Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000976-TA|BGIBMGA000976-PA|undefined
(1465 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g21840.1 68415.m02595 CHP-rich zinc finger protein, putative 32 3.3
At3g30560.1 68416.m03867 hypothetical protein 31 4.3
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 31 4.3
At2g22300.1 68415.m02646 ethylene-responsive calmodulin-binding ... 31 4.3
At2g33530.1 68415.m04110 serine carboxypeptidase S10 family prot... 31 5.7
At1g15130.1 68414.m01807 hydroxyproline-rich glycoprotein family... 31 5.7
At1g10390.1 68414.m01171 nucleoporin family protein contains Pfa... 31 5.7
At5g05750.1 68418.m00633 DNAJ heat shock N-terminal domain-conta... 31 7.6
At3g50370.1 68416.m05508 expressed protein 31 7.6
At1g10620.1 68414.m01204 protein kinase family protein contains ... 31 7.6
>At2g21840.1 68415.m02595 CHP-rich zinc finger protein, putative
Length = 746
Score = 31.9 bits (69), Expect = 3.3
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 1379 LVCATCCGRVQLYSRISHQKYLMYVECSKRVAEKRMQNP 1417
L CA R LY SH+ L YVE ++RVA++R++ P
Sbjct: 227 LRCADALLRGLLYK--SHEHRLFYVESTRRVADERVKQP 263
>At3g30560.1 68416.m03867 hypothetical protein
Length = 1473
Score = 31.5 bits (68), Expect = 4.3
Identities = 31/123 (25%), Positives = 46/123 (37%), Gaps = 19/123 (15%)
Query: 1143 VTSTTGQMDGTRPLEEMPYQSGEFVALKTDLNDMWPAIWRVDGKTLLQKYEPFEENGKVL 1202
VT T G +P+ ++ E V + + ++ W L K +P E K+L
Sbjct: 773 VTKLTFHEKGKQPIYVKEGETAESVLYRVNDDETQFTAWFE-----LNKRDP--EAAKLL 825
Query: 1203 YRNISTYTVWNPENKKL------------YTQVPVKVRSQTHLETTVELIRSEMPFDDCN 1250
Y I + WN ++K VP K+ HL + IR FDD
Sbjct: 826 YEQIPNFYTWNGKDKNFRRRKMPGFVVGRINHVPPKIDDAYHLRILINNIRGPKGFDDIK 885
Query: 1251 FIE 1253
IE
Sbjct: 886 TIE 888
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 31.5 bits (68), Expect = 4.3
Identities = 36/136 (26%), Positives = 45/136 (33%), Gaps = 16/136 (11%)
Query: 143 SHQTLAAQGAS-FFDQSSTPGSTTGL----SWQGNNQLPSPFGILPHEXXXXXXXXXXXX 197
S A G+S FF SS+ GST L S PSPFG+
Sbjct: 267 SPSIFGATGSSPFFGSSSSAGSTPSLFASSSSGATTSSPSPFGVSTFNSSSTSNTS---- 322
Query: 198 XXXXXYENFNAHFAAAQTINNHLNSQISSTGKQANRSGSPATATKXXXXXXXXXXXXXXX 257
N +A +A T + L S SST S P TA+
Sbjct: 323 -------NASASPFSASTGFSFLKSTASSTTSSTTPSAPPQTASSSSSFSFGTSANSGFN 375
Query: 258 XXXGNQTDNSYSTSSA 273
G+ + STS A
Sbjct: 376 LSTGSSAAPASSTSGA 391
Score = 30.7 bits (66), Expect = 7.6
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 931 YGQNDLTKSPCDSSVTQHSANGAMPSSNVINTGMSLGNQVMSSSASMSTTGL-LGANQVH 989
+G + T S SS T + SSN +TG G+ V S+ AS +T GA+
Sbjct: 17 FGSSSATNSSSASSTTSPLSFSFNQSSNPSSTGFGFGSSVSSTPASSTTPSFGFGASSTP 76
Query: 990 S 990
S
Sbjct: 77 S 77
>At2g22300.1 68415.m02646 ethylene-responsive calmodulin-binding
protein, putative (SR1) identical to partial sequence of
ethylene-induced calmodulin-binding protein GI:11545505
from [Arabidopsis thaliana]; contains Pfam profiles
PF03859: CG-1 domain, PF00612: IQ calmodulin-binding
motif, and PF00023: Ankyrin repeat
Length = 1032
Score = 31.5 bits (68), Expect = 4.3
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 748 PKMFPGASAFGSHATNFANQHQALAMP-HGHALTYFPPFH---LGPHPEFQSSVELTPL 802
P++ SA+ H ++ A HQ L P G LT F P++ L P +Q + P+
Sbjct: 199 PELEDAESAYNQHGSSTAYSHQELQQPATGGNLTGFDPYYQISLTPRDSYQKELRTIPV 257
>At2g33530.1 68415.m04110 serine carboxypeptidase S10 family protein
similar to Serine carboxypeptidase II chains A and B
(SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)
Length = 465
Score = 31.1 bits (67), Expect = 5.7
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 1194 PFEENGKVLYRNISTYTVWNPENKKLYTQVPVKVR-SQTHLETTVELIRSEMPF-DDCNF 1251
PF G +L RN + WN E LY + PV V S + ++ E + ++ D+ F
Sbjct: 101 PFRPKGSILVRNQHS---WNQEANMLYLETPVGVGFSYANESSSYEGVNDKITAKDNLVF 157
Query: 1252 IEKRMLETQMYQENFEVYI--QTLISHALDPNFLTEIFQEQDEYFLSNVKTV 1301
++K L+ Y N ++I ++ H + P + Q ++ L N+K +
Sbjct: 158 LQKWFLKFPQYL-NRSLFITGESYAGHYV-PQLAQLMIQYNKKHNLFNLKGI 207
>At1g15130.1 68414.m01807 hydroxyproline-rich glycoprotein family
protein
Length = 846
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Query: 502 HGSSPAYPMYHSPMNSINSPQPHNDHYNKLAPRSPLDASVARPPSQNSQVAY 553
H SS YP H P S P P + + P +P RPP Q S+ Y
Sbjct: 730 HRSSGPYPSVHQPTASSPPPPPETQNPSHPHPHAP----YYRPPEQMSRPGY 777
>At1g10390.1 68414.m01171 nucleoporin family protein contains Pfam
profiles: PF04096 nucleoporin autopeptidase, PF03093
nucleoporin FG repeat family
Length = 1041
Score = 31.1 bits (67), Expect = 5.7
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 59 TASLAGQLGSSTASPFNPGGFLSPPSVGYDAMFS 92
T S GQ G S+A F + PS G+ MFS
Sbjct: 558 TGSAFGQFGQSSAPAFGQNSIFNKPSTGFGNMFS 591
>At5g05750.1 68418.m00633 DNAJ heat shock N-terminal domain-containing
protein similar to SP|Q9QYI4 DnaJ homolog subfamily B
member 12 Mus musculus; contains Pfam profile PF00226
DnaJ domain
Length = 294
Score = 30.7 bits (66), Expect = 7.6
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Query: 1014 NKDRKRKYDGT--EESAYDAEEEARRLN 1039
N+D +RKYDG+ +E AY +ARR N
Sbjct: 167 NEDTRRKYDGSGSDEPAYQPRRDARRNN 194
>At3g50370.1 68416.m05508 expressed protein
Length = 2179
Score = 30.7 bits (66), Expect = 7.6
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Query: 506 PAYPMYHSPMNSINSPQPHNDHYNKLAPRSPLDASVARPPSQNSQVAYPSVITRALGIEQ 565
P +P + S + + PQP + +L SP+ V PP +S V + T AL
Sbjct: 1165 PLHPQFGSSLTHMQQPQPPLIQFGQLPYTSPISQGVL-PPPHHSVVQANGLSTYALNQNP 1223
Query: 566 NKTYTENRYDRNSSS 580
T NS++
Sbjct: 1224 GSLVTVQLGQGNSAN 1238
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 30.7 bits (66), Expect = 7.6
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 968 NQVMSSSASMSTTGLLGANQVHSGSSNLLNSQGKG 1002
N+V SSS+S S L G+N HSG SN N+ G
Sbjct: 212 NRVPSSSSSPSPPSLSGSNN-HSGGSNRHNANSNG 245
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.312 0.127 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,960,017
Number of Sequences: 28952
Number of extensions: 983983
Number of successful extensions: 2351
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2344
Number of HSP's gapped (non-prelim): 14
length of query: 1465
length of database: 12,070,560
effective HSP length: 90
effective length of query: 1375
effective length of database: 9,464,880
effective search space: 13014210000
effective search space used: 13014210000
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 66 (30.7 bits)
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