Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000976-TA|BGIBMGA000976-PA|undefined
(1465 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein. 68 3e-10
AK025577-1|BAB15176.1| 724|Homo sapiens protein ( Homo sapiens ... 56 7e-07
BC112935-1|AAI12936.1| 1699|Homo sapiens QSER1 protein protein. 55 2e-06
Y10351-1|CAA71377.1| 711|Homo sapiens nuclear protein SDK3 prot... 36 1.1
AF112222-1|AAF17209.1| 717|Homo sapiens nuclear protein SDK3 pr... 36 1.1
U77718-1|AAB48304.1| 743|Homo sapiens pinin protein. 35 2.5
AF195139-1|AAG33941.1| 717|Homo sapiens pinin protein. 34 4.4
BC062602-1|AAH62602.1| 717|Homo sapiens pinin, desmosome associ... 33 5.8
AK223612-1|BAD97332.1| 717|Homo sapiens pinin, desmosome associ... 33 5.8
BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein. 33 7.6
>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
Length = 1217
Score = 67.7 bits (158), Expect = 3e-10
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 8/212 (3%)
Query: 1245 PFDDCNFIEKRMLETQMYQENFEVYIQTLISHALDPNFLTEIFQEQDEYFLSNVKTVDE- 1303
P +D + R+L+T+ +E + Y++ L+S ALDP+ + + DE +L ++ +D
Sbjct: 1010 PSEDERAVPGRLLKTRAMREMYRSYVEMLVSTALDPDMIQALEDTHDELYLPPMRKIDGL 1069
Query: 1304 VTESMXXXXXXXXXXXXXXXXXXTWPNLSV-TAGAGSCRACARPAVATLLLFGQPYNPAT 1362
+ E T+P L V +G GS L G+PYN T
Sbjct: 1070 LNEHKKKVLKRLSLSPALQDALHTFPQLQVEQSGEGS----PEEGAVRLRPAGEPYNRKT 1125
Query: 1363 LDPVQPDARLAYEKEFLVCATCCGRVQLYSRISHQKYLMYVECSKRVAEKRMQNPSKDTT 1422
L ++ A +EF V G LY + H KY ++ C +
Sbjct: 1126 LSKLKRSVVRA--QEFKVELEKSGYYTLYHSLHHYKYHTFLRCRDQTLAIEGGAEDLGQE 1183
Query: 1423 VILNELLADEAWLSQLFRDVRHSWAEAESWER 1454
++ + + ++ WL QLF A+A++ R
Sbjct: 1184 EVVQQCMRNQPWLEQLFDSFSDLLAQAQAHSR 1215
>AK025577-1|BAB15176.1| 724|Homo sapiens protein ( Homo sapiens cDNA:
FLJ21924 fis, clone HEP04086. ).
Length = 724
Score = 56.4 bits (130), Expect = 7e-07
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 7/191 (3%)
Query: 1255 RMLETQMYQENFEVYIQTLISHALDPNFLTEIFQEQDEYFLSNVKTVD-EVTESMXXXXX 1313
R L T+ +E F+ Y++ L+S ALDP+ + + + DE L ++K +D + ++
Sbjct: 503 RFLNTRAMKETFKSYMELLVSIALDPDTMQALEKSNDELLLPHMKKIDGMLNDNRKRLLL 562
Query: 1314 XXXXXXXXXXXXXTWPNLSVTAGAGSCRACARPAVATLLLFGQPYNPATLDPVQPDARLA 1373
++P L++ ++ A++ + + G+ YN TL + + A
Sbjct: 563 NLHLDQSFKNALESFPELTIITRDSKAKS-GGTAISKIKMNGKAYNKKTLRTSKTTTKSA 621
Query: 1374 YEKEFLVCATCCGRVQLYSRISHQKYLMYVECSKRVAEKRMQNPSKDTTVILNELLADEA 1433
+EF V LY + H KY +Y+ C V + K+ + E LA
Sbjct: 622 --QEFAVDPEKIQLYSLYHSLHHYKYHVYLICKDEVLSSHLL--KKNVFQNVKETLAIVF 677
Query: 1434 WLSQLFRDVRH 1444
W S L R V++
Sbjct: 678 W-SVLKRVVKY 687
>BC112935-1|AAI12936.1| 1699|Homo sapiens QSER1 protein protein.
Length = 1699
Score = 54.8 bits (126), Expect = 2e-06
Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 4/157 (2%)
Query: 1255 RMLETQMYQENFEVYIQTLISHALDPNFLTEIFQEQDEYFLSNVKTVD-EVTESMXXXXX 1313
R L T+ +E F+ Y++ L+S ALDP+ + + + DE L ++K +D + ++
Sbjct: 1538 RFLNTRAMKETFKSYMELLVSIALDPDTMQALEKSNDELLLPHMKKIDGMLNDNRKRLLL 1597
Query: 1314 XXXXXXXXXXXXXTWPNLSVTAGAGSCRACARPAVATLLLFGQPYNPATLDPVQPDARLA 1373
++P L++ ++ A++ + + G+ YN TL + + A
Sbjct: 1598 NLHLDQSFKNALESFPELTIITRDSKAKS-GGTAISKIKMNGKAYNKKTLRTSKTTTKSA 1656
Query: 1374 YEKEFLVCATCCGRVQLYSRISHQKYLMYVECSKRVA 1410
+EF V LY + H KY +Y+ C ++
Sbjct: 1657 --QEFAVDPEKIQLYSLYHSLHHYKYHVYLICKDEIS 1691
>Y10351-1|CAA71377.1| 711|Homo sapiens nuclear protein SDK3 protein.
Length = 711
Score = 35.9 bits (79), Expect = 1.1
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 933 QNDLTKSPCDSSVTQHSANGAMPSSNVINTGMSLGNQVMSSSASMSTTGLLG---ANQVH 989
+N +KS SS + S++ + SS+ ++ + SSS+S ST+G G ++
Sbjct: 561 RNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSGRDSSSSTS 620
Query: 990 SGSSNLLNSQGKGVELDDPRYYNLNKDRKRK-YDGTEES 1027
S S + S+G+G D R + + DRKR+ G E S
Sbjct: 621 SSSESRSRSRGRGHNRD--RKHRRSVDRKRRDTSGLERS 657
>AF112222-1|AAF17209.1| 717|Homo sapiens nuclear protein SDK3
protein.
Length = 717
Score = 35.9 bits (79), Expect = 1.1
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 933 QNDLTKSPCDSSVTQHSANGAMPSSNVINTGMSLGNQVMSSSASMSTTGLLG---ANQVH 989
+N +KS SS + S++ + SS+ ++ + SSS+S ST+G G ++
Sbjct: 567 RNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSGRDSSSSTS 626
Query: 990 SGSSNLLNSQGKGVELDDPRYYNLNKDRKRK-YDGTEES 1027
S S + S+G+G D R + + DRKR+ G E S
Sbjct: 627 SSSESRSRSRGRGHNRD--RKHRRSVDRKRRDTSGLERS 663
>U77718-1|AAB48304.1| 743|Homo sapiens pinin protein.
Length = 743
Score = 34.7 bits (76), Expect = 2.5
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 933 QNDLTKSPCDSSVTQHSANGAMPSSNVINTGMSLGNQVMSSSASMSTTGLL---GANQVH 989
+N TKS SS + S++ + SS+ ++ + SSS+S ST+G ++
Sbjct: 593 RNRTTKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTS 652
Query: 990 SGSSNLLNSQGKGVELDDPRYYNLNKDRKRK-YDGTEES 1027
S S + S+G+G D R + + DRKR+ G E S
Sbjct: 653 SSSESRSRSRGRGHNRD--RKHRRSVDRKRRDTSGLERS 689
>AF195139-1|AAG33941.1| 717|Homo sapiens pinin protein.
Length = 717
Score = 33.9 bits (74), Expect = 4.4
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 933 QNDLTKSPCDSSVTQHSANGAMPSSNVINTGMSLGNQVMSSSASMSTTGLL---GANQVH 989
+N +KS SS + S++ + SS+ ++ + SSS+S ST+G ++
Sbjct: 567 RNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTS 626
Query: 990 SGSSNLLNSQGKGVELDDPRYYNLNKDRKRK-YDGTEESAYDAEEEARRLNK 1040
S S + S+G+G D R + + DRKR+ G E S ++ + R K
Sbjct: 627 SSSESRSRSRGRGHNRD--RKHRRSVDRKRRDTSGLERSPKSSKGGSSRDTK 676
>BC062602-1|AAH62602.1| 717|Homo sapiens pinin, desmosome associated
protein protein.
Length = 717
Score = 33.5 bits (73), Expect = 5.8
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 933 QNDLTKSPCDSSVTQHSANGAMPSSNVINTGMSLGNQVMSSSASMSTTGLL---GANQVH 989
+N +KS SS + S++ + SS+ ++ + SSS+S ST+G ++
Sbjct: 567 RNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTS 626
Query: 990 SGSSNLLNSQGKGVELDDPRYYNLNKDRKRK-YDGTEES 1027
S S + S+G+G D R + + DRKR+ G E S
Sbjct: 627 SSSESRSRSRGRGHNRD--RKHRRSVDRKRRDTSGLERS 663
>AK223612-1|BAD97332.1| 717|Homo sapiens pinin, desmosome associated
protein variant protein.
Length = 717
Score = 33.5 bits (73), Expect = 5.8
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 933 QNDLTKSPCDSSVTQHSANGAMPSSNVINTGMSLGNQVMSSSASMSTTGLL---GANQVH 989
+N +KS SS + S++ + SS+ ++ + SSS+S ST+G ++
Sbjct: 567 RNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTS 626
Query: 990 SGSSNLLNSQGKGVELDDPRYYNLNKDRKRK-YDGTEES 1027
S S + S+G+G D R + + DRKR+ G E S
Sbjct: 627 SSSESRSRSRGRGHNRD--RKHRRSVDRKRRDTSGLERS 663
>BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein.
Length = 600
Score = 33.1 bits (72), Expect = 7.6
Identities = 13/39 (33%), Positives = 25/39 (64%)
Query: 1245 PFDDCNFIEKRMLETQMYQENFEVYIQTLISHALDPNFL 1283
P +D + R+L+T+ +E + Y++ L+S ALDP+ +
Sbjct: 465 PSEDERAVPGRLLKTRAMREMYRSYVEMLVSTALDPDMI 503
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.312 0.127 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,258,458
Number of Sequences: 224733
Number of extensions: 6356109
Number of successful extensions: 11543
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 11509
Number of HSP's gapped (non-prelim): 25
length of query: 1465
length of database: 73,234,838
effective HSP length: 99
effective length of query: 1366
effective length of database: 50,986,271
effective search space: 69647246186
effective search space used: 69647246186
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 72 (33.1 bits)
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