Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000976-TA|BGIBMGA000976-PA|undefined
(1465 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1B1.04c |||poly|Schizosaccharomyces pombe|chr 1|||Manual 34 0.17
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 34 0.17
SPCC576.15c |ksg1||serine/threonine protein kinase Ksg1|Schizosa... 33 0.30
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 2.1
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 30 2.8
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 3.6
SPAC821.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 4.8
SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces pomb... 29 4.8
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 29 6.4
SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation fac... 29 6.4
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 28 8.4
SPBP8B7.17c |||phosphomethylpyrimidine kinase|Schizosaccharomyce... 28 8.4
>SPAC1B1.04c |||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 604
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 700 PNVNELSNAVMADYLANRIPPPAHSSTTNQQQNGSYF 736
PN +LSNA M+ ++ R PP H+ QQ+ S+F
Sbjct: 127 PNSGQLSNADMSRHILARFPPFFHNLNEQQQKTTSFF 163
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 934 NDLTKSPCDSSVTQHSANGAMPSSNVINTGMSLGNQVMSSSASMSTTGLLGANQVHSGSS 993
N T + S+ ++ + +P+S+V +T +S N ++SAS + + + S SS
Sbjct: 395 NSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLSSVNSTTATSASS 454
Query: 994 NLLNS 998
L+S
Sbjct: 455 TPLSS 459
Score = 31.9 bits (69), Expect = 0.68
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 937 TKSPCDSSVTQHSANGAMPSSNVINTGMSLGNQVMSSSASMSTTGLLGANQVHSGSSNLL 996
T + SS Q++ + +PSS +T +S N ++SAS + + + S SS L
Sbjct: 265 TSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPL 324
Query: 997 NS 998
+S
Sbjct: 325 SS 326
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 934 NDLTKSPCDSSVTQHSANGAMPSSNVINTGMSLGNQVMSSSASMSTTGLLGANQVHSGSS 993
N T + S+ ++ + +P+S+V +T +S N ++SAS + + + S SS
Sbjct: 509 NSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLTSVNSTTATSASS 568
>SPCC576.15c |ksg1||serine/threonine protein kinase
Ksg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 592
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/38 (39%), Positives = 18/38 (47%)
Query: 732 NGSYFDFERWNLPPPPPKMFPGASAFGSHATNFANQHQ 769
NG FD W LPPP K F S N +N+H+
Sbjct: 367 NGIKFDNTLWELPPPRLKPFGHTSVLSLSVPNASNKHE 404
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 30.3 bits (65), Expect = 2.1
Identities = 45/279 (16%), Positives = 93/279 (33%), Gaps = 15/279 (5%)
Query: 6 PWSAYASYNRLAGVQAGAASGDFHHHLAXXXXXXXXXXVPSTTSQLLLQAAHTTASLAGQ 65
P S +SY + V + ++S +PST+S ++ T++SL+
Sbjct: 202 PTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSS----SSSSTSSSLSSS 257
Query: 66 LGSSTASPFNPGGFLSPPSVGYDAMFSPLFHHANPKPAHYSSSLXXXXXXXXXXXXXXXX 125
SSTAS + + S + SP + + SSS
Sbjct: 258 SSSSTASSSSSSSSIISSSSSSSS--SPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSS 315
Query: 126 XXXXXXXXXXXXXRENYSHQTLAAQGASFFDQSSTPGSTTGLSWQGNNQLPSPFGILPHE 185
++S + + ++ SS+P S++ S +++ S F
Sbjct: 316 SFSSTLSSSSMSSSSSFS-SSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSF------ 368
Query: 186 XXXXXXXXXXXXXXXXXYENFNAHFAAAQTINNHLNSQISSTGKQANRSGSPATATKXXX 245
+ ++ A++ + ++ L+S SS+ ++ S +P ++
Sbjct: 369 SSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKS--SSAPVSSAFYHN 426
Query: 246 XXXXXXXXXXXXXXXGNQTDNSYSTSSAKSGQLSSQQDY 284
+ + T+S+ S SS Y
Sbjct: 427 STSSRSSSHSSSHSLSSLSSKPILTASSSSLLTSSSHTY 465
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 936 LTKSPCDSSVTQHSANGAMPSSNVINTGMSLGNQVMSSSASMSTTGLLGANQVHSGSSNL 995
+T S S+ T+ + + ++ +S+ I S N SSS S+TG L +N + S +S++
Sbjct: 486 VTSSSIFSTATE-ATDTSVQTSSAIYDSSSTSNIQSSSSVYASSTGALSSNSLSSSTSSV 544
Query: 996 LNS 998
S
Sbjct: 545 STS 547
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/63 (28%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 937 TKSPCDSSVTQHSANGAMPSSNVINTGMSL-GNQVMSSSASMSTTGLLGANQVHSGSSNL 995
T +P SS +S+ A+ SS+++N+ + + V++SS +++++ +L ++ + SS++
Sbjct: 3080 TSTPITSSSVLNSST-AITSSSIVNSSTPITSSSVLNSSTAITSSSILNSSTPIT-SSSI 3137
Query: 996 LNS 998
LNS
Sbjct: 3138 LNS 3140
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/63 (30%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 937 TKSPCDSSVTQHSANGAMPSSNVINTGMSL-GNQVMSSSASMSTTGLLGANQVHSGSSNL 995
T +P SS +S+ A+ SS +NT + + V++SS +++++ +L ++ + SS++
Sbjct: 3308 TSTPITSSSVLNSST-AITSSTALNTSTPITSSSVLNSSTAITSSSILNSSTPVT-SSSV 3365
Query: 996 LNS 998
LNS
Sbjct: 3366 LNS 3368
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 937 TKSPCDSSVTQHSANGAMPSSNVINTGMSL-GNQVMSSSASMSTTGLLGANQVHSGSSNL 995
T +P SS +S+ + SS V+NT + + V++SS ++++ +L ++ + SS++
Sbjct: 1196 TSTPITSSTVVNSST-PITSSTVLNTSTPITSSSVLNSSTPITSSSILNSSTPIT-SSSV 1253
Query: 996 LNS 998
LNS
Sbjct: 1254 LNS 1256
>SPAC821.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 485
Score = 29.1 bits (62), Expect = 4.8
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Query: 946 TQHSANGAMPSSNVINTGMSLGNQVMSSSASMSTTGLLGANQVHSGSSNLLNSQGKGVEL 1005
TQH+ +T M+ G+ + S+S + TG+ G ++ HS S+ G
Sbjct: 287 TQHNHMPKTTPLRGTSTVMN-GSPIGPYSSSSNATGMYGVSKGHSSSTRRPFFSDVGSSQ 345
Query: 1006 DDPRYYNLNKDRKRKYDGTEESAYDAEEEARRLNKPVLNVPSTPLNDK 1053
+ + R+ D D+E RR+ L+ P L+DK
Sbjct: 346 PAEEFVGSSSSHGRQQDSYIADDSDSERSYRRVRDQYLSKPR--LSDK 391
>SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 730
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 706 SNAVMADYLANRIPPPAHSSTTNQQQNGSYFDFERWNLPPPP 747
SN V+ +Y N P P + +N QQ+ S +++ LP PP
Sbjct: 415 SNEVVENYDVNP-PLPLNPLPSNTQQSESTYEYSARQLPKPP 455
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 958 NVINTGMSLGNQVMSSSASMSTTGLLGANQVHSGSSNLLNSQGKG-VELDDPRYYNLNKD 1016
N++ S+G++ ++++ T LL N V G+ L + G G +++ D N+NK
Sbjct: 241 NIVGQYRSMGSKTSGNTSATFRTVLLANNVVLLGNKPGLGNVGGGALDITDADIRNINKL 300
Query: 1017 RKRK 1020
++K
Sbjct: 301 ARKK 304
>SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation factor
CPSF-73 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 797
Score = 28.7 bits (61), Expect = 6.4
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 1003 VELDDPRYYNLNKDRKRKYDGTEESAYDAEEEARRLNKPVLNVPSTPLNDKAKKGRTTPL 1062
VE+ P K+ K DG +E + +EE L PVLN T +D A+ R PL
Sbjct: 672 VEISKPSEEEDKKEEVEKKDGDKERNEEKKEEKETL--PVLNA-LTLRSDLARAPRAAPL 728
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 28.3 bits (60), Expect = 8.4
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 940 PCDSSVTQHSANGAMPSSNVINTGMSLGNQVMSSSASMSTTGLLGANQVH---SGSSNLL 996
P +SS S+ ++PSS ++++ G QV ++ T H S SSN
Sbjct: 416 PANSSPLAASSTKSLPSSELLDSSSDKGQQVFKGQHEVAGTNSFEDPNSHFNVSNSSNHE 475
Query: 997 NSQGKGVELDDPRYYNLNKD 1016
+ K L P++ + D
Sbjct: 476 EASPKKEVLKSPQFQRRSLD 495
>SPBP8B7.17c |||phosphomethylpyrimidine kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 506
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 1110 SSHGSNLAYGIYGATDSDSANRKLQQMNKSHQQVTSTTGQMDGTRPLEEMPYQSGEFV 1167
S+ SNLA G+ T + +A Q+ + + +D L +PY+ GEF+
Sbjct: 235 SAVASNLAIGLDLVTATQNAVSYTQRALEMSFHLGRGANSLDYASALTRLPYEKGEFI 292
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.127 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,276,059
Number of Sequences: 5004
Number of extensions: 190671
Number of successful extensions: 574
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 495
Number of HSP's gapped (non-prelim): 93
length of query: 1465
length of database: 2,362,478
effective HSP length: 82
effective length of query: 1383
effective length of database: 1,952,150
effective search space: 2699823450
effective search space used: 2699823450
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 60 (28.3 bits)
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