.6 bits (118), Expect = 4e-06
Identities = 32/103 (31%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Query: 10 NQVTLLGRVGADPQ-KRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRD 68
N+V L+GR+ DP+ K+ + + + F LA + + E+ D+ R+ F+ L +
Sbjct: 4 NKVVLVGRLTRDPETKQTLDGNLITTFTLAVNRANNGEA-------DFIRIVAFRK-LAE 55
Query: 69 TVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIF 111
+ YL+KG+ + V GKL + K +DGQ R+ + AD+++F
Sbjct: 56 LAHTYLQKGRMVLVEGKLRINKWKTNDGQSRSTPEIWADNIVF 98
>UniRef50_A4V7V9 Cluster: Single-stranded DNA-binding protein; n=1;
Pseudomonas fluorescens SBW25|Rep: Single-stranded
DNA-binding protein - Pseudomonas fluorescens SBW25
Length = 183
Score = 51.6 bits (118), Expect = 4e-06
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVINFPLATHYSY-KYESGDILQRTDWHRVSIFKPGLR 67
+N VT++G +G+DP+ + LAT S+ +SG ++ T+WHR+ + K
Sbjct: 6 VNTVTIIGTMGSDPKVQQFNNGSTTVVSLATSESWTDKQSGSKVEETEWHRI-VLKGRHA 64
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTAST-VIADD 108
D V + +KG+ +YV GKL K G V + T +I DD
Sbjct: 65 DVVAQGGRKGRDLYVVGKLK--SRKYTVGSVEKSITEIIVDD 104
>UniRef50_Q893X5 Cluster: Single-stranded DNA-binding protein; n=1;
Clostridium tetani|Rep: Single-stranded DNA-binding
protein - Clostridium tetani
Length = 122
Score = 51.2 bits (117), Expect = 5e-06
Identities = 30/105 (28%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 9 INQVTLLGRVGADPQKR--GSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
+N+V L+GR+ D + R G E PV+N LA Y +G+ + D+ VS ++
Sbjct: 2 MNKVMLIGRLAKDSELRYVGVENKPVLNLTLAVQRPYLNSNGE--KDVDFIPVSYWRRAA 59
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIF 111
+ ++ YLKKG+ I + G+++ ++ +DG R + + ++++ F
Sbjct: 60 -EALHPYLKKGKLISIMGRVNIRVLEREDGTKRYITQITSEEIQF 103
>UniRef50_A4NIF7 Cluster: Single-stranded DNA-binding protein; n=5;
Haemophilus influenzae|Rep: Single-stranded DNA-binding
protein - Haemophilus influenzae PittAA
Length = 144
Score = 51.2 bits (117), Expect = 5e-06
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 10 NQVTLLGRVGADPQKRGSEEH-PVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRD 68
N V L+G +G+DP+ R + + F LA Y+ G+ ++RT W + + D
Sbjct: 6 NTVILVGHLGSDPEIRQFQNGGQIATFNLAIGDDYRDRQGNTVKRTHWIPI-VVHGNSAD 64
Query: 69 TVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTV 104
+YL+KG +I VTGKL + +G RTA V
Sbjct: 65 VARQYLQKGSKICVTGKLVQESWQDQNGNNRTALKV 100
>UniRef50_Q6YPS0 Cluster: Single-stranded DNA-binding protein; n=20;
Candidatus Phytoplasma|Rep: Single-stranded DNA-binding
protein - Onion yellows phytoplasma
Length = 114
Score = 50.8 bits (116), Expect = 7e-06
Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 14/116 (12%)
Query: 9 INQVTLLGRVGADPQKR----GSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKP 64
+N+V L+GR+ D +K+ +E+ P I+F LA + + + T + +F+
Sbjct: 2 LNKVQLIGRLSHDLEKQYINSNNEQIPKIDFQLAVN---------LKEITQFIPCVVFRK 52
Query: 65 GLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPYESE 120
D + KYL KG +IY+ G LS + ++GQ + + VI +VIFF + P +++
Sbjct: 53 QA-DNMKKYLHKGSKIYLEGILSIQKYMNNEGQTKINTKVILQNVIFFDNKPLDNK 107
>UniRef50_Q01P66 Cluster: Single-stranded DNA-binding protein;
n=1; Solibacter usitatus Ellin6076|Rep: Single-stranded
DNA-binding protein - Solibacter usitatus (strain
Ellin6076)
Length = 129
Score = 50.8 bits (116), Expect = 7e-06
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRD 68
+N++TL+G +G+D +++ + + F LAT S+K ++G RT+WHR F G
Sbjct: 3 LNRITLIGFIGSDAERKAANTTKIAIFSLATKTSWKNDAGSWESRTEWHRCVAF--GKLA 60
Query: 69 TVYKYLKKGQRIYVTGKL 86
L KG + V G+L
Sbjct: 61 DFAGTLSKGAHVAVEGEL 78
>UniRef50_Q1GW29 Cluster: Single-stranded DNA-binding protein; n=9;
Sphingomonadales|Rep: Single-stranded DNA-binding
protein - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 140
Score = 50.0 bits (114), Expect = 1e-05
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 10 NQVTLLGRVGADPQKRGSEEHPVI-NFPLATHY-------SYKYESGDILQRTDWHRVSI 61
N V L+GR+ DP+ R ++ I + + T +YK ++G + +++HR++
Sbjct: 14 NLVILVGRIARDPETRTTQGGTSITSISVVTDRPARKDGKTYKDKNGYTAKDSEFHRITC 73
Query: 62 FKPGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIF 111
F GL V KY KGQ + V G++ Y + + G R +IAD V F
Sbjct: 74 FN-GLSQNVAKYCTKGQLVTVEGRIHYTQWEDQSGAKRYGCEIIADKVDF 122
>UniRef50_Q4AH46 Cluster: Single-stranded DNA-binding protein; n=1;
Chlorobium phaeobacteroides BS1|Rep: Single-stranded
DNA-binding protein - Chlorobium phaeobacteroides BS1
Length = 148
Score = 49.6 bits (113), Expect = 2e-05
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 6 ITAINQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYK-YESGDILQRTDWHRVSIFK 63
+ +N+V L+GR+G DP+ ++ I+F LAT SY+ S + +T+WH +
Sbjct: 1 MAGLNKVILIGRIGKDPEIYTFDDGTKKISFSLATTESYRDRTSNEWKDQTEWHNI---- 56
Query: 64 PGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
G R K + KG IYV GK+ + DG + + ++++ +
Sbjct: 57 VGYRYLADKSVAKGDLIYVEGKIKNRKYNDRDGNEKYITEILSEKI 102
>UniRef50_Q6Q8W0 Cluster: Predicted single-stranded DNA-binding
protein; n=1; uncultured marine gamma proteobacterium
EBAC20E09|Rep: Predicted single-stranded DNA-binding
protein - uncultured marine gamma proteobacterium
EBAC20E09
Length = 148
Score = 49.2 bits (112), Expect = 2e-05
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 8 AINQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYES-GDILQRTDWHRVSIFKPGL 66
++N+V L+G + DP+ +E + +AT+ K +S G+ ++H V+ F L
Sbjct: 4 SVNKVILVGNLTRDPETSYRQELAIAKLGIATNERRKDQSTGEWKDMPEFHNVTFFGK-L 62
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGE-VKLDDGQVRTASTVIADDVIFFQSTP 116
+ V KYLKKG +IYV G L + G + + VI ++++ P
Sbjct: 63 GEIVEKYLKKGSKIYVEGSLRTSSWDDKETGVKKYRTEVIGNELLMLGGNP 113
>UniRef50_Q9WZ73 Cluster: Single-stranded DNA-binding protein; n=2;
Thermotoga|Rep: Single-stranded DNA-binding protein -
Thermotoga maritima
Length = 141
Score = 49.2 bits (112), Expect = 2e-05
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 10 NQVTLLGRVGADPQKRGS-EEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRD 68
N++ L+GR+ DP++R + PV F +A + + D Q TD+ R+ F L +
Sbjct: 5 NKIILIGRLVRDPEERYTLSGTPVTTFTIAVDRVPRKNAPDDAQTTDFFRIVTFGR-LAE 63
Query: 69 TVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPYES 119
YL KG+ + V G++ + G+ R + V+A+ V F P E+
Sbjct: 64 FARTYLTKGRLVLVEGEMRMRRWETPTGEKRVSPEVVANVVRFMDRKPAET 114
>UniRef50_Q8R6M2 Cluster: Single-stranded DNA-binding protein; n=13;
Firmicutes|Rep: Single-stranded DNA-binding protein -
Thermoanaerobacter tengcongensis
Length = 150
Score = 48.4 bits (110), Expect = 4e-05
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 9 INQVTLLGRVGADPQKR-GSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N+V L+GR+ DP R S+ PV F LA + +Y +SG+ + TD+ + ++ L
Sbjct: 2 LNKVILIGRLTKDPVMRYTSDMVPVTTFTLAVNRNYVSQSGE--RPTDFIPIVTWRK-LA 58
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQ 113
+ LKKG+ + VTG + G + V+ADDV F +
Sbjct: 59 EICANNLKKGRLVAVTGSIQTRTWDDSSGNRHWVTEVVADDVRFLE 104
>UniRef50_Q03G53 Cluster: Single-stranded DNA-binding protein;
n=2; Pediococcus pentosaceus ATCC 25745|Rep:
Single-stranded DNA-binding protein - Pediococcus
pentosaceus (strain ATCC 25745 / 183-1w)
Length = 132
Score = 48.0 bits (109), Expect = 5e-05
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 9 INQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+ Q+T+ G +G D Q ++ + V NF +A + +G+ TDW R S++ G R
Sbjct: 1 MRQITISGNIGNDVQVNSTQSGNKVANFNVAVRQNRPDNNGEY--GTDWFRCSVW--GTR 56
Query: 68 -DTVYKYLKKGQRIYVTGKLSYGE 90
TV K+ KKG + VTG LS E
Sbjct: 57 ASTVEKFYKKGSHVVVTGSLSINE 80
>UniRef50_A5UU58 Cluster: Single-stranded DNA-binding protein; n=3;
Chloroflexaceae|Rep: Single-stranded DNA-binding protein
- Roseiflexus sp. RS-1
Length = 138
Score = 48.0 bits (109), Expect = 5e-05
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 9 INQVTLLGRVGADPQKRGSEE-HPVINFPLAT-HYSYKYESGDILQRTDWHRVSIFKPGL 66
+N V L+G +G P+ R V F +AT H + E+G+ TDW + + L
Sbjct: 8 VNTVELIGWLGDTPEMRSFPSGSSVCLFNVATKHLGARSENGERSIETDWTLIEAWNK-L 66
Query: 67 RDTVYKYLKKGQRIYVTGKL-SYGEVKLDDGQVRTASTVIADDVIFFQSTP 116
+ +YL KG R+ + G L ++ + G R + V AD+V+F S P
Sbjct: 67 GEQCMRYLHKGSRVRIVGSLRTHSWSDRETGLHRHRTFVRADEVLFLDSRP 117
>UniRef50_Q1B002 Cluster: Single-stranded DNA-binding protein; n=1;
Rubrobacter xylanophilus DSM 9941|Rep: Single-stranded
DNA-binding protein - Rubrobacter xylanophilus (strain
DSM 9941 / NBRC 16129)
Length = 141
Score = 47.6 bits (108), Expect = 6e-05
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 6 ITAINQVTLLGRVGADPQKR-GSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKP 64
+ + N+V L G + DP+ R S+ PV +F +A + + S + + D+ VS ++
Sbjct: 1 MVSFNRVILAGNLTRDPELRFTSDGVPVCSFGIAVN---RVRSRN--EEVDFFDVSAWRE 55
Query: 65 GLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIF 111
L +T+ Y KKG I + G+L Y + DG R+ ++AD+V F
Sbjct: 56 -LGETIANYKKKGDPILIEGRLQYRTWEAQDGTRRSKVDIVADNVQF 101
>UniRef50_A6GVS9 Cluster: Single-stranded DNA-binding protein; n=1;
Flavobacterium psychrophilum JIP02/86|Rep:
Single-stranded DNA-binding protein - Flavobacterium
psychrophilum (strain JIP02/86 / ATCC 49511)
Length = 126
Score = 47.6 bits (108), Expect = 6e-05
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Query: 7 TAINQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPG 65
T N+V L+G VG DP+ + E + +AT+ SY + + + T WH ++ +
Sbjct: 18 TLRNKVQLIGNVGNDPEIKILEGGKKLAKLTIATNESYYNDKNEKVTDTQWHNLTAWGK- 76
Query: 66 LRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQS 114
+ + ++ KG+ I V GKL++ DG R + V+ ++++ S
Sbjct: 77 TAEIIESFVTKGKEIAVEGKLTHRNYDDKDGIKRYYTEVVVNELLLLGS 125
>UniRef50_A4XJ53 Cluster: Single-stranded DNA-binding protein; n=2;
Clostridiales|Rep: Single-stranded DNA-binding protein -
Caldicellulosiruptor saccharolyticus (strain ATCC 43494
/ DSM 8903)
Length = 160
Score = 47.6 bits (108), Expect = 6e-05
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
Query: 9 INQVTLLGRVGADPQKRGSEEH-PVINFPLATHYSYKYES---GDILQRTDWHRVSIFKP 64
+N+V L+GR+ DP+ R + + PV NF LA + ++ E+ D + W R++ F
Sbjct: 1 MNKVILMGRLTRDPEFRLTANNTPVANFTLAVNRRFRRENDQDADFIPIVAWSRLAEFSK 60
Query: 65 GLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTP 116
YLKKG+++ V G+L + + + VIA+++ F + P
Sbjct: 61 N-------YLKKGRQVVVIGRLQLRTWDDESNRRHYITEVIAEEIYFAEPKP 105
>UniRef50_Q1Q7I6 Cluster: Strongly similar to single-stranded
DNA-binding protein; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Strongly similar to single-stranded
DNA-binding protein - Candidatus Kuenenia
stuttgartiensis
Length = 146
Score = 46.8 bits (106), Expect = 1e-04
Identities = 29/108 (26%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 6 ITAINQVTLLGRVGADPQKRGSEEH-PVINFPLATHYSYKYESGDILQRTDWHRVSIFKP 64
+ ++N+V L+G + DP+ R + V +F +A + ++G+ + VS+F
Sbjct: 1 MASLNKVFLMGNLTRDPELRYTAGGLAVASFAIAVSSKWTSKTGEQKDEVCFVDVSMF-- 58
Query: 65 GLR-DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIF 111
G R + + +Y KG I++ G+L + + + +GQ R+ V+AD+ F
Sbjct: 59 GRRAEVIGEYFSKGSPIFIEGRLQFNQWETKEGQKRSTLRVVADNFQF 106
>UniRef50_A3I0F7 Cluster: Single-stranded DNA-binding protein; n=12;
Bacteroidetes|Rep: Single-stranded DNA-binding protein -
Algoriphagus sp. PR1
Length = 225
Score = 46.8 bits (106), Expect = 1e-04
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 7 TAINQVTLLGRVGADPQKRGSEEHPVIN-FPLATHYSYKYESGDILQRTDWHRVSIFKPG 65
T N+V L+GR+G+ + + + + +AT+ YK + G+ ++ T WH + +
Sbjct: 101 TLRNRVQLIGRLGSKIEIKNLDGGKTLGKVSMATNEYYKNQKGERVEETTWHNIVAWGK- 159
Query: 66 LRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVI 110
D + KY KG I + KLS + +G R S V+ ++
Sbjct: 160 QADLLDKYTDKGSEIAIEDKLSNRSYEDKEGNKRYISEVVVQSIL 204
>UniRef50_A5MCC1 Cluster: Single-stranded DNA-binding protein; n=1;
Streptococcus pneumoniae SP14-BS69|Rep: Single-stranded
DNA-binding protein - Streptococcus pneumoniae SP14-BS69
Length = 138
Score = 46.4 bits (105), Expect = 1e-04
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 9 INQVTLLGRVGADPQKRGSEEH-PVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
IN VTL+GR+ A P R + + + LA + ++K E+G+ + D+ ++ G
Sbjct: 2 INNVTLVGRLVAPPDLRKTPNNVSSLQGTLAVNRNFKNENGE--READFINFQAWR-GTA 58
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQS 114
D + +Y KG I + G+L + DGQ R + VIA+ V +S
Sbjct: 59 DIIAQYCSKGSLIGIIGRLQVRSYE-KDGQRRYVTEVIAESVALLES 104
>UniRef50_Q8XH44 Cluster: Single-stranded DNA-binding protein; n=12;
root|Rep: Single-stranded DNA-binding protein -
Clostridium perfringens
Length = 150
Score = 46.4 bits (105), Expect = 1e-04
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 9 INQVTLLGRVGADPQKR--GSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
+N+V L+GR+ DP+ R V F LA + +K + D + ++ K G
Sbjct: 1 MNKVVLIGRLTKDPELRFAAGSGTAVARFTLAVNRQFKKDEADFISC-----IAFGKTG- 54
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQS 114
+T+ +Y+ KG+++ V+G + G + DG R + V+ + F S
Sbjct: 55 -ETIAQYITKGRQLAVSGNIRTGSYEAQDGTRRYTTDVVVESFDFIDS 101
>UniRef50_Q8VRC5 Cluster: Single-stranded DNA-binding protein;
n=2; Haemophilus influenzae biotype aegyptius|Rep:
Single-stranded DNA-binding protein - Haemophilus
influenzae biotype aegyptius
Length = 141
Score = 46.0 bits (104), Expect = 2e-04
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 10 NQVTLLGRVGADPQ-KRGSEEHPVINFPLATHYSYK-YESGDILQRTDWHRVSIFKPGLR 67
N V LLG VG DP+ S+ + + LAT SYK +S + + DWH + + +
Sbjct: 6 NLVILLGNVGNDPEIAEFSDGNLQASLSLATTLSYKPKDSEEWKESVDWHNIRAYGSAAK 65
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLD 94
T+ Y++KG +I V G L + D
Sbjct: 66 -TIANYVRKGHKIEVVGVLKNNNYEKD 91
>UniRef50_A1HSI9 Cluster: Single-stranded DNA-binding protein; n=2;
Thermosinus carboxydivorans Nor1|Rep: Single-stranded
DNA-binding protein - Thermosinus carboxydivorans Nor1
Length = 134
Score = 46.0 bits (104), Expect = 2e-04
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Query: 9 INQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N+V L+GR+ DP+ R ++ V +F LA + +Y S Q+TD+ + ++ L
Sbjct: 1 MNKVILVGRLAQDPEVRYTQTGKAVASFNLAVN---RYVSQG-QQQTDFIPIVAWER-LA 55
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQ 113
+T L KGQRI V G+L + DGQ R + V+A + F +
Sbjct: 56 ETCGNNLTKGQRILVEGRLQIRSYETADGQKRRVAEVVALSIEFLE 101
>UniRef50_Q8F5K5 Cluster: Single-stranded DNA-binding protein; n=4;
Leptospira|Rep: Single-stranded DNA-binding protein -
Leptospira interrogans
Length = 150
Score = 45.2 bits (102), Expect = 3e-04
Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIF-KPGLR 67
IN+VTL+GR DP+ + ++NF LA +Y +G+ + + + ++ KP
Sbjct: 5 INRVTLVGRFTRDPEFKSINGTSLVNFSLANGRTY-VSNGEKREESHFFDCEVWGKPA-- 61
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADD 108
D + +Y KKG++I + G+L + +G+ + ++ ++
Sbjct: 62 DIIQQYCKKGKQIAIEGRLKQDTWETPEGKKASRIRIVVEN 102
>UniRef50_Q9EZL8 Cluster: Single-stranded DNA-binding protein; n=14;
Bacteroidetes|Rep: Single-stranded DNA-binding protein -
Cytophaga johnsonae (Flavobacterium johnsoniae)
Length = 146
Score = 45.2 bits (102), Expect = 3e-04
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVIN-FPLATHYSY-KYESGDILQRTDWHRVSIFKPGL 66
+N+V L+G +G D + + I F LAT+ Y + + + T+WH + + +
Sbjct: 5 LNKVMLIGHLGDDVKMHYFDGGNCIGRFQLATNEVYINKTTNEKITSTEWHNL-VVRNKA 63
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIF 111
+ KYL KG +IYV G++ + + +DG + + + + F
Sbjct: 64 AEICEKYLSKGDKIYVEGRIKSRQWQAEDGTTKYTTEIQVTEFTF 108
>UniRef50_Q0F348 Cluster: Single-strand binding protein; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Single-strand
binding protein - Mariprofundus ferrooxydans PV-1
Length = 118
Score = 44.8 bits (101), Expect = 4e-04
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Query: 10 NQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRDT 69
NQV + G + + ++E +F LA + SY+ E ++ Q T W RV F
Sbjct: 4 NQVIIEGNIA---NIKVNDEGTFASFSLAYNRSYRDEGDEVTQETHWFRVVGF-THTAGY 59
Query: 70 VYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPYESEQ 121
+ + L +G ++ V G L+ + K D+G VR + ++AD + +S Q
Sbjct: 60 ISRNLVQGDKVLVFGHLNTSQFKGDEGDVR-LTQIVADSIRILYRKGEQSNQ 110
>UniRef50_A1IBI8 Cluster: Single-stranded DNA-binding protein; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep:
Single-stranded DNA-binding protein - Candidatus
Desulfococcus oleovorans Hxd3
Length = 120
Score = 44.8 bits (101), Expect = 4e-04
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 9 INQVTLLGRVGADPQKRGSEEHP--VINFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
+N VTL G +G+D + + + + +F LA +K D ++T W +V F L
Sbjct: 2 LNVVTLAGNIGSDIENFFTPDGGTHIASFSLAFASGFK----DGQEQTGWIKVKCFSK-L 56
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPYESE 120
DT YL KG RI V+G L + ++ + R++ + A+ + F + E E
Sbjct: 57 ADTAENYLHKGARIAVSGYLQQQRWETENNEKRSSYQLNANSIEFIRINDKEEE 110
>UniRef50_Q6BT23 Cluster: Similar to tr|O74715 Candida parapsilosis
Telomere-binding protein; n=4; Saccharomycetaceae|Rep:
Similar to tr|O74715 Candida parapsilosis
Telomere-binding protein - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 132
Score = 44.8 bits (101), Expect = 4e-04
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 7 TAINQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
+A ++ LLG VG+ + + IN+ LA + ES + TDW+ +S+F
Sbjct: 16 SAFAKMNLLGTVGSVSSRETKDGLQFINYSLAVNRFNPNESDG--KSTDWYNISVFNERH 73
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVR---TASTVIADDVI-FFQSTPYESEQ 121
YLK G ++YV + ++ ++G+ + T+ I+ DV+ F + T ESE+
Sbjct: 74 ISFFNNYLKPGMQLYVECDVRQRQLSDENGEHKHTVTSLKQISYDVVRFAKKTEEESEE 132
>UniRef50_Q6MC71 Cluster: Single-stranded DNA-binding protein; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Single-stranded DNA-binding protein - Protochlamydia
amoebophila (strain UWE25)
Length = 158
Score = 44.4 bits (100), Expect = 6e-04
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 12 VTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRDTV 70
V + GR+G DP+ R + V F +AT++ E DI T W RV+++ L D +
Sbjct: 4 VNIAGRLGKDPEARFTPSGQKVTAFTIATNHRKGKE--DI---TIWVRVTVWGDRL-DKI 57
Query: 71 YKYLKKGQRIYVTGKLSYGEVKLD-DGQVRTASTVIADDVIFFQ-STPYESEQ 121
YLKKG + V GK++ D +G+ + + V AD + F P +EQ
Sbjct: 58 ISYLKKGSAVIVVGKMNPPSSYTDKEGRTQISLEVTADMIEFSPFGNPDRAEQ 110
>UniRef50_Q11BM6 Cluster: Single-stranded DNA-binding protein; n=1;
Mesorhizobium sp. BNC1|Rep: Single-stranded DNA-binding
protein - Mesorhizobium sp. (strain BNC1)
Length = 132
Score = 44.4 bits (100), Expect = 6e-04
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 10 NQVTLLGRVGADPQKRGSEE-HPVINFPLAT---HYS----YKYESGDILQRTDWHRVSI 61
N V L G +GADP+ R + + V NF LAT Y+ + E+G Q T+WHRV
Sbjct: 3 NIVILNGNLGADPEVRNTGNGNRVANFSLATSRPRYADGSIVRDENGRAEQDTEWHRVVA 62
Query: 62 FKPGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTP 116
F G + K + KG ++ V G+ + +G R + VIA+ I FQ+ P
Sbjct: 63 FN-GQAKSAEKCV-KGMKVLVIGRNKTQKWTDKEGVTRYTTEVIAEK-IEFQAWP 114
>UniRef50_Q8KQW1 Cluster: Single-stranded DNA-binding protein; n=5;
Gammaproteobacteria|Rep: Single-stranded DNA-binding
protein - Vibrio cholerae
Length = 139
Score = 44.0 bits (99), Expect = 8e-04
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 10 NQVTLLGRVGADPQKRGSEEHPVI-NFPLATHYSYK-YESGDILQRTDWHRVSI-----F 62
NQVTL+G VG++P+ R ++ + LAT ++ +S ++ + T+WHRV
Sbjct: 3 NQVTLIGYVGSEPETRAYPSGDLVTSISLATSEKWRDRQSNELKEHTEWHRVVFRDRGGL 62
Query: 63 KPGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPYESE 120
K GLR ++KG +++V G + DG + V AD+ + + SE
Sbjct: 63 KLGLR--AKDLIQKGAKLFVQGPQRTRSWE-KDGIKHRLTEVDADEFLLLDNVNKASE 117
>UniRef50_Q1N8V8 Cluster: Single-strand binding protein; n=2;
Sphingomonas|Rep: Single-strand binding protein -
Sphingomonas sp. SKA58
Length = 110
Score = 44.0 bits (99), Expect = 8e-04
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 10 NQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRT-------DWHRVSIF 62
N V L GR+G+D G+ + F T + ++ + WH + +F
Sbjct: 3 NTVHLTGRIGSDIGTFGNGNNGGCYFRFVTSKTKLVDNKPVKDANGYNETYDQWHNIKVF 62
Query: 63 KPGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIF 111
GL V + KKG+R+Y+ G+L Y + G + ++AD+V F
Sbjct: 63 G-GLAKAVANHKKKGERLYIRGELRYSTYE-KGGDTHEKAEIVADEVEF 109
>UniRef50_Q1QFW4 Cluster: Single-strand binding protein/Primosomal
replication protein n; n=2; Nitrobacter hamburgensis
X14|Rep: Single-strand binding protein/Primosomal
replication protein n - Nitrobacter hamburgensis (strain
X14 / DSM 10229)
Length = 242
Score = 43.6 bits (98), Expect = 0.001
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRD 68
I + TL+GRVG Q + + + +Y +K ++G W+ V+IF ++
Sbjct: 136 IAEFTLIGRVGTIKQVGKT-----VRVSICANYPFKDDNGQWKDDAHWNEVTIFTKAIQS 190
Query: 69 TVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTV 104
V +++ KG ++V G+L + D +V T +
Sbjct: 191 YVSEHVSKGDLVHVRGRLRQNSYERDGQRVYTVDLI 226
>UniRef50_A7CZ07 Cluster: Single-strand binding protein; n=1;
Opitutaceae bacterium TAV2|Rep: Single-strand binding
protein - Opitutaceae bacterium TAV2
Length = 170
Score = 43.6 bits (98), Expect = 0.001
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 9 INQVTLLGRVGADPQKRGSEEH-PVINFPLATHYSYKYESGDILQRTDWHRVSIF-KPGL 66
+N+V L+G + DP+ R + P+ F LA +K ESG + + V + K G
Sbjct: 4 LNKVFLIGNLTRDPELRVTPRGTPICQFGLAISRQFKDESGQTREEATFVDVEAWGKQG- 62
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGE 90
+T+ KY+ KG+ ++V G+L + +
Sbjct: 63 -ETISKYVTKGRPLFVEGRLKFDQ 85
>UniRef50_A6NVZ6 Cluster: Single-stranded DNA-binding protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Single-stranded
DNA-binding protein - Bacteroides capillosus ATCC 29799
Length = 161
Score = 43.6 bits (98), Expect = 0.001
Identities = 32/108 (29%), Positives = 59/108 (54%), Gaps = 5/108 (4%)
Query: 9 INQVTLLGRVGADPQKRGSEEH-PVINFPLATHYSYK-YESGDILQRTDWHRVSIFKPGL 66
+N++ L+GR+ DP+ R ++ PV +F LA +K ++G+ + TD+ V ++
Sbjct: 2 LNRIILMGRLTRDPELRHTQTGTPVASFSLAVDRDFKDKQTGE--KATDFIDVVAWRQ-T 58
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQS 114
+ V ++ KG+ V G+L + DG R ++ VIA++V F S
Sbjct: 59 AEFVSRFFTKGRLAVVEGRLQIRDWTDRDGGKRRSAEVIAENVYFGDS 106
>UniRef50_A3EVU7 Cluster: Single-stranded DNA-binding protein; n=1;
Leptospirillum sp. Group II UBA|Rep: Single-stranded
DNA-binding protein - Leptospirillum sp. Group II UBA
Length = 140
Score = 43.2 bits (97), Expect = 0.001
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 10 NQVTLLGRVGADPQKRGSEEH-PVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR- 67
N+V L+G + DP+ R + + PV +F LA + Y+ E+ R D + + G +
Sbjct: 5 NKVILMGNLTRDPEVRFTRDGAPVASFTLAINNRYRQENET---REDVSYIDVVTFGKQA 61
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIF 111
D V YL+KG + V G+L + +GQ R+ V+ + F
Sbjct: 62 DLVKNYLEKGSPVLVEGRLQQRRWE-QEGQKRSKVEVVTQSITF 104
>UniRef50_A3DF53 Cluster: Single-stranded DNA-binding protein; n=1;
Clostridium thermocellum ATCC 27405|Rep: Single-stranded
DNA-binding protein - Clostridium thermocellum (strain
ATCC 27405 / DSM 1237)
Length = 134
Score = 42.7 bits (96), Expect = 0.002
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 9 INQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N+V L+GR+ DP+ R + V +F LA + + + G+ Q + V+ K G
Sbjct: 1 MNKVILMGRLTQDPELRHTTTGKAVCHFRLAVNRRFSRQ-GEQEQADFFPIVAWEKTG-- 57
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQS 114
+ Y +KGQ++ + G+L + G RT + +IAD+ F S
Sbjct: 58 EFCNNYFRKGQQVAIIGRLQNRSWNDEQGNKRTITEIIADEAYFADS 104
>UniRef50_Q3BZX5 Cluster: Single-stranded DNA-binding protein; n=1;
Xanthomonas campestris pv. vesicatoria str. 85-10|Rep:
Single-stranded DNA-binding protein - Xanthomonas
campestris pv. vesicatoria (strain 85-10)
Length = 117
Score = 42.3 bits (95), Expect = 0.002
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 11 QVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRDTV 70
+V +G V +PQ R + PV+N + + +K G +R+ H ++ + P +TV
Sbjct: 8 RVDCMGFVANEPQLRQANGTPVVNLVVIENEYWKDAEGTRKERSHAHSIAFWGP-YAETV 66
Query: 71 YKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPYESEQ 121
K ++KG + V G L Y + +GQ + I D P E ++
Sbjct: 67 SKLVQKGSYVRVKGNLRYKPI---EGQQYDKAAEIRGDDFSLLDDPRERDE 114
>UniRef50_Q9B0G2 Cluster: SsDNA binding protein; n=2; unclassified
Siphoviridae|Rep: SsDNA binding protein - Staphylococcus
phage phiSLT
Length = 147
Score = 42.3 bits (95), Expect = 0.002
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRD 68
+N V L+G + ADP+ +G + ++NF +A +K + + + TD+ R F +
Sbjct: 1 MNTVNLIGNLVADPELKGQNNN-LVNFVIAVQRPFKNKQTNEYE-TDFIRCVAFGK-TAE 57
Query: 69 TVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQ 113
+ KG +I VTG + G + + GQ + + +++ F +
Sbjct: 58 IIANNFNKGNKIGVTGSIQTGSYENNQGQKVFTTDIAVNNITFVE 102
>UniRef50_Q2TTX2 Cluster: Single-stranded DNA-binding protein;
n=1; Escherichia coli|Rep: Single-stranded DNA-binding
protein - Escherichia coli
Length = 180
Score = 41.5 bits (93), Expect = 0.004
Identities = 18/54 (33%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 34 NFPLATHYSYK-YESGDILQRTDWHRVSIFKPGLRDTVYKYLKKGQRIYVTGKL 86
N +AT +++ ++G++ ++T+WHRV +F L + +YL+KG ++Y+ G+L
Sbjct: 3 NLQVATSETWRDKQTGEMREQTEWHRVVLFGK-LAEVAGEYLRKGVQVYIEGQL 55
>UniRef50_A7JWL3 Cluster: Single-stranded DNA-binding protein; n=1;
Mannheimia haemolytica PHL213|Rep: Single-stranded
DNA-binding protein - Mannheimia haemolytica PHL213
Length = 146
Score = 41.1 bits (92), Expect = 0.005
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 32 VINFPLATHYSYKYES-GDILQRTDWHRVSIFKPGLRDTVYKYLKKGQRIYVTGKLSYGE 90
V N +AT S+ ++ G+ + T+WHR+ +F + +YL+KG ++YV G+L +
Sbjct: 3 VANISVATSESWTDKNTGERREVTEWHRI-VFYRRQAEVCGQYLRKGSQVYVEGRLKTRK 61
Query: 91 VKLDDGQVRTASTVIADDVI 110
+ +GQ R +T I DV+
Sbjct: 62 WQDQNGQDR-YTTEIQGDVL 80
>UniRef50_Q6YRK4 Cluster: Single-stranded DNA-binding protein; n=2;
Candidatus Phytoplasma asteris|Rep: Single-stranded
DNA-binding protein - Onion yellows phytoplasma
Length = 114
Score = 40.7 bits (91), Expect = 0.007
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 9 INQVTLLGRVGADPQKRGSEEHP-VINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
IN+V L+GR+ DP+ + + V+ F LA + + S ++TD+ ++F
Sbjct: 2 INKVILVGRITKDPELKNTNSGTYVVKFTLAVN---RIVSASSEKKTDFINCTVFGK-QA 57
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQS 114
+ + KY+ KG I V G + E DG ++V+ ++V F +S
Sbjct: 58 ENLEKYISKGALIGVEGNIRV-ETWEKDGVTNWQTSVVCNNVQFLES 103
>UniRef50_Q14QG0 Cluster: Single-stranded DNA-binding protein; n=1;
Spiroplasma citri|Rep: Single-stranded DNA-binding
protein - Spiroplasma citri
Length = 144
Score = 40.7 bits (91), Expect = 0.007
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 9 INQVTLLGRVGADPQKRGS-EEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N+V+L+GR+ D + + S P + F LA + ++ ++ + W++ +
Sbjct: 2 LNRVSLVGRLTRDLELKNSVNSKPFVAFTLAVNNNFNNQAS-FIPCFAWNKTA------- 53
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQS 114
+ + +YLKKG I + G+L ++ GQV T VIAD V F S
Sbjct: 54 ENMARYLKKGSLIALDGRLQTRTDNVN-GQVTTIVQVIADIVSFLDS 99
>UniRef50_A4EBT9 Cluster: Single-stranded DNA-binding protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Single-stranded
DNA-binding protein - Collinsella aerofaciens ATCC 25986
Length = 150
Score = 40.7 bits (91), Expect = 0.007
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 8 AINQVTLLGRVGADPQKRGSEEHP-VINFPLATHYSYKY-ESGDILQRTDWHRVSIFKPG 65
+IN+V + G + DP+ R + V++F +A + + ++G+ ++ ++F G
Sbjct: 2 SINRVNITGNLTRDPELRATAGGTQVLSFGVAVNDRRRNAQTGEWEDYPNFVDCTMF--G 59
Query: 66 LR-DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQS 114
R + V ++L KG ++ + GKL Y + DGQ R+ VI D++ F S
Sbjct: 60 TRAEAVSRFLAKGNKVAIEGKLRYSSWE-RDGQRRSKLEVIVDEIEFMSS 108
>UniRef50_Q5HJ26 Cluster: Prophage-derived single-stranded
DNA-binding protein; n=2; root|Rep: Prophage-derived
single-stranded DNA-binding protein - Staphylococcus
aureus (strain COL)
Length = 139
Score = 40.7 bits (91), Expect = 0.007
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVIN-FPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N+ L+GR+ DP+ R + + F LA + ++ G+ + D+ V +FK
Sbjct: 2 LNRTVLVGRLTKDPELRSTPNGVNVGTFTLAVNRTFTNAQGE--READFINVVVFKKQA- 58
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQ 113
+ V YL KG V G+L +G+ + V+AD V F +
Sbjct: 59 ENVKNYLSKGSLAGVDGRLQTRSYDNKEGRRVFVTEVVADSVQFLE 104
>UniRef50_Q6GCA6 Cluster: Single-stranded DNA-binding protein 2;
n=60; root|Rep: Single-stranded DNA-binding protein 2 -
Staphylococcus aureus (strain MSSA476)
Length = 167
Score = 40.7 bits (91), Expect = 0.007
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 9 INQVTLLGRVGADPQKRGSEEH-PVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N+V L+GR+ DP+ R + V F LA + ++ G+ + D+ +F+
Sbjct: 2 LNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGE--READFINCVVFRRQA- 58
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQ 113
D V YL KG V G+L + +G+ + V+ D V F +
Sbjct: 59 DNVNNYLSKGSLAGVDGRLQSRNYENQEGRRVFVTEVVCDSVQFLE 104
>UniRef50_A6BJZ6 Cluster: Single-stranded DNA-binding protein; n=13;
Clostridiales|Rep: Single-stranded DNA-binding protein -
Dorea longicatena DSM 13814
Length = 154
Score = 40.3 bits (90), Expect = 0.010
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 9 INQVTLLGRVGADPQKR---GSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPG 65
+N+V L+GR+ DP+ R G + + LA ++ + D Q D+ F
Sbjct: 1 MNKVILMGRLTRDPEVRYSQGENSTAIARYTLAVDRRFR-RNNDGEQTADFIGCVAFGRS 59
Query: 66 LRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQS 114
+ KY ++G ++ VTG++ G +GQ + V+ +D F +S
Sbjct: 60 A-EFAEKYFRQGLKVIVTGRIQTGSYTNKEGQKVYTTDVVVEDQEFAES 107
>UniRef50_A5FFM4 Cluster: Single-stranded DNA-binding protein;
n=1; Flavobacterium johnsoniae UW101|Rep:
Single-stranded DNA-binding protein - Flavobacterium
johnsoniae UW101
Length = 130
Score = 40.3 bits (90), Expect = 0.010
Identities = 24/88 (27%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 12 VTLLGRVGADPQKRG-SEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRDTV 70
+ ++GRV D + R S V+NF +AT+ SY+ + G+ +++T + + + + V
Sbjct: 1 MNIIGRVTKDAEVRTLSGNRQVVNFSIATNDSYRSKEGERVEQTTYFDCAYW---ISPKV 57
Query: 71 YKYLKKGQRIYVTGKLSYGEVKLDDGQV 98
+ L+KG + ++G++S K DG++
Sbjct: 58 AEILRKGTLVELSGRVSARAWKGSDGEL 85
>UniRef50_A7AU72 Cluster: Single-strand binding protein, putative;
n=1; Babesia bovis|Rep: Single-strand binding protein,
putative - Babesia bovis
Length = 224
Score = 40.3 bits (90), Expect = 0.010
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 8 AINQVTLLGRVG-ADPQKRGSEEHPVINFPLATHYSYKYESGDI-LQRTDWHRVSIFKPG 65
++N VT+ G +G D +E + + +AT+ E G + +T WH+V ++ G
Sbjct: 90 SVNTVTICGHIGFIDQPVTIAEGYKALRLAVATN-----ERGRMGTTKTQWHKVVVYGQG 144
Query: 66 LRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTA 101
D ++ + G R V G LSY + DG A
Sbjct: 145 NVDYIHNKARVGDRALVIGSLSYYTPQSTDGSTYKA 180
>UniRef50_Q81JI3 Cluster: Single-stranded DNA-binding protein; n=31;
root|Rep: Single-stranded DNA-binding protein - Bacillus
anthracis
Length = 172
Score = 40.3 bits (90), Expect = 0.010
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 9 INQVTLLGRVGADPQKRGSEEH-PVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N+V L+GR+ DP R + V F LA + ++ + G+ + D+ I++
Sbjct: 1 MNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGE--READFINCVIWRKQA- 57
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPYESEQ 121
+ V YLKKG V G+L + DG+ + V+A+ V F + EQ
Sbjct: 58 ENVANYLKKGSLAGVDGRLQTRNYEGQDGKRVYVTEVLAESVQFLEPRNGGGEQ 111
>UniRef50_Q69BA3 Cluster: Single-stranded DNA-binding protein; n=5;
Campylobacter|Rep: Single-stranded DNA-binding protein -
Campylobacter jejuni
Length = 141
Score = 39.9 bits (89), Expect = 0.013
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVI-NFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N V L+G +G D + + V LA +K E G+ T W + +F
Sbjct: 1 MNNVNLIGYLGKDFEVGTTNSGRVYAKNSLAITKRWKNERGNEESSTTWIPIVLFGKSA- 59
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVI 105
++ ++KKG + +G+LS + + +DG RT TVI
Sbjct: 60 ESASTHIKKGSQFACSGELSSNQYQDEDGNTRTMLTVI 97
>UniRef50_A5VGC6 Cluster: Single-strand binding protein/Primosomal
replication protein n; n=1; Sphingomonas wittichii
RW1|Rep: Single-strand binding protein/Primosomal
replication protein n - Sphingomonas wittichii RW1
Length = 108
Score = 39.9 bits (89), Expect = 0.013
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVI------NFPLATHYSYKYES-GDILQRTDWHRVSI 61
+N+V L GRV DPQ S PV L +Y E+ G + T++H+V+
Sbjct: 1 MNEVNLTGRVAKDPQTP-SGNGPVTLIVATDRVKLKDGKTYIDEATGYTAKTTEFHKVTC 59
Query: 62 FKPGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFF 112
F + + KKG + ++G L Y + DG R + VIAD + FF
Sbjct: 60 FNGQGKAAATR--KKGDVVAISGYLHYSSWEDRDGNARYGAEVIADRLHFF 108
>UniRef50_A6TRB9 Cluster: Single-stranded DNA-binding protein; n=1;
Alkaliphilus metalliredigens QYMF|Rep: Single-stranded
DNA-binding protein - Alkaliphilus metalliredigens QYMF
Length = 138
Score = 39.5 bits (88), Expect = 0.017
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 9 INQVTLLGRVGADPQKR--GSEEHPVINFPLATHYSY----KYESGDILQRT-DWHRVSI 61
+N V L+GR+ DP+ R V NF LA + K E + Q T D+ R+ +
Sbjct: 1 MNNVVLIGRLVRDPELRFIAGTGKAVCNFTLAVDKNLARDKKKEFEEKGQSTADFIRIIV 60
Query: 62 FKPGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPYESEQ 121
+ + +L KG+ + + G +S K G+ R ++ +IA +V F + S+Q
Sbjct: 61 WGKQAENCA-NFLAKGRLVAINGSISTSSYKTQSGETRYSTDIIASNVEFLEWGDRGSDQ 119
>UniRef50_A6Q465 Cluster: Single-stranded DNA-binding protein; n=3;
Epsilonproteobacteria|Rep: Single-stranded DNA-binding
protein - Nitratiruptor sp. (strain SB155-2)
Length = 150
Score = 39.5 bits (88), Expect = 0.017
Identities = 24/101 (23%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 10 NQVTLLGRVGADPQKRGSEEHPVI-NFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRD 68
N+V ++G + D + R + I +AT+ YK +SG+ + T + +++F +
Sbjct: 3 NKVIMVGNLTRDIELRYTGSGMAIAKSAIATNRRYKTQSGEQKEETCFIDITLFGRAA-E 61
Query: 69 TVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
+YL KG+++ + G+L Y + +G R+ ++ D++
Sbjct: 62 IANQYLSKGRKVLIEGRLVYEQWVDQNGNKRSKHSIAVDNL 102
>UniRef50_Q0LSU7 Cluster: Single-stranded DNA-binding protein; n=2;
Caulobacter sp. K31|Rep: Single-stranded DNA-binding
protein - Caulobacter sp. K31
Length = 122
Score = 39.1 bits (87), Expect = 0.022
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Query: 9 INQVTLLGRVGADPQKRG-SEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N+V L+G GA+ + R S V +AT+ Y G+ T WH+V I+ G
Sbjct: 2 LNKVQLIGFTGAEAEIRTTSGGKKVATLRVATN-RYTKAGGERKDYTTWHQVEIWNQGTV 60
Query: 68 DTV-YKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVI 105
+ K L G +++V G++ + DG R S V+
Sbjct: 61 GWLGSKALPTGSKVFVEGEIRHDRYTDKDGVERFFSKVV 99
>UniRef50_A5HYT7 Cluster: Single-stranded DNA-binding protein; n=2;
Clostridium botulinum|Rep: Single-stranded DNA-binding
protein - Clostridium botulinum A str. ATCC 3502
Length = 112
Score = 39.1 bits (87), Expect = 0.022
Identities = 24/105 (22%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPV--INFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
+N+V L+GR+ D + + E+ V + F +A + Y E+ +TD+ + ++
Sbjct: 1 MNRVMLIGRLTKDAELKQIEDRDVSLLRFVIAVNRYYNKENS----KTDYIPIVVWGRHA 56
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIF 111
+ ++KY+KKG+ I V G++ + +G + ++++++ F
Sbjct: 57 -EAIHKYMKKGKLISVVGRIQARNYEDKNGNKKYGIEIVSNEIKF 100
>UniRef50_Q7NWU0 Cluster: Single-stranded DNA-binding protein; n=2;
Proteobacteria|Rep: Single-stranded DNA-binding protein
- Chromobacterium violaceum
Length = 156
Score = 38.7 bits (86), Expect = 0.029
Identities = 29/103 (28%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
Query: 9 INQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N +T GR+ AD + R + PV++F +A+ + G+ + T+W ++ G R
Sbjct: 1 MNSITFDGRLAADAELRYTPSGEPVLSFRVASDIGF----GE-RKSTNWFSCQVW--GKR 53
Query: 68 -DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
+++ YL KGQ++ V G+L+ E + DG R + V +++
Sbjct: 54 GESLKNYLAKGQQVTVYGQLTLREWQDKDGNKRLSPDVRVNEL 96
>UniRef50_Q4HNB2 Cluster: Single-stranded DNA-binding protein; n=2;
Campylobacter|Rep: Single-stranded DNA-binding protein -
Campylobacter upsaliensis RM3195
Length = 142
Score = 38.7 bits (86), Expect = 0.029
Identities = 26/113 (23%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 10 NQVTLLGRVGADPQKRGSEEHP--VINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
N++T+LG + D + ++ V+N ++H K + +I + T + + +F +
Sbjct: 3 NKITILGNLTKDVKLTATQSGASMVLNTIASSHK--KVVNKEIKEETCFLDIVVFGK-MA 59
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPYESE 120
+ + +YL KG +++V G+++ + +G+ R + VI + + F S P E++
Sbjct: 60 ENMNQYLHKGSKVFVEGRVAQDTWQDKEGKNRYSYKVIVETMKFLDSKPSEAK 112
>UniRef50_A3IFT6 Cluster: Single-stranded DNA-binding protein; n=1;
Bacillus sp. B14905|Rep: Single-stranded DNA-binding
protein - Bacillus sp. B14905
Length = 132
Score = 38.7 bits (86), Expect = 0.029
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPV-INFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+NQV L+GR DP R + V +F LA + ++K G++ TD+ +++ L
Sbjct: 1 MNQVGLVGRFTKDPVLRYLSGNRVQTHFSLAINRNFKNSHGEV--DTDFIFCTVWGR-LA 57
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPYESEQ 121
+ + KY KG I G++ ++ + V+ +DV F+Q +S++
Sbjct: 58 EHIVKYCGKGSLIGANGRIQTRSFVNEENTKIFMTEVVVEDVRFYQLKQRDSDE 111
>UniRef50_Q8RE26 Cluster: Single-stranded DNA-binding protein; n=3;
Fusobacterium nucleatum|Rep: Single-stranded DNA-binding
protein - Fusobacterium nucleatum subsp. nucleatum
Length = 154
Score = 38.7 bits (86), Expect = 0.029
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 9 INQVTLLGRVGADPQ-KRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N V L GR+ DP+ K G F +A ++ S Q D+ F
Sbjct: 1 MNLVVLNGRLTRDPELKFGQSGKAYSRFSIAVDRPFQSSSDKNSQTADFINCVAFGK-TA 59
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIF 111
+ + +Y +KG++I + G+L + + +G+ T VIAD V F
Sbjct: 60 EFIGEYFRKGRKILLNGRLQMSQYE-SEGKKITTYVVIADSVEF 102
>UniRef50_Q8XNP5 Cluster: Single-stranded DNA-binding protein; n=4;
Clostridium|Rep: Single-stranded DNA-binding protein -
Clostridium perfringens
Length = 114
Score = 38.3 bits (85), Expect = 0.038
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 9 INQVTLLGRVGADPQKRGSE--EHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
+N++ LLGR+ DP+ R E E F +A ++K +G+ ++ D+ + +++
Sbjct: 1 MNKIVLLGRLVKDPELRYVEGGEKVYTKFTIAVARNFKSSTGE--RKKDFIPIIMWEKKA 58
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADD 108
+ KYLKKG + V+G+L + +G+ R V +D
Sbjct: 59 -EIACKYLKKGDLLSVSGRLITRSFEDTEGKRRYIVEVSVED 99
>UniRef50_A3EW22 Cluster: Single-stranded DNA-binding protein; n=1;
Leptospirillum sp. Group II UBA|Rep: Single-stranded
DNA-binding protein - Leptospirillum sp. Group II UBA
Length = 133
Score = 38.3 bits (85), Expect = 0.038
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVI-NFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N+V L+GR+G DP+ R S V LAT + K + G + DWH V L
Sbjct: 1 MNKVLLVGRIGQDPEIRFSPAGTVFARLTLATERNRKVD-GKWVSEPDWHTVIQIAKTLS 59
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVI 105
KKG + V G++ DG+ R A+ V+
Sbjct: 60 SVT---AKKGDLVAVEGEIRSRSWD-KDGEKRWATEVV 93
>UniRef50_Q899R2 Cluster: Single-stranded DNA-binding protein; n=5;
Clostridiaceae|Rep: Single-stranded DNA-binding protein
- Clostridium tetani
Length = 145
Score = 38.3 bits (85), Expect = 0.038
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 9 INQVTLLGRVGADPQKRGSEEH--PVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
+N+V L+GR+ DP+ + + V F LA + S D D+ V ++
Sbjct: 1 MNRVVLIGRLTKDPELKFTPGTGTAVTTFVLAVDRRF---SKDGKNEADFIPVVVWGKQA 57
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQ 113
T Y+ KG+ I ++G++ + DG R + V+AD+V F +
Sbjct: 58 ESTA-NYMSKGKLIGISGRIQTRSYEAKDGTRRYVTEVVADEVKFLE 103
>UniRef50_Q8E0Z9 Cluster: Single-stranded DNA-binding protein 3;
n=19; root|Rep: Single-stranded DNA-binding protein 3 -
Streptococcus agalactiae serotype V
Length = 138
Score = 38.3 bits (85), Expect = 0.038
Identities = 25/107 (23%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVI-NFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
IN + L+GR+ D + R + + + F LA + ++K +SG+ + D+ I++
Sbjct: 2 INNIVLVGRMTKDAELRYTPSNQAVATFSLAVNRNFKNQSGE--READFINCVIWRQQA- 58
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQS 114
+ + + KKG + +TG++ + GQ + V+A++ +S
Sbjct: 59 ENLANWAKKGALVGITGRIQTRNYENQQGQRIYVTEVVAENFQLLES 105
>UniRef50_Q03D48 Cluster: Single-stranded DNA-binding protein; n=1;
Lactobacillus casei ATCC 334|Rep: Single-stranded
DNA-binding protein - Lactobacillus casei (strain ATCC
334)
Length = 143
Score = 37.9 bits (84), Expect = 0.051
Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 9 INQVTLLGRVGADPQK-RGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N V+L GR+ +P+ R + E ++ F LA + +K ++G + TD+ IF G R
Sbjct: 2 LNSVSLTGRLTKEPEVFRTANELDIVRFTLAVNRVFKNKTGQ--RETDFIECVIF--GKR 57
Query: 68 DTVYK-YLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQS 114
+ KG + ++G+LS + G+ + V+ D+ + +S
Sbjct: 58 ALTFAGSTTKGSLLGISGRLSNNHFENKQGEQVWRTAVVVDNFAWLES 105
>UniRef50_Q01FS1 Cluster: Single-strand binding protein; n=2;
Ostreococcus|Rep: Single-strand binding protein -
Ostreococcus tauri
Length = 380
Score = 37.9 bits (84), Expect = 0.051
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 10 NQVTLLGRVGADPQKRGSEEHP-VINFPLATHYSYKYESGDIL---QRTDWHRVSIF-KP 64
N VT++G VGADP+ R V N LA K E D +T+W V I+ +
Sbjct: 79 NSVTIIGNVGADPEIRHFPSGTCVANVRLAVSGGRKPEMTDGAVDEDKTNWFAVDIWGEE 138
Query: 65 GLRDTVYKYLKKGQRIYVTGKLSYG-EVKLDDGQVRTASTVIADDVIFFQST 115
+R + +++ KG+ I V G L D G R+ ++A + F QS+
Sbjct: 139 AMR--MAEHVSKGKTICVQGTLKTDIWTDKDTGAPRSRVKIVAKNFSFVQSS 188
>UniRef50_A7PUL0 Cluster: Chromosome chr7 scaffold_31, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_31, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 193
Score = 37.9 bits (84), Expect = 0.051
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 10 NQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRDT 69
N V+L+G VGA + + V+ + T + + + D T W ++ F L
Sbjct: 79 NSVSLIGIVGAPVEIKHLSSGKVLAW---TRLAVRKSASD----TTWINLT-FWDELAHV 130
Query: 70 VYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQ 113
++++KGQ+IYV+G+L V+ D+G+ +T V+ + F +
Sbjct: 131 ASQHVEKGQQIYVSGRLVSDTVENDEGKQQTYYKVVVQQLNFVE 174
>UniRef50_Q4HIR4 Cluster: Single-stranded DNA-binding protein
family, putative; n=1; Campylobacter lari RM2100|Rep:
Single-stranded DNA-binding protein family, putative -
Campylobacter lari RM2100
Length = 136
Score = 37.5 bits (83), Expect = 0.067
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 9 INQVTLLGRVGADPQ-KRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N+V L G +G D + +G +E N T + K + + ++ TDW + +F
Sbjct: 1 MNEVVLCGFLGKDWEVSQGKKELLAKNSLAITTITKK--ANEEIKHTDWIPLVVFGTNRV 58
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIF 111
+ + YLKKG + G++ + ++ RT VI D+ F
Sbjct: 59 NALANYLKKGDKFLCKGRIFTSVYEDENQNKRTGFQVIVDNFEF 102
>UniRef50_Q1A0X0 Cluster: Gp101; n=2; unclassified Siphoviridae|Rep:
Gp101 - Mycobacterium phage 244
Length = 146
Score = 37.5 bits (83), Expect = 0.067
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 11 QVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYESGDILQR-TDWHRVSIFKPGLRD 68
QV L+G + ADP+ R ++ V NF + ++ + G+ + + R +I++ +
Sbjct: 6 QVHLVGTLTADPELRFTQGGQAVANFTVVSNERRRDAQGNWVDGDATFLRCTIWRDAA-E 64
Query: 69 TVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
V + L+KGQR+ V G L + +G RT V D++
Sbjct: 65 NVAESLQKGQRVIVHGYLKQRSFETKEGDKRTVIEVEVDEI 105
>UniRef50_Q8F052 Cluster: Single-stranded DNA-binding protein; n=3;
Leptospira|Rep: Single-stranded DNA-binding protein -
Leptospira interrogans
Length = 117
Score = 37.5 bits (83), Expect = 0.067
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 14/119 (11%)
Query: 9 INQVTLLGRVGADPQ-KRGSEEHPVINFPLATHYSYKY---ESGDI--LQRTDWHRVSIF 62
I + L G + +DP+ K + V F LA ++ YK E G++ ++ W R ++
Sbjct: 4 IAHIILDGNLTSDPEIKTLNSGKSVATFTLAVNHDYKSTLEEPGEVSFVEIELWDRQAV- 62
Query: 63 KPGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPYESEQ 121
++YLKKG++ V G+L K DG R+ V+ +I F P + E+
Sbjct: 63 ------NAHEYLKKGKKATVIGELRQDRWKAQDGSNRSKLKVVG-QMIRFDGLPGKKER 114
>UniRef50_A0PZ40 Cluster: Single-stranded DNA-binding protein; n=1;
Clostridium novyi NT|Rep: Single-stranded DNA-binding
protein - Clostridium novyi (strain NT)
Length = 113
Score = 37.1 bits (82), Expect = 0.089
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 9 INQVTLLGRVGADPQKRGSEEHP--VINFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
+N+V ++GR D + R +E+ V NF LA + ++G+ + D+ V ++
Sbjct: 1 MNKVIIMGRTTKDIELRQLKENNKYVCNFRLAVDRGFIDKNGEKV--VDFIPVVAWEKNA 58
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
+ + KY KG R+ + G+L + +G R S V+A ++
Sbjct: 59 -EILSKYTAKGSRVNIIGRLQIKSYETKNGDRRFMSEVVAQEI 100
>UniRef50_Q8CNK0 Cluster: Single-stranded DNA-binding protein; n=16;
Staphylococcus|Rep: Single-stranded DNA-binding protein
- Staphylococcus epidermidis (strain ATCC 12228)
Length = 131
Score = 37.1 bits (82), Expect = 0.089
Identities = 23/103 (22%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRD 68
+N++ ++GR+ D Q E++ + F +AT +YK ++ +I TD+ F
Sbjct: 2 LNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDNNEI--STDYLLCKAFGK-TAT 58
Query: 69 TVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIF 111
+ KY +G + +TG++ + + +GQ + + + + F
Sbjct: 59 NIEKYTSQGTLVGITGQMRSRKYE-KEGQTHFVTELYVETIKF 100
>UniRef50_O66475 Cluster: Single-stranded DNA-binding protein; n=1;
Aquifex aeolicus|Rep: Single-stranded DNA-binding
protein - Aquifex aeolicus
Length = 147
Score = 37.1 bits (82), Expect = 0.089
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 9 INQVTLLGRVGADPQKRGSEEH-PVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N+V ++GR+ DP PV+ F LA + YK ++G+ + + + V +
Sbjct: 2 LNKVFIIGRLTGDPVITYLPSGTPVVEFTLAYNRRYKNQNGEFQEESHFFDVKAYGKMAE 61
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
D ++ KG + V G+LS E +G+ + +IA++V
Sbjct: 62 DWATRF-SKGYLVLVEGRLSQ-EKWEKEGKKFSKVRIIAENV 101
>UniRef50_P60471 Cluster: Single-stranded DNA-binding protein; n=9;
Candidatus Phytoplasma asteris|Rep: Single-stranded
DNA-binding protein - Onion yellows phytoplasma
Length = 104
Score = 37.1 bits (82), Expect = 0.089
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 9 INQVTLLGRVGADPQKR----GSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKP 64
+N+V L+G + D +++ + P +NF LA + T + +F+
Sbjct: 2 LNKVQLIGNITHDLEQQYINTNEGKIPKVNFQLAVNNK---------DTTQFIPCVVFR- 51
Query: 65 GLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQS 114
D ++ YL KG ++YV G LS + ++ + +T++ VI VIF +
Sbjct: 52 NQADNMFMYLHKGSKVYVEGTLSIEKYINNESENKTSTKVIVQRVIFLDN 101
>UniRef50_Q49Z44 Cluster: Single-stranded DNA-binding protein; n=1;
Staphylococcus saprophyticus subsp. saprophyticus ATCC
15305|Rep: Single-stranded DNA-binding protein -
Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 /DSM 20229)
Length = 139
Score = 36.7 bits (81), Expect = 0.12
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRD 68
IN + ++GR+ DP+ EE + F +A +YK ++ + D+ F +
Sbjct: 2 INNIVIVGRLTKDPKIYDKEEKKLATFCVAVSRNYKDKNQTPV--CDYLFCKAFGK-MAT 58
Query: 69 TVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIF 111
+ KY K+G + +TG++ + + +GQ S ++ + + F
Sbjct: 59 NIEKYTKQGSLVGITGQMQSHKYE-KEGQTHFVSEILIESIKF 100
>UniRef50_Q181R6 Cluster: Single-stranded DNA-binding protein; n=1;
Clostridium difficile 630|Rep: Single-stranded
DNA-binding protein - Clostridium difficile (strain 630)
Length = 144
Score = 36.7 bits (81), Expect = 0.12
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 9 INQVTLLGRVGADPQKR--GSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
+NQV L+GR+ DP+ R PV +F +A Y + G + TD+ V +
Sbjct: 1 MNQVVLVGRLTRDPELRYIPGTGTPVASFTIAIDRDYVKKDGS--KETDFIPVEVMGKS- 57
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTV 104
+ Y+ KG+ + + G + + G+ RT + V
Sbjct: 58 AEFCANYITKGRLVALQGSIRVDNYQTQSGEKRTFTKV 95
>UniRef50_Q4ZC22 Cluster: ORF034; n=3; unclassified
Siphoviridae|Rep: ORF034 - Staphylococcus phage EW
Length = 132
Score = 36.7 bits (81), Expect = 0.12
Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 7/112 (6%)
Query: 10 NQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRDT 69
N V L GR+ D + + + + V NF +A +K + + + + +
Sbjct: 3 NSVILTGRITKDLELKPAGQTQVTNFSIAVDNPFKKDDASFFDIVAFGKTA-------EL 55
Query: 70 VYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPYESEQ 121
+ Y KG +I + G L + G R+A VIA+ V F S + Q
Sbjct: 56 LNNYCGKGSKILIEGNLKQDRFQDKQGNNRSAVRVIANRVEFLDSKGQSNNQ 107
>UniRef50_Q97KH4 Cluster: Single-stranded DNA-binding protein 1;
n=1; Clostridium acetobutylicum|Rep: Single-stranded
DNA-binding protein 1 - Clostridium acetobutylicum
Length = 110
Score = 36.7 bits (81), Expect = 0.12
Identities = 25/108 (23%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
Query: 9 INQVTLLGRVGADPQKRGSEE--HPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
+N++ L+GR+ +P + E + NF +A + + +G+ D+ V+++
Sbjct: 1 MNKILLIGRMTKNPSIKQIETTGNNRCNFTIAVNRRVRNTNGE--NEADFIPVTVWGK-T 57
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQS 114
+ V +Y+KKG + V+G+L + DG + + V+ ++V F ++
Sbjct: 58 AENVARYMKKGYLVGVSGRLQVRTYQDVDGNRKYITEVVGEEVQFLET 105
>UniRef50_Q0FXP6 Cluster: Single-strand DNA binding protein; n=1;
Fulvimarina pelagi HTCC2506|Rep: Single-strand DNA
binding protein - Fulvimarina pelagi HTCC2506
Length = 184
Score = 36.3 bits (80), Expect = 0.16
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 8 AINQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+IN++T+LG +G + + G V +AT+ ++ G +R DW V+I
Sbjct: 80 SINRLTILGHIG-NVKTFGK----VTKVSVATNRNWTDAKGRKQERCDWVPVTILDEAQA 134
Query: 68 DTVYKYLKKGQRIYV---TGKLSYGE 90
V KG RIYV G+ SYGE
Sbjct: 135 RWVADNASKGDRIYVEARVGETSYGE 160
>UniRef50_A0LVD2 Cluster: Single-stranded DNA-binding protein;
n=1; Acidothermus cellulolyticus 11B|Rep:
Single-stranded DNA-binding protein - Acidothermus
cellulolyticus (strain ATCC 43068 / 11B)
Length = 179
Score = 36.3 bits (80), Expect = 0.16
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 11 QVTLLGRVGADPQKRGSEE-HPVINFPLA-THYSYKYESGDILQ-RTDWHRVSIFKPGLR 67
QVT+LG V ADP+ + + H V +F LA T + +G T + V+ ++ GL
Sbjct: 5 QVTILGNVVADPRLNFTADGHAVASFRLAATPRRFDRTAGQWRDGETLFASVTCWR-GLA 63
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVR 99
+ V LK+GQ + V G+L+ DG R
Sbjct: 64 ENVAASLKRGQSVIVIGRLATRWYDAKDGSRR 95
>UniRef50_Q2AZQ3 Cluster: Single-stranded DNA-binding protein;
n=1; Bacillus weihenstephanensis KBAB4|Rep:
Single-stranded DNA-binding protein - Bacillus
weihenstephanensis KBAB4
Length = 123
Score = 35.9 bits (79), Expect = 0.21
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 12 VTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRDTVY 71
+T+ GR+ DP+ E V F +A Y GD + TD+ VS++ + + V
Sbjct: 5 ITITGRLTRDPESNTYGEKTVCRFAVAVDDGY----GD-KKTTDFFNVSVWGK-MGEKVQ 58
Query: 72 KYLKKGQRIYVTGKL 86
+Y KKG + V GK+
Sbjct: 59 RYQKKGSVVQVIGKM 73
>UniRef50_Q7NHP8 Cluster: Single-stranded DNA-binding protein;
n=1; Gloeobacter violaceus|Rep: Single-stranded
DNA-binding protein - Gloeobacter violaceus
Length = 118
Score = 35.5 bits (78), Expect = 0.27
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVI-NFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+NQV L+GR G DP+ R E V+ LA + + G+ + DW + I+
Sbjct: 4 LNQVHLVGRAGRDPEVRYFESGNVLCTVTLAVNRIRR--KGEQEDQPDWSDLEIWGK-TA 60
Query: 68 DTVYKYLKKGQRIYVTGKLSY 88
+ +Y++KG I ++G L++
Sbjct: 61 EIASEYVRKGSLIGISGALAF 81
>UniRef50_Q6F236 Cluster: Single-stranded DNA-binding protein; n=3;
Mollicutes|Rep: Single-stranded DNA-binding protein -
Mesoplasma florum (Acholeplasma florum)
Length = 151
Score = 35.5 bits (78), Expect = 0.27
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 11/109 (10%)
Query: 9 INQVTLLGRVGADPQKRGSE--EHPVINFPLA-THYSYKYESGDILQRTDWHRVSIFKPG 65
+NQV L+GR+ D + R + + ++F LA + YS + E + + ++ +
Sbjct: 1 MNQVCLIGRITKDIELRNTTNGQGKFVSFTLAVSEYSGQKEITNFIPCFAFNNTA----- 55
Query: 66 LRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQS 114
+ + ++L KG I V+G+++ DG+ T T+ AD V F +S
Sbjct: 56 --ENMARFLSKGSLISVSGRVNV-RTSQTDGKYETIVTITADRVNFLES 101
>UniRef50_Q8G757 Cluster: Single-stranded DNA-binding protein; n=7;
Bifidobacterium|Rep: Single-stranded DNA-binding protein
- Bifidobacterium longum
Length = 218
Score = 35.5 bits (78), Expect = 0.27
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 12 VTLLGRVGADPQKRG-SEEHPVINFPLAT------HYSYKYESGDILQRTDWHRVSIFKP 64
+T++G + ADP+ R V +F +A+ + ++E G L + R S ++
Sbjct: 7 ITIVGNLTADPELRTIGSGVTVASFTIASTPRTWNRQTNQFEDGQAL----FMRCSAWRD 62
Query: 65 GLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
L D + LKKG R+ TG+L + DG RT + D++
Sbjct: 63 -LADHCAQSLKKGMRVIATGRLQQRSYQAQDGSQRTVVEMQLDEI 106
>UniRef50_Q38144 Cluster: 36 protein; n=1; Bacillus phage SPP1|Rep:
36 protein - Bacteriophage SPP1
Length = 159
Score = 35.1 bits (77), Expect = 0.36
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 9 INQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N V L+GR+ ADP+ R + V+NF +A + K + + D+ R ++ G+
Sbjct: 1 MNSVNLVGRLAADPELRHTNNGTAVVNFIMAVRRNRKDPTTGQYE-ADFIRCQAWR-GIA 58
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPYES 119
+ + G+ I V+G G + DG+ + + +++ F +S
Sbjct: 59 EVIANNFGTGRMIGVSGSWRTGAFEGQDGKRVYTNDCVVENITFVDPNKSDS 110
>UniRef50_Q184D1 Cluster: Single-stranded DNA-binding protein;
n=3; root|Rep: Single-stranded DNA-binding protein -
Clostridium difficile (strain 630)
Length = 138
Score = 34.7 bits (76), Expect = 0.47
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 9 INQVTLLGRVGADPQKR--GSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
+N +TL+GR+ AD + + + P I F +A YK G ++ D+ +
Sbjct: 1 MNTITLVGRLVADAELKYLPNSGTPKILFRVAVDRKYKDREGK--KKVDFIPCEQLGKHV 58
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDG 96
+ V +YL KG++IY G+L+ K ++G
Sbjct: 59 ENLV-QYLTKGKQIYAFGELNIDNYKDENG 87
>UniRef50_A6T070 Cluster: Single-stranded DNA-binding protein; n=1;
Janthinobacterium sp. Marseille|Rep: Single-stranded
DNA-binding protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 125
Score = 34.7 bits (76), Expect = 0.47
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 9 INQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N++ GRV AD + R + P+ +F LA+ + GD + T+W I+ G R
Sbjct: 1 MNKIAATGRVVADAELRFTAAGDPIASFRLASDVGF----GD-KKTTNWFACQIW--GKR 53
Query: 68 -DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
+ + +L KGQ++ V G+L+ E DG + + D++
Sbjct: 54 GEALAPHLTKGQQVTVFGQLTLREWTNKDGVKAISPDIRVDEI 96
>UniRef50_A0UX93 Cluster: Single-stranded DNA-binding protein; n=1;
Clostridium cellulolyticum H10|Rep: Single-stranded
DNA-binding protein - Clostridium cellulolyticum H10
Length = 142
Score = 34.7 bits (76), Expect = 0.47
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 9 INQVTLLGRVGADPQKR--GSEEHPVINFPLATHYSYKYES---GDILQRTDWHRVSIFK 63
+N+V L+GR+ DP R V +F LA + + E D + W R + F
Sbjct: 1 MNKVLLMGRLTKDPDLRYTSGNNTAVASFTLAVNRRFAREGQPQADFINIVAWDRSAEF- 59
Query: 64 PGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQS 114
KY KG ++ V G++ ++G+ + V+A++ F S
Sbjct: 60 ------CGKYFTKGMQVAVVGRIQTRTWDDNEGKRHYVTEVVAEETYFADS 104
>UniRef50_Q2U7U2 Cluster: Predicted protein; n=6;
Trichocomaceae|Rep: Predicted protein - Aspergillus
oryzae
Length = 183
Score = 34.7 bits (76), Expect = 0.47
Identities = 22/99 (22%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 8 AINQVTLLGRVGADPQKRG-SEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
++ ++ + GR+ A P+ + S VI + +AT + ++T W +V+ F G
Sbjct: 32 SVARMIITGRLAAAPELQATSSGQDVIRYTVATSTGAREN-----RQTSWFKVASFDQGA 86
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVI 105
+ L+KG +Y+ G S + + +G+ +T ++
Sbjct: 87 QRDYVLGLQKGTLVYLEGSASLRDWEDSEGKKQTTLNIV 125
>UniRef50_Q0UG73 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 149
Score = 34.7 bits (76), Expect = 0.47
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 11 QVTLLGRVGADPQK-RGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRDT 69
++T++GR+G P++ + S + ++ + + T+Y K E Q+T W RV+ F G +
Sbjct: 30 KMTVVGRLGTAPEEVQVSGDRTLVRYVVGTNYG-KGEK----QKTSWFRVASFVEGAQKE 84
Query: 70 VYKYLKKGQRIYV 82
+ KG +YV
Sbjct: 85 YLLSVPKGSLLYV 97
>UniRef50_P59932 Cluster: Single-stranded DNA-binding protein; n=3;
Planctomycetaceae|Rep: Single-stranded DNA-binding
protein - Rhodopirellula baltica
Length = 169
Score = 34.7 bits (76), Expect = 0.47
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 6 ITAINQVTLLGRVGADPQKRGSEEH-PVINFPLATHYSYKYESGDILQRTDWHRVSIFKP 64
+ + N+V L+G + D + R V F +A + K G ++ + +++F
Sbjct: 1 MASFNRVMLMGNLTRDIELRYLPSGMAVAEFSIAVNEKRKASDGQWVEDVSFFEITLFGR 60
Query: 65 GLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIAD 107
+ +YL KG I+V G+L + DGQ R+ VI +
Sbjct: 61 -TAEVASEYLSKGSPIFVEGRLKQ-DTWEKDGQKRSKVKVIGE 101
>UniRef50_P32445 Cluster: Single-stranded DNA-binding protein RIM1,
mitochondrial precursor; n=5; Saccharomycetaceae|Rep:
Single-stranded DNA-binding protein RIM1, mitochondrial
precursor - Saccharomyces cerevisiae (Baker's yeast)
Length = 135
Score = 34.7 bits (76), Expect = 0.47
Identities = 22/100 (22%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 10 NQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRDT 69
++++++GR+G++ EH N YS + Q T+W+ +++F +
Sbjct: 20 SKMSIVGRIGSE-----FTEHTSANNNRYLKYSIASQPRRDGQ-TNWYNITVFNEPQINF 73
Query: 70 VYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
+ +Y++KG +YV + + DDG T +++ D+
Sbjct: 74 LTEYVRKGALVYVEADAANYVFERDDGSKGTTLSLVQKDI 113
>UniRef50_UPI00015BC979 Cluster: UPI00015BC979 related cluster; n=1;
unknown|Rep: UPI00015BC979 UniRef100 entry - unknown
Length = 152
Score = 34.3 bits (75), Expect = 0.63
Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 9 INQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
IN+V L+GR+ DP+ R + I+ +A + +Y+ + + + + V + L
Sbjct: 2 INKVILIGRLTKDPELRILPSGNKTIDISIAYNRNYRVNN-EWKEEAHYFDVKAYG-ALA 59
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
D + + KG I V G+L+ DG+ + +++A+ +
Sbjct: 60 DRLSTQISKGYMILVEGRLAQDRWTSQDGKNMSKVSIVAESI 101
>UniRef50_A0L9N4 Cluster: Peptidase, M50 family; n=1;
Magnetococcus sp. MC-1|Rep: Peptidase, M50 family -
Magnetococcus sp. (strain MC-1)
Length = 721
Score = 34.3 bits (75), Expect = 0.63
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 54 TDWHRVSIFKPGLRD--TVYKYLKKGQRIYVTGKLSYG 89
T W+RV+ KP LR VY++L +G+R YV L+ G
Sbjct: 8 TSWYRVAKLKPKLRSQAQVYRHLYRGERWYVIQDLASG 45
>UniRef50_Q9LII1 Cluster: Similarity to unknown protein; n=1;
Arabidopsis thaliana|Rep: Similarity to unknown protein
- Arabidopsis thaliana (Mouse-ear cress)
Length = 217
Score = 34.3 bits (75), Expect = 0.63
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 36 PLATHYSYKYESGDILQRTDWHRVSIFKPGLRDTVYKYLKKGQRIYVTGKL 86
PL +Y S +Q WHRVS++ L D V K ++ G IY+ G L
Sbjct: 120 PLINEDPREYASRSAVQ---WHRVSVYPERLADLVLKNVEPGTVIYLEGNL 167
>UniRef50_Q55499 Cluster: Single-stranded DNA-binding protein;
n=38; Cyanobacteria|Rep: Single-stranded DNA-binding
protein - Synechocystis sp. (strain PCC 6803)
Length = 121
Score = 34.3 bits (75), Expect = 0.63
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 8 AINQVTLLGRVGADPQKRGSEEHPVI-NFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
++N + L+GR G DP+ + E V+ NF LA + + + DW + I+
Sbjct: 2 SVNSIHLVGRAGRDPEVKYFESGNVVCNFTLAVNRRTSKKD----EPPDWFDLEIWGK-T 56
Query: 67 RDTVYKYLKKGQRIYVTGKLSY 88
+ Y+KKG I + G L +
Sbjct: 57 AEIAGNYVKKGSLIGIQGSLKF 78
>UniRef50_O51141 Cluster: Single-stranded DNA-binding protein; n=5;
Borrelia|Rep: Single-stranded DNA-binding protein -
Borrelia burgdorferi (Lyme disease spirochete)
Length = 149
Score = 34.3 bits (75), Expect = 0.63
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 9 INQVTLLGRVGADPQKRGSEEH-PVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
IN + L GR+ D + +E V+ F +A + K ++ + + + IF
Sbjct: 4 INSLVLSGRLTRDSELSYTESGMAVLRFSIANNRRMK-KNDEWIDYPQYFDCVIFSKRA- 61
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVK-LDDGQVRTASTVIADDVIFFQS 114
+++ YLKKG+++ V+G L Y + + G R+ + D++ F S
Sbjct: 62 ESLNDYLKKGKQVVVSGSLKYESWQDRNTGDKRSKVNIFVDNLQMFSS 109
>UniRef50_UPI0000DB7E73 Cluster: PREDICTED: hypothetical protein;
n=1; Apis mellifera|Rep: PREDICTED: hypothetical
protein - Apis mellifera
Length = 131
Score = 33.9 bits (74), Expect = 0.83
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 9 INQVTLLGRVGADPQ-KRGSEEHPVINFPLATHYSYKYE-SGDILQRTDWHRVSIFKPGL 66
IN+V L+G + DP+ K + L + S++ + + + ++ +V +F L
Sbjct: 5 INKVVLIGILAKDPEIKMIQSGDNIATLVLMVNDSWENRRTAQQINKVEYFKVVVFSKNL 64
Query: 67 RDTVYKYLKKGQRIYVTGKL 86
+ +KKG ++Y+ G+L
Sbjct: 65 IKQIETVIKKGDQLYIEGQL 84
>UniRef50_Q1QFG2 Cluster: Single-strand binding protein/Primosomal
replication protein n precursor; n=1; Nitrobacter
hamburgensis X14|Rep: Single-strand binding
protein/Primosomal replication protein n precursor -
Nitrobacter hamburgensis (strain X14 / DSM 10229)
Length = 112
Score = 33.9 bits (74), Expect = 0.83
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Query: 10 NQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRDT 69
N L GRVG P + + IN +AT ++ G+ + TDW V+I +
Sbjct: 5 NLFILRGRVGQAP--KAFNKAAKIN--VATDRAWTDGKGERREETDWVTVTILNEKAAEW 60
Query: 70 VYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTV 104
+ KG +Y +++ G K D V T +
Sbjct: 61 AIANVAKGDAVYAECRIADGSYKKDGETVYTTDVI 95
>UniRef50_A4J7S4 Cluster: Single-stranded DNA-binding protein; n=1;
Desulfotomaculum reducens MI-1|Rep: Single-stranded
DNA-binding protein - Desulfotomaculum reducens MI-1
Length = 224
Score = 33.9 bits (74), Expect = 0.83
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 9 INQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N V ++GR+ DP+ R ++ V N +A + D T + + +
Sbjct: 1 MNSVNIIGRLTRDPELRYTQNGKAVTNMSIAVQRYGNKDEADFFDCTAFEKTA------- 53
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDD---GQVRTASTVIADDVIF 111
+T+ L KG+ + V+G+L + + DD GQ R+A ++ + + F
Sbjct: 54 ETIANNLTKGREVGVSGRLQ--QERWDDQQTGQKRSAVKIMVNSITF 98
>UniRef50_Q9RY51 Cluster: Single-stranded DNA-binding protein; n=8;
Deinococcus|Rep: Single-stranded DNA-binding protein -
Deinococcus radiodurans
Length = 301
Score = 33.9 bits (74), Expect = 0.83
Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 8 AINQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
A+N+V +LG V DP+ R + V++ +A + +Y+ G ++ + ++++ L
Sbjct: 128 AMNEVLVLGNVTRDPEIRYTPAGDAVLSLSIAVNENYQDRQGQRQEKVHYIDATLWR-DL 186
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
+ + K L+KG + + G+L DG R ++ V A V
Sbjct: 187 AENM-KELRKGDPVMIMGRLVNEGWTDKDGNKRNSTRVEATRV 228
Score = 31.9 bits (69), Expect = 3.3
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 3/100 (3%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRT-DW-HRVSIFKPGL 66
+N V L+G + DP+ R + + F + D +R W HRVSI
Sbjct: 5 MNHVYLIGALARDPELRYTGNGMAV-FEATVAGEDRVIGNDGRERNLPWYHRVSILGKPA 63
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIA 106
+ LK G + V G L Y + + +G R+A V A
Sbjct: 64 EWQAERNLKGGDAVVVEGTLEYRQWEAPEGGKRSAVNVKA 103
>UniRef50_A7LTU8 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 360
Score = 33.5 bits (73), Expect = 1.1
Identities = 18/55 (32%), Positives = 25/55 (45%)
Query: 31 PVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRDTVYKYLKKGQRIYVTGK 85
P I+F TH + S D++Q + L+DT Y Y KG + Y GK
Sbjct: 169 PYIDFLCVTHKHSDHYSNDLIQAMFDLGKPVLSNYLKDTTYPYTAKGDKDYEIGK 223
>UniRef50_Q9PPT7 Cluster: Single-stranded DNA-binding protein; n=1;
Ureaplasma parvum|Rep: Single-stranded DNA-binding
protein - Ureaplasma parvum (Ureaplasma urealyticum
biotype 1)
Length = 166
Score = 33.5 bits (73), Expect = 1.1
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVI-NFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N+V L+G + DP+ R ++ NF +A + + + + ++ W+ + F
Sbjct: 1 MNKVILIGNLVRDPEARQIPSGRLVTNFTIAVNDNTPNANANFIRCVAWNNQANF----- 55
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
+ YLKKG I + G++ ++G+ + V AD V
Sbjct: 56 --LTTYLKKGDAIAIEGRIVSRSYVDNNGKTNYVTEVYADQV 95
>UniRef50_Q8GJE0 Cluster: Single-stranded DNA-binding protein; n=2;
Campylobacter jejuni|Rep: Single-stranded DNA-binding
protein - Campylobacter jejuni
Length = 152
Score = 33.1 bits (72), Expect = 1.4
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 2/113 (1%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVI-NFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+NQV L G +G D + + + L + + E G+ T W + +F
Sbjct: 1 MNQVNLCGYLGKDFELKYTPNGSAFAKTTLGVSENRRNEKGEYEAYTSWIPIILFGRKA- 59
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPYESE 120
+ +Y+KKG R TGK+ G +R V+ F + +++
Sbjct: 60 EVANQYIKKGDRFLGTGKIVTSSYTDQYGNIRYGWQVVISSFEFIEKKAEQNQ 112
>UniRef50_A7B3C8 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 131
Score = 33.1 bits (72), Expect = 1.4
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 10/108 (9%)
Query: 9 INQVTLLGRVGADPQKR-GSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
+N V+L GR+ +P+ R G ++ N T ++ + G + TD+ + F
Sbjct: 1 MNNVSLTGRLTREPELRYGGQD----NSTAITRFTLAVDDG---KDTDFINIKCFGR-TA 52
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLD-DGQVRTASTVIADDVIFFQS 114
+ K+L KG R VTGK+ G + G + V+A+ V F +S
Sbjct: 53 EWAQKWLSKGSRAEVTGKIKTGSYESQRTGSKVYYTEVVANSVGFGES 100
>UniRef50_A4M9L5 Cluster: Single-stranded DNA-binding protein; n=1;
Petrotoga mobilis SJ95|Rep: Single-stranded DNA-binding
protein - Petrotoga mobilis SJ95
Length = 171
Score = 33.1 bits (72), Expect = 1.4
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Query: 10 NQVTLLGRVGADPQKRGSEE-HPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRD 68
N+V L+GR+ DP+ R + + V NF LA + + TD+ ++ F D
Sbjct: 6 NKVILVGRLTRDPEIRSTMNGNNVANFHLAVDGG----TSNNQDGTDFIKIVAFGKQA-D 60
Query: 69 TVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQS 114
YLKKG+ I V G L + D R + + A+ + F ++
Sbjct: 61 FASNYLKKGKLILVEGSLHINQWTDRDNIKRETAEIWANRMNFMET 106
>UniRef50_A4JV78 Cluster: Single-stranded DNA-binding protein;
n=1; Burkholderia vietnamiensis G4|Rep: Single-stranded
DNA-binding protein - Burkholderia vietnamiensis
(strain G4 / LMG 22486) (Burkholderiacepacia (strain
R1808))
Length = 136
Score = 33.1 bits (72), Expect = 1.4
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 15 LGRVGADPQKRGSEEHPVINFPLATHYSYKYE-SGDILQRTDWHRVSIFKPGLRDTVYKY 73
+G + ADP R + + V+NF + T+ +K + + + R + ++ G +
Sbjct: 12 IGYLAADPSFRKNGDQKVVNFRVLTNEVWKDKATQEERSRVEGFNYELWGEGAEHFAER- 70
Query: 74 LKKGQRIYVTGK 85
+KKG+R+YV G+
Sbjct: 71 MKKGRRVYVVGQ 82
>UniRef50_Q5VP75 Cluster: Single-strand DNA binding protein-like;
n=4; Magnoliophyta|Rep: Single-strand DNA binding
protein-like - Oryza sativa subsp. japonica (Rice)
Length = 224
Score = 33.1 bits (72), Expect = 1.4
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 9 INQVTLLGRVGADP-QKRGSEEHPVINFPLAT-------HYSYKYESGDILQR--TDWHR 58
I + ++G+VG +P QKR V+ F L T + E +R WHR
Sbjct: 89 IYKAIMVGKVGQEPIQKRLRSGRTVVLFSLGTGGIRNNRRPLDREEPHQYAERCSVQWHR 148
Query: 59 VSIFKPGLRDTVYKYLKKGQRIYVTGKL 86
V I+ L K++K G +Y+ G L
Sbjct: 149 VCIYPERLGSLALKHVKTGSVLYLEGNL 176
>UniRef50_Q4E023 Cluster: Mitochondrial DNA polymerase beta-PAK,
putative; n=3; Trypanosoma cruzi|Rep: Mitochondrial DNA
polymerase beta-PAK, putative - Trypanosoma cruzi
Length = 629
Score = 33.1 bits (72), Expect = 1.4
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 28 EEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRDTVYKYLKKGQRIYVTG 84
+E PV++ A KY DI+QR + V + + L+ + KYL KG + + G
Sbjct: 272 DEDPVLHLTEAQRLGLKYHR-DIMQRIPYEEVRLHEAFLKLRLRKYLGKGYELSICG 327
>UniRef50_Q4DK95 Cluster: RNA-editing complex protein, putative;
n=4; Trypanosoma|Rep: RNA-editing complex protein,
putative - Trypanosoma cruzi
Length = 395
Score = 33.1 bits (72), Expect = 1.4
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRD 68
+N +LG V + Q+ E V+ F L T + GD D+H V IF +
Sbjct: 291 VNYCVVLGPV-QNIQEGYVFEEKVVQFTLITDFEGP-SPGD--PDKDFHTVRIFDNSFCE 346
Query: 69 TVYKYLKKGQRIYVTGKL 86
+ K LK+G R VTG+L
Sbjct: 347 QMKKELKEGDRFLVTGRL 364
>UniRef50_Q927X0 Cluster: Single-stranded DNA-binding protein;
n=13; Listeria|Rep: Single-stranded DNA-binding protein
- Listeria innocua
Length = 121
Score = 32.7 bits (71), Expect = 1.9
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 9 INQVTLLGRVGADPQ-KRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR 67
INQVTL+GR+ +P+ K +E+ V+N +A + K + D D+ + I+
Sbjct: 2 INQVTLVGRLTKEPELKWTTEDRAVLNLTIALNRFRKNKRVD--NDADFIQCVIWGKRAE 59
Query: 68 DTVYKYLKKGQRIYVTGKL 86
T ++ KGQ + V G+L
Sbjct: 60 ATA-EFCSKGQLVGVIGEL 77
>UniRef50_A1WDI7 Cluster: Single-stranded DNA-binding protein;
n=1; Acidovorax sp. JS42|Rep: Single-stranded
DNA-binding protein - Acidovorax sp. (strain JS42)
Length = 143
Score = 32.7 bits (71), Expect = 1.9
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 6 ITAINQVTLLGRVGADPQKRGSEEH-PVINFPLATHYSYKYESGDILQRTDWHRVSIFKP 64
+ +IN T++G V D + R + P + F +A Y G + TD+ V+ +
Sbjct: 1 MASINTFTIVGNVTKDVELRYTPSGTPSVTFTVAVDNVYFDRDGKKHEETDFIPVTTYGK 60
Query: 65 GLRDTVYKYLKKGQRIYVTGKL 86
+ K+LKKG + V G++
Sbjct: 61 QAENDA-KFLKKGSTVAVMGRI 81
>UniRef50_Q8KAM2 Cluster: Single-stranded DNA-binding protein 2;
n=9; Chlorobiaceae|Rep: Single-stranded DNA-binding
protein 2 - Chlorobium tepidum
Length = 148
Score = 32.7 bits (71), Expect = 1.9
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 3/114 (2%)
Query: 9 INQVTLLGRVGADP--QKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGL 66
IN V + G + DP ++ S PV+NF +A + ++ +S Q + + L
Sbjct: 4 INSVIIAGNLTKDPVFRQTNSGGTPVVNFSIACNRRFR-DSNHQWQEDVCYVGVVAWNKL 62
Query: 67 RDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPYESE 120
++ L+K + V G+L K DG RT + A + F E
Sbjct: 63 AESCRDNLRKSSAVLVDGELQSRTWKAQDGTSRTVVEIKARRIQFLNKRKKNGE 116
>UniRef50_Q4HGL1 Cluster: Single-stranded DNA-binding protein; n=2;
Campylobacter|Rep: Single-stranded DNA-binding protein -
Campylobacter coli RM2228
Length = 182
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/109 (20%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 10 NQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRDT 69
N+V L+G + D + R + I +G+ + T + +S F +
Sbjct: 3 NKVVLVGNLTRDIEMRYGQNGNAIGASAIAVTRRFTTNGERREETCFIDIS-FYGRTAEV 61
Query: 70 VYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPYE 118
+YL KG ++ + G+L + + +GQ+R+ +V +++ + P +
Sbjct: 62 ANQYLSKGSKVLIEGRLRFEQWNDQNGQMRSKHSVQVENMEMLGNNPQQ 110
>UniRef50_Q8FLP9 Cluster: Single-stranded DNA-binding protein; n=51;
root|Rep: Single-stranded DNA-binding protein -
Corynebacterium efficiens
Length = 232
Score = 32.3 bits (70), Expect = 2.5
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 12/105 (11%)
Query: 12 VTLLGRVGADPQKRGSEEHPVI-NFPLAT------HYSYKYESGDILQRTDWHRVSIFKP 64
+T++G + ADP+ R + + NF +A+ + ++E G+ L T ++++
Sbjct: 8 ITVVGNLVADPELRFTPSGAAVANFRIASTPRTFNRTTNQWEDGEGLFLT----CNVWRE 63
Query: 65 GLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
+ V + L KG R+ V G+L + +G+ RT V DDV
Sbjct: 64 AA-ENVAESLTKGMRVIVQGRLRQRSYETREGEKRTIFEVEVDDV 107
>UniRef50_Q2L0B3 Cluster: Putative membrane protein; n=1;
Bordetella avium 197N|Rep: Putative membrane protein -
Bordetella avium (strain 197N)
Length = 717
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 51 LQRTDWHRVSIFKPGLRD--TVYKYLKKGQRIYVTGKLSYGE 90
L WHRVS +P LR +++++ +GQ YV S GE
Sbjct: 6 LYSNSWHRVSTLRPRLRSHIHIHRHVYRGQTWYVMQDQSNGE 47
>UniRef50_Q3F0X3 Cluster: Single-stranded DNA-binding protein;
n=1; Bacillus thuringiensis serovar israelensis ATCC
35646|Rep: Single-stranded DNA-binding protein -
Bacillus thuringiensis serovar israelensis ATCC 35646
Length = 178
Score = 31.9 bits (69), Expect = 3.3
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 14 LLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRDTVYKY 73
++GR+ DP+ E+ V F +A Y GD + TD+ VS + L V +Y
Sbjct: 7 IVGRLTRDPESTPYGENTVCRFAVAVDDGY----GD-KKTTDFFNVSAWGK-LGANVQQY 60
Query: 74 LKKGQRIYVTGKL 86
KKG + V GK+
Sbjct: 61 TKKGSVVLVEGKM 73
>UniRef50_A6DQM0 Cluster: Single-stranded DNA-binding protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: Single-stranded
DNA-binding protein - Lentisphaera araneosa HTCC2155
Length = 201
Score = 31.9 bits (69), Expect = 3.3
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 15 LGRVGADPQKRG-SEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLR-DTVYK 72
+G + DP+ R + V +A Y+ SG+ R D V + G + +T
Sbjct: 1 MGNLTRDPELRQLASGQAVCTLRMAVSRPYRTASGE--SREDTLYVDVVAWGRQAETSNT 58
Query: 73 YLKKGQRIYVTGKLSYGEVK-LDDGQVRTASTVIADDVIFFQSTP 116
YL+KG I+V G L + + GQ R +V A+ V F +TP
Sbjct: 59 YLRKGSSIFVEGSLRLEQWQDKTTGQSRQRHSVTAERVQFL-NTP 102
>UniRef50_A4E7B3 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 102
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 68 DTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
+ V ++L KG ++ + GKL Y + DGQ R+ VI D++
Sbjct: 7 EAVGRFLAKGMKVAIEGKLRYSSWE-RDGQKRSKLEVIVDEI 47
>UniRef50_O74715 Cluster: Telomere-binding protein; n=1; Candida
parapsilosis|Rep: Telomere-binding protein - Candida
parapsilosis (Yeast)
Length = 133
Score = 31.9 bits (69), Expect = 3.3
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 14 LLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRDTVYKY 73
L GRVG K + + + LA + K+ G+ TDW+ ++IF G K
Sbjct: 23 LFGRVGNVDFKESANGTKYVRYSLAVN---KFRKGED-SITDWYNITIFDEGELQKAEKA 78
Query: 74 LKKGQRIYVTGKLSYGEVKLDDGQVRTAST 103
L+ G ++ V L K +D + + T
Sbjct: 79 LRVGNKMIVDVTLRLD--KFEDPETKKVQT 106
>UniRef50_Q823K0 Cluster: Single-stranded DNA-binding protein; n=9;
Chlamydiaceae|Rep: Single-stranded DNA-binding protein -
Chlamydophila caviae
Length = 161
Score = 31.9 bits (69), Expect = 3.3
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Query: 15 LGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRDTVYKYL 74
+G +GADP++R + + + + K G T W + +++ D + YL
Sbjct: 7 VGYLGADPEERMTSKGKRV---VVLRLGVKSRIGT-KDETVWCKCNVWH-NRYDKMLPYL 61
Query: 75 KKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIF 111
KKG + V G +S DG +++ + D + F
Sbjct: 62 KKGSGVIVAGDISVESYMSKDGTPQSSLVISVDTIKF 98
>UniRef50_Q8ABB6 Cluster: Putative uncharacterized protein; n=1;
Bacteroides thetaiotaomicron|Rep: Putative
uncharacterized protein - Bacteroides thetaiotaomicron
Length = 352
Score = 31.5 bits (68), Expect = 4.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 31 PVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRDTVYKYLKKGQRIYVTGK 85
P I+F TH + + D++Q + L+DT Y Y KG + Y GK
Sbjct: 161 PYIDFLCVTHKHSDHYNTDLIQAMFDLDKPVLSNYLKDTTYPYTAKGDKDYEIGK 215
>UniRef50_A6S3I4 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 135
Score = 31.5 bits (68), Expect = 4.4
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 11 QVTLLGRVGADPQKRG-SEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKP-GLRD 68
++TL+GR+ P+ S+ ++ + + T + E+ Q+T W RV F P G +
Sbjct: 27 KLTLIGRLADKPEITATSQGQEIMKYAVGTSTG-RGEN----QKTSWFRVVSFLPEGPQR 81
Query: 69 TVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIAD--DVIFFQ 113
L KG +YV + + DG+ R++ + + DV+ F+
Sbjct: 82 DFISSLDKGTLVYVEAEAQMNNYQDADGKNRSSMSAVQQRIDVLQFK 128
>UniRef50_UPI000038E168 Cluster: hypothetical protein Faci_03001062;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001062 - Ferroplasma acidarmanus fer1
Length = 338
Score = 31.1 bits (67), Expect = 5.8
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 33 INFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRDTVYKYLKKGQRIYVTGKLSYGEVK 92
I F + YK+ IL++ D+ SI GLR+ + +TGK+
Sbjct: 18 IGFTILLFIIYKFVPITILKK-DYPGTSINVLGLRENDFFQYFYFLYALITGKMGNVNTL 76
Query: 93 LDDGQVRTASTVIADDVIFF 112
L G V++A ++I + IFF
Sbjct: 77 LYSGTVKSAVSIILPETIFF 96
>UniRef50_Q899V7 Cluster: Putative uncharacterized protein; n=1;
Clostridium tetani|Rep: Putative uncharacterized protein
- Clostridium tetani
Length = 248
Score = 31.1 bits (67), Expect = 5.8
Identities = 16/60 (26%), Positives = 31/60 (51%)
Query: 45 YESGDILQRTDWHRVSIFKPGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTV 104
Y++ + ++ ++ KPG ++ Y+Y G R + KLSY E+ G +A+T+
Sbjct: 105 YDTDETFDISNSKFMAYAKPGSKENPYRYCTPGARRTESSKLSYAEILGMVGAGASAATI 164
>UniRef50_Q4A5N0 Cluster: Single-stranded DNA-binding protein; n=1;
Mycoplasma synoviae 53|Rep: Single-stranded DNA-binding
protein - Mycoplasma synoviae (strain 53)
Length = 188
Score = 31.1 bits (67), Expect = 5.8
Identities = 24/109 (22%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 9 INQVTLLGRVGADPQKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRD 68
+N+V L+GRV D + ++ + I++ T +Y + + + +D+ ++ +
Sbjct: 4 LNKVILVGRVTNDFLLQKTKNN--ISYARNTIAVTRYTTSNTQRVSDFLPFVAWR-NQAE 60
Query: 69 TVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIFFQSTPY 117
+ KY+KKG I + GK+ ++G + + ++ D+V S Y
Sbjct: 61 FLCKYVKKGDTILLEGKIQSNSYNNNEGTLVRSIDILVDNVQILASKNY 109
>UniRef50_A6PMD2 Cluster: Single-stranded DNA-binding protein; n=1;
Victivallis vadensis ATCC BAA-548|Rep: Single-stranded
DNA-binding protein - Victivallis vadensis ATCC BAA-548
Length = 218
Score = 31.1 bits (67), Expect = 5.8
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 7 TAINQVTLLGRVGADPQKRGSEEHP-VINFPLATHYSYKYESGDILQRTDWHRVSIFKPG 65
+++N+V LLG + DP R V F LA + + +G + T + + ++
Sbjct: 3 SSLNKVFLLGNLTRDPDLRYLPNGSGVCEFGLAVNRRF-VSNGKEIDETCFVDIVVWGKA 61
Query: 66 LRDTVYKYLKKGQRIYVTGKLSYGEVK-LDDGQVRTASTVIADDVIF 111
+ ++L+KG + + G+L + + + + G R+ V+AD V F
Sbjct: 62 A-ENCKQFLEKGSQALIEGRLQFDQWEDRNGGGKRSRLRVVADQVQF 107
>UniRef50_A6PBJ0 Cluster: Putative uncharacterized protein; n=1;
Shewanella sediminis HAW-EB3|Rep: Putative
uncharacterized protein - Shewanella sediminis HAW-EB3
Length = 593
Score = 31.1 bits (67), Expect = 5.8
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 39 THYSYKYESGDILQRTDWHRVSIF--KPGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDG 96
TH Y +E G IL+ TD +VS+F K L DT + Y +K + + +V D G
Sbjct: 163 THGHYWFECGKILELTDMGKVSMFMMKNKLMDTSF-YTEKESEFAINTLSEFFKVIHDKG 221
Query: 97 QV 98
+
Sbjct: 222 TI 223
>UniRef50_O25841 Cluster: Single-stranded DNA-binding protein; n=6;
Epsilonproteobacteria|Rep: Single-stranded DNA-binding
protein - Helicobacter pylori (Campylobacter pylori)
Length = 179
Score = 31.1 bits (67), Expect = 5.8
Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 10 NQVTLLGRVGADPQ-KRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVSIFKPGLRD 68
N+V ++GR+ + + K LAT +K + G + + + +F +
Sbjct: 3 NKVIMVGRLTRNVELKYLPSGSAAATIGLATSRRFKKQDGTLGEEVCFIDARLFGR-TAE 61
Query: 69 TVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDVIF 111
+YL KG + + G+L+Y G+ + T+ AD + F
Sbjct: 62 IANQYLSKGSSVLIEGRLTYESWMDQTGKKNSRHTITADSLQF 104
>UniRef50_Q8GAN5 Cluster: Single-stranded DNA-binding protein; n=5;
Actinomycetales|Rep: Single-stranded DNA-binding protein
- Arthrobacter nicotinovorans
Length = 170
Score = 31.1 bits (67), Expect = 5.8
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 12 VTLLGRVGADPQKRGSEE-HPVINFPLA-THYSYKYESGDILQ-RTDWHRVSIFKPGLRD 68
+T++G + DP+ R + V NF +A T ++ ++ + T + R S+++ + +
Sbjct: 7 ITVIGNLTNDPELRFTPSGSAVANFTIASTPRTFDRQASEWKDGETLFLRASVWRE-MAE 65
Query: 69 TVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
V L KG R+ +G+L + +G RT + D++
Sbjct: 66 NVAGSLTKGTRVIASGRLKSRSYETKEGDNRTVVELEVDEI 106
>UniRef50_Q5NXI5 Cluster: Putative uncharacterized protein; n=1;
Azoarcus sp. EbN1|Rep: Putative uncharacterized protein
- Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
(strain EbN1))
Length = 197
Score = 30.7 bits (66), Expect = 7.7
Identities = 15/23 (65%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Query: 90 EVKLDDGQVRTASTVIADDVIFF 112
EV+LDDG V A VI DDV+FF
Sbjct: 140 EVQLDDGVVH-AGVVIGDDVVFF 161
>UniRef50_Q4L318 Cluster: Similar to 2-keto-3-deoxygluconate kinase;
n=1; Staphylococcus haemolyticus JCSC1435|Rep: Similar
to 2-keto-3-deoxygluconate kinase - Staphylococcus
haemolyticus (strain JCSC1435)
Length = 336
Score = 30.7 bits (66), Expect = 7.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 44 KYESGDILQRTDWHRVSIFKPGLRDTVYKYLKKGQRIYVT 83
+YE IL+ +W ++ L D +++YLKK +I T
Sbjct: 117 EYEIESILKAHEWFHITGITAALNDALFEYLKKAVKIAKT 156
>UniRef50_A4A539 Cluster: WalW protein; n=1; Congregibacter
litoralis KT71|Rep: WalW protein - Congregibacter
litoralis KT71
Length = 314
Score = 30.7 bits (66), Expect = 7.7
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 26 GSEEHPVINFPLATHYSY-KYESGDILQRTDWHRVSIFKPGLRDTVYKYLKKGQRIYVTG 84
G+ HP +N PL S G++ + T++ ++ + LRD + K K R Y G
Sbjct: 75 GAHLHPWVNPPLTETLSVANMYPGNLDRETEFKKIQV----LRDEITKVFGKAPRAYKAG 130
Query: 85 KLSYG 89
+ +G
Sbjct: 131 RYGFG 135
>UniRef50_A7PRW7 Cluster: Chromosome chr14 scaffold_27, whole genome
shotgun sequence; n=7; Magnoliophyta|Rep: Chromosome
chr14 scaffold_27, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 203
Score = 30.7 bits (66), Expect = 7.7
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 9 INQVTLLGRVGADP-QKRGSEEHPVINFPLATHYSYKYESG--DILQRTDWHRVSIFKPG 65
+++ + G+VG P QK V F + T + G D+ + WHR+++
Sbjct: 78 VHKAIICGKVGQAPVQKILRNGRTVTIFTVGTGGMFDQRIGGKDLPKPAQWHRIAVHNEP 137
Query: 66 LRDTVYKYLKKGQRIYVTGKL 86
L + L K +YV G +
Sbjct: 138 LGAYAVQQLVKNSSVYVEGDI 158
>UniRef50_Q9HSH8 Cluster: Putative uncharacterized protein; n=1;
Halobacterium salinarum|Rep: Putative uncharacterized
protein - Halobacterium salinarium (Halobacterium
halobium)
Length = 420
Score = 30.7 bits (66), Expect = 7.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 23 QKRGSEEHPVINFPLATHYSYKYESGDILQRTDWHRVS 60
Q+ G P +A H + +Y SGD L R DW R++
Sbjct: 178 QRAGPTPTPTGGSGVAFHATREYRSGDPLSRVDWTRLA 215
>UniRef50_A0B671 Cluster: Indolepyruvate ferredoxin oxidoreductase;
n=1; Methanosaeta thermophila PT|Rep: Indolepyruvate
ferredoxin oxidoreductase - Methanosaeta thermophila
(strain DSM 6194 / PT) (Methanothrixthermophila (strain
DSM 6194 / PT))
Length = 483
Score = 30.7 bits (66), Expect = 7.7
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 37 LATHYSYKYESGDILQRTDWHRVSIFKPGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDG 96
LA YSY I + + HR+ + G + +LK R +TG L YG VK +D
Sbjct: 241 LAPLYSYPLPWKTIERFLEMHRLVLVAEGPGTFIESHLKD-VRGRLTGHLPYGRVKAND- 298
Query: 97 QVRTASTVI 105
+RTA ++I
Sbjct: 299 -LRTALSLI 306
>UniRef50_Q83N34 Cluster: Single-stranded DNA-binding protein 1;
n=2; Tropheryma whipplei|Rep: Single-stranded
DNA-binding protein 1 - Tropheryma whipplei (strain
Twist) (Whipple's bacillus)
Length = 186
Score = 30.7 bits (66), Expect = 7.7
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Query: 12 VTLLGRVGADPQKRGSEEHP-VINFPLA-THYSYKYESGDILQRTDWHRVSIFKPGLRDT 69
VT++G + ADP+ R + V+N +A T Y +SG+ I
Sbjct: 5 VTVVGNLTADPELRYTATGAAVVNMTIASTPRMYDRQSGEWKDGEPLFLRGILWREYAIN 64
Query: 70 VYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTASTVIADDV 109
L KG R+ GKL + +G RT+ + D++
Sbjct: 65 AAASLAKGMRVVAVGKLKQRNYETREGDRRTSVELEIDEI 104
>UniRef50_P56211 Cluster: cAMP-regulated phosphoprotein 19; n=40;
Tetrapoda|Rep: cAMP-regulated phosphoprotein 19 - Homo
sapiens (Human)
Length = 112
Score = 30.7 bits (66), Expect = 7.7
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 63 KPGLRDTVYKYLKKGQRIYVTGKLSYGEVKLDDGQVRTAS 102
KPG D + K L+KGQ+ + +G + + K+ + Q+ TA+
Sbjct: 42 KPGGSDFLRKRLQKGQKYFDSGDYNMAKAKMKNKQLPTAA 81
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.319 0.137 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,240,868
Number of Sequences: 1657284
Number of extensions: 5230434
Number of successful extensions: 10628
Number of sequences better than 10.0: 205
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 134
Number of HSP's that attempted gapping in prelim test: 10409
Number of HSP's gapped (non-prelim): 209
length of query: 121
length of database: 575,637,011
effective HSP length: 90
effective length of query: 31
effective length of database: 426,481,451
effective search space: 13220924981
effective search space used: 13220924981
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 66 (30.7 bits)
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