Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000975-TA|BGIBMGA000975-PA|IPR001194|DENN,
IPR005113|uDENN, IPR005112|dDENN, IPR001024|Lipoxygenase, LH2,
IPR004012|RUN, IPR008994|Nucleic acid-binding, OB-fold
(1253 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical pr... 308 2e-83
AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical ... 68 4e-11
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 65 3e-10
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 65 3e-10
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 65 3e-10
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu... 54 6e-07
Z48582-7|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 46 1e-04
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 46 1e-04
Z50028-5|CAA90338.1| 661|Caenorhabditis elegans Hypothetical pr... 44 0.001
AL032624-4|CAA21522.1| 661|Caenorhabditis elegans Hypothetical ... 44 0.001
Z81055-7|CAB02897.2| 445|Caenorhabditis elegans Hypothetical pr... 36 0.14
U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical pr... 33 1.7
AF067936-6|AAC19214.1| 348|Caenorhabditis elegans Ground-like (... 33 1.7
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 5.2
AL032644-1|CAA21666.2| 604|Caenorhabditis elegans Hypothetical ... 31 5.2
Z70206-1|CAA94124.1| 407|Caenorhabditis elegans Hypothetical pr... 30 9.1
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr... 30 9.1
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase... 30 9.1
U39655-3|AAA80409.2| 718|Caenorhabditis elegans Fatty acid coa ... 30 9.1
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi... 30 9.1
CU457741-2|CAM36343.1| 574|Caenorhabditis elegans Hypothetical ... 30 9.1
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 30 9.1
AF043695-2|AAB97544.2| 574|Caenorhabditis elegans Hypothetical ... 30 9.1
>U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical
protein C52E12.4 protein.
Length = 1487
Score = 308 bits (756), Expect = 2e-83
Identities = 208/652 (31%), Positives = 326/652 (50%), Gaps = 51/652 (7%)
Query: 1 MSVPDLSVSCRFADYFAICGLDFDSGL------EPDRLCGDNLHVS------PLDRSYKG 48
MS + DYFA+ G D D GL +P ++ S PL RS+
Sbjct: 1 MSSNTTDIDVTLVDYFAVAGYDPDIGLVVDTKYDPGHTPCESPGSSAPEFRPPLQRSFVA 60
Query: 49 KILAHYPENVPSNQFDEHATCMLCLPAGLQFRTQKHSLEP-QFHSFVVTRENASRYYGFS 107
KI+ H+P+ P N F + LC+P GL+F T+K + H+F +E+ SR G +
Sbjct: 61 KIINHFPQRRPGNPFSDDIL-HLCMPRGLRFYTEKDVPKKLMIHTFANIKEDGSRINGTA 119
Query: 108 LIFYEEVRNKNICSAMHTLQAMYITELSSG-------QTPPGHRKSSGKESSRSLPRSFK 160
L FYEEV++ IC AM LQ ++ E+++ Q H + + +LPR+ +
Sbjct: 120 LTFYEEVKDLAICDAMAQLQQDHVREITARHNGIIEKQQRIHHPPGTVSGGTHTLPRNRR 179
Query: 161 LTPHTGAALTYFDIA-KDKLYVAKSIALICQYPFVRVAQMFLENLFRSLPRQPGPGLSPE 219
++Y++ + LY++++I ++ + P V + L L + + P L E
Sbjct: 180 ---DRSKRISYYEGGGHNSLYMSRTICVLSRLPLVNSTRALLTALHQIIASPSSPHLPLE 236
Query: 220 SYVYNLLYEVPVPLPGQALRLYVPPPQPHLEAIPVVIRMPNPPEELPLLDYSLRVMFSNL 279
SY+Y LYEVP+P P L+ +P L +V++ P P +ELP D S+ +F L
Sbjct: 237 SYIYWCLYEVPLPSPSMTLK--IP-----LLGTTLVVQRPGP-KELPFFDDSIGSIFDYL 288
Query: 280 GVELVVQLFTCVLLEHQVLLRSTDYNKLMLVSECMVSLLLPFTWAHVYVPILPAPLYHFL 339
VE ++LF+C LLEHQ+LL S D ++LM V E +++L PF W Y P+LP F
Sbjct: 289 PVEKFIRLFSCFLLEHQILLCSKDLSRLMTVCESLLALSFPFRWQMTYAPVLPYSKLDFF 348
Query: 340 DAPVPFVMGLHTDSAAVCANGPRSIALCSEAALCLVDIDKPDIQLPEELPIFPHRTSFIE 399
+APVP+VMG + + P + ++ +C+VD+D +LPE++P+FP
Sbjct: 349 EAPVPYVMGWYYEDTV-----PEEL---FQSNVCVVDLDTGRSELPEDVPVFPGARQLAT 400
Query: 400 ELNHLMDKY-QIQRPETEPTKLSAP----LNGTSYRHMN---DNMSSSCTLPSGGLRRKH 451
++ + +++ + T S P + G R N ++ ++ S L
Sbjct: 401 DIKNSLERLSDSDKMLTSTLDRSEPEEVVVGGVKMRRKNKRPEDWAAKRMSRSFDLEDGS 460
Query: 452 SFHDVLEWEESRPLNXXXXXXXXXXXXXXXDALQRIADIVKRTGVNIDDVDAETVMPTTK 511
+ + L RP L R+A+I +R GV +D + ++ +
Sbjct: 461 AMSEELSGMMRRPSRTGLQPLPLENVLRNNSTLARVAEIARRAGVVVDVDNIKSEFADAQ 520
Query: 512 KKILNDEEQYNEDMRFNSAVRETFLNRFVHIFLMYENFVI--MPDQDRESWLSSRESMVN 569
Y D + N+A+RE LNRFV +F YE+FVI DRES+ ++RESM +
Sbjct: 521 NLDSPIARHYFVDAKVNNAIRECVLNRFVEMFYSYEHFVIGGQGCDDRESYEANRESMAD 580
Query: 570 FDKASFLSDQPQRHRPFLSRFLETQMFATLIDNKIMANWGEYDVNLQVFEYR 621
FDKASFLSDQP H FL+ FLETQMF + ID+KI++ W D + +F+ R
Sbjct: 581 FDKASFLSDQPDSHLTFLAAFLETQMFTSFIDSKILSQWETPDEGVVLFDSR 632
Score = 180 bits (438), Expect = 6e-45
Identities = 94/212 (44%), Positives = 131/212 (61%), Gaps = 9/212 (4%)
Query: 821 LRPLPESLTFDMRNVQAMTDIKTEIGYARAWVXXXXXXXXXXXXXXXXXADTTLLRSQYK 880
L PLP + +D++NV MT+IKT+IGYARA+V +++ +LR YK
Sbjct: 1037 LSPLPTHVAYDLKNVLRMTEIKTDIGYARAFVRLALERKLLHKHLGALLSNSRVLRELYK 1096
Query: 881 RTAFLRCEEEREQFLYHLLTLNAVDYYCFTNTYPTTKLPYRVLIMPSRKASQTTANCWIS 940
AF+ +EE+EQFL+H+L+LNA + CFTNT+ TK+ Y+V+I+ A W++
Sbjct: 1097 PYAFVGSDEEKEQFLFHILSLNAAQFRCFTNTFTKTKMDYQVVIVTGSGRGAIPA-IWVT 1155
Query: 941 ISGMNGESTPKIPIPRNTNEFVFHHKNLGTLSTLRIGHDNSGLSPRWLLDQVYVRNEVTG 1000
+ G + STP I + NT F F HKNLG LSTLRIGH S +W L+ V VRNE+TG
Sbjct: 1156 VEG-SLCSTPPIMLKPNTPLFKFDHKNLGILSTLRIGHQQSEKPVQWFLEYVLVRNEITG 1214
Query: 1001 HTYTYPC------NRWLGSGVDDGSTERLLVA 1026
TY +PC +RW G+G +D + ER+LVA
Sbjct: 1215 QTYKFPCSKKFGEDRWFGNG-EDITLERMLVA 1245
Score = 113 bits (272), Expect = 8e-25
Identities = 53/103 (51%), Positives = 75/103 (72%), Gaps = 1/103 (0%)
Query: 665 IAQNNRTFVEKLLKECKSKTKRMLLEKMGTEESNLGFGSEVSITGVEESTMIASLCDLLE 724
IAQ FV++LLKE K+KTKRML++KMG E LG + ITGVEE+T++AS CDLLE
Sbjct: 757 IAQQQYAFVQQLLKETKAKTKRMLVDKMGKEAVQLGH-LDAGITGVEENTLVASFCDLLE 815
Query: 725 RLWSHGLQHKMGKSALWMHLINYQELEQCSNSTKPIDPNYLTP 767
R+W+HGL++K GKS+LW ++ +Q+ E+ +T+ + LTP
Sbjct: 816 RIWAHGLKNKHGKSSLWNFVLQHQDFEKPGLTTRASSTSMLTP 858
Score = 109 bits (262), Expect = 1e-23
Identities = 72/197 (36%), Positives = 109/197 (55%), Gaps = 17/197 (8%)
Query: 1058 IQHMIGDCVNAIVKWHYQSKRDKDANSLSVLLCGENGLVKCLEQAFLCGFKSARF-FGKN 1116
++H++G+ VNA+VK+ ++ K + L+ LLCG+ GLV +EQAF G + + + +N
Sbjct: 1306 VEHLLGEAVNALVKYFCSERKVK--SELAHLLCGQKGLVLAIEQAFQLGRQESLLKYFRN 1363
Query: 1117 FFIWDYFARVKDEFKMSLCDEPSTMNNKNCGGVSYNCRQDQEHRAIWRCYCHLMDEVNSV 1176
WDY RV F LC K + ++ H A+ R Y +
Sbjct: 1364 TCPWDYIERVCSWF-FELC------RKKEVDKLPKE-QKTMIHHAL-RLYRKI-----DA 1409
Query: 1177 GRSLGKDGKFQLFICLSLREHWLHRMLVPMSLTRVTAEMYEEQSFLRKHGLLTFLKQILE 1236
SLGKDGKF +F+ LS+R+H L +L M + VTA+MY E SFLR +T+L +++
Sbjct: 1410 KTSLGKDGKFHVFVLLSIRDHILPGLLPLMRYSPVTADMYNEPSFLRTPAHMTYLAKLMY 1469
Query: 1237 PLDEFDIVLENSLTQGI 1253
L EF+I ++ SLT GI
Sbjct: 1470 SLSEFNITIDPSLTYGI 1486
>AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical
protein F52C12.4 protein.
Length = 1635
Score = 68.1 bits (159), Expect = 4e-11
Identities = 59/180 (32%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 173 DIAKDKLYVAK-SIALICQYPFVRVAQMFLENLFR--SLPRQPGPGLSPESYVYNLLYEV 229
D A D L+ SI LI ++PF + FL L R S P P + E Y+ +L+YEV
Sbjct: 339 DPADDILFYKNVSICLISRFPFFNSFKRFLFFLHRMSSTPSCSHP-VPIERYISHLMYEV 397
Query: 230 PVPLPGQALRLYVPPPQPHLEAIPVVIRMPNPPEELPLLDYSLRVMFSNLGVELVVQLFT 289
P P + R+++ Q E I + +LPL L LG E ++ L
Sbjct: 398 SFPTPRRP-RVFM---QLGAENISFD---SHDDSQLPLNGAQLIDTLKYLGSENLMYLML 450
Query: 290 CVLLEHQVLLRSTDYNKLMLVSECMVSLLLPFTWAHVYVPILPAPLYHFLDAPVPFVMGL 349
LLE ++L+ S L V+E + +L+ PF W Y+P P L L AP+PF+ G+
Sbjct: 451 LALLEQKILIHSLRPWMLAAVAESVCALMFPFHWQCPYIPQCPLGLAGVLHAPLPFIAGV 510
Score = 41.5 bits (93), Expect = 0.004
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 45 SYKGKILAHYPENVPSNQFDEHA----TCMLCLPAGLQFRTQKHSLEP---QFHSFVVTR 97
+YK +L ++P + S + ++ M CLP G P F +FV+T
Sbjct: 233 AYKPAVLDYFPRSDHSGEMEDFKLAQNVAMFCLPMGALIECWPTKCAPPDRSFSTFVLTD 292
Query: 98 ENASRYYGFSLIFYEE 113
EN +++YG ++ FYE+
Sbjct: 293 ENGTKFYGSAVTFYEK 308
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 65.3 bits (152), Expect = 3e-10
Identities = 53/207 (25%), Positives = 101/207 (48%), Gaps = 20/207 (9%)
Query: 225 LLYEVPVPLPGQA-LRLYVPPPQPHLEAIPVVIRMPNPPE-ELPLLDYSLRVMFSNLGVE 282
+L PVP+PG+ +++ V P + V P L+D+ L + F LG++
Sbjct: 215 MLLSSPVPVPGKTKVQIEVMPMD-----LSQVFEFALPDHTRFTLIDFPLHIPFEILGID 269
Query: 283 LVVQLFTCVLLEHQVLLRSTDYNKLMLVSECMVSLLLPFTWAHVYVPILPAPL---YHFL 339
+ +++ T +LE +++++S +YN + + +V+LL P + +P+LPA + L
Sbjct: 270 MALRVLTAAMLEFKIVIQSRNYNAVSMCILSIVALLYPLEYMFPVIPLLPAYMPSAEQLL 329
Query: 340 DAPVPFVMGLHTDSAAVCANGPRSIALCSEAALCLVDIDKPDIQLPEELPI----FPHRT 395
AP PF++G+ S+ R + + + LVD+D +Q+P++L I P T
Sbjct: 330 LAPTPFLIGV--PSSFFHHRKIREL----PSDVILVDLDTNCLQVPDDLYIPDLPEPDAT 383
Query: 396 SFIEELNHLMDKYQIQRPETEPTKLSA 422
E L + ++K + E + A
Sbjct: 384 HLKERLKNAINKMTTMTVDNETSVTDA 410
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 65.3 bits (152), Expect = 3e-10
Identities = 53/207 (25%), Positives = 101/207 (48%), Gaps = 20/207 (9%)
Query: 225 LLYEVPVPLPGQA-LRLYVPPPQPHLEAIPVVIRMPNPPE-ELPLLDYSLRVMFSNLGVE 282
+L PVP+PG+ +++ V P + V P L+D+ L + F LG++
Sbjct: 215 MLLSSPVPVPGKTKVQIEVMPMD-----LSQVFEFALPDHTRFTLIDFPLHIPFEILGID 269
Query: 283 LVVQLFTCVLLEHQVLLRSTDYNKLMLVSECMVSLLLPFTWAHVYVPILPAPL---YHFL 339
+ +++ T +LE +++++S +YN + + +V+LL P + +P+LPA + L
Sbjct: 270 MALRVLTAAMLEFKIVIQSRNYNAVSMCILSIVALLYPLEYMFPVIPLLPAYMPSAEQLL 329
Query: 340 DAPVPFVMGLHTDSAAVCANGPRSIALCSEAALCLVDIDKPDIQLPEELPI----FPHRT 395
AP PF++G+ S+ R + + + LVD+D +Q+P++L I P T
Sbjct: 330 LAPTPFLIGV--PSSFFHHRKIREL----PSDVILVDLDTNCLQVPDDLYIPDLPEPDAT 383
Query: 396 SFIEELNHLMDKYQIQRPETEPTKLSA 422
E L + ++K + E + A
Sbjct: 384 HLKERLKNAINKMTTMTVDNETSVTDA 410
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 65.3 bits (152), Expect = 3e-10
Identities = 53/207 (25%), Positives = 101/207 (48%), Gaps = 20/207 (9%)
Query: 225 LLYEVPVPLPGQA-LRLYVPPPQPHLEAIPVVIRMPNPPE-ELPLLDYSLRVMFSNLGVE 282
+L PVP+PG+ +++ V P + V P L+D+ L + F LG++
Sbjct: 215 MLLSSPVPVPGKTKVQIEVMPMD-----LSQVFEFALPDHTRFTLIDFPLHIPFEILGID 269
Query: 283 LVVQLFTCVLLEHQVLLRSTDYNKLMLVSECMVSLLLPFTWAHVYVPILPAPL---YHFL 339
+ +++ T +LE +++++S +YN + + +V+LL P + +P+LPA + L
Sbjct: 270 MALRVLTAAMLEFKIVIQSRNYNAVSMCILSIVALLYPLEYMFPVIPLLPAYMPSAEQLL 329
Query: 340 DAPVPFVMGLHTDSAAVCANGPRSIALCSEAALCLVDIDKPDIQLPEELPI----FPHRT 395
AP PF++G+ S+ R + + + LVD+D +Q+P++L I P T
Sbjct: 330 LAPTPFLIGV--PSSFFHHRKIREL----PSDVILVDLDTNCLQVPDDLYIPDLPEPDAT 383
Query: 396 SFIEELNHLMDKYQIQRPETEPTKLSA 422
E L + ++K + E + A
Sbjct: 384 HLKERLKNAINKMTTMTVDNETSVTDA 410
>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
(myotubularin) family protein 5 protein.
Length = 1744
Score = 54.0 bits (124), Expect = 6e-07
Identities = 25/84 (29%), Positives = 48/84 (57%)
Query: 266 PLLDYSLRVMFSNLGVELVVQLFTCVLLEHQVLLRSTDYNKLMLVSECMVSLLLPFTWAH 325
P+ + ++F LG + V+++ +L + +++L S+ +L ++SLL PF + H
Sbjct: 175 PVTGKDVAMLFKMLGFQNVIKIIHALLSDCRIVLASSSLMRLSRCQNAILSLLYPFEYVH 234
Query: 326 VYVPILPAPLYHFLDAPVPFVMGL 349
V ILP L L++P PF++G+
Sbjct: 235 SCVTILPDSLAEVLESPTPFLIGV 258
>Z48582-7|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein
ZK945.9 protein.
Length = 3178
Score = 46.4 bits (105), Expect = 1e-04
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 968 LGTLSTLRIGHDNSGLSPR--WLLDQVYVRNEVTGHTYTYPCNRWLGSGVDDGSTERL 1023
LG L +R+ D++GL R W +++ V++ T Y +P N WLG+ DG TERL
Sbjct: 2246 LGELEYMRLWLDDAGLDHRESWYCNRIIVKDLQTQDIYYFPFNNWLGTKNGDGETERL 2303
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 46.4 bits (105), Expect = 1e-04
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 968 LGTLSTLRIGHDNSGLSPR--WLLDQVYVRNEVTGHTYTYPCNRWLGSGVDDGSTERL 1023
LG L +R+ D++GL R W +++ V++ T Y +P N WLG+ DG TERL
Sbjct: 2246 LGELEYMRLWLDDAGLDHRESWYCNRIIVKDLQTQDIYYFPFNNWLGTKNGDGETERL 2303
>Z50028-5|CAA90338.1| 661|Caenorhabditis elegans Hypothetical
protein F46F6.1a protein.
Length = 661
Score = 43.6 bits (98), Expect = 0.001
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Query: 250 EAIPVVIRMPNPPEELPLLDYSLRVMFSNLGVELVVQLFTCVLLEHQVLLRSTDYNKLML 309
E IP R+P + L++ ++ + ++ +F +L E ++L L
Sbjct: 164 EKIPDHTRLPTLGSDKFFLEF-----YNAIDPRQMLAIFASLLKERRILFTGRKVGSLSS 218
Query: 310 VSECMVSLLLPFTWAHVYVPILPAPLYHFLDAPVPFVMGLHTDSAAVCANGPRSIALCSE 369
+ LL P W V++ ILP L + AP+P+++G+ V N +I E
Sbjct: 219 CLHAVSMLLYPMCWQSVFITILPESLVDMVMAPMPYLIGV---PKTVLENARLNIRDIGE 275
Query: 370 AALCLVDIDKPDIQLP 385
+ +VDID+ + P
Sbjct: 276 --VVIVDIDEKTLTSP 289
>AL032624-4|CAA21522.1| 661|Caenorhabditis elegans Hypothetical
protein F46F6.1a protein.
Length = 661
Score = 43.6 bits (98), Expect = 0.001
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Query: 250 EAIPVVIRMPNPPEELPLLDYSLRVMFSNLGVELVVQLFTCVLLEHQVLLRSTDYNKLML 309
E IP R+P + L++ ++ + ++ +F +L E ++L L
Sbjct: 164 EKIPDHTRLPTLGSDKFFLEF-----YNAIDPRQMLAIFASLLKERRILFTGRKVGSLSS 218
Query: 310 VSECMVSLLLPFTWAHVYVPILPAPLYHFLDAPVPFVMGLHTDSAAVCANGPRSIALCSE 369
+ LL P W V++ ILP L + AP+P+++G+ V N +I E
Sbjct: 219 CLHAVSMLLYPMCWQSVFITILPESLVDMVMAPMPYLIGV---PKTVLENARLNIRDIGE 275
Query: 370 AALCLVDIDKPDIQLP 385
+ +VDID+ + P
Sbjct: 276 --VVIVDIDEKTLTSP 289
>Z81055-7|CAB02897.2| 445|Caenorhabditis elegans Hypothetical
protein F01G10.9 protein.
Length = 445
Score = 36.3 bits (80), Expect = 0.14
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 210 RQPGPGLSPESYVYNLLYEVPVPLPG--QALRLYVPP--PQPHLEAIPVVIRMPNPP 262
R PGP P S N+L+ PVPLPG Q +R+ +PP P P A P + P+ P
Sbjct: 305 RVPGPMTLPVSSTTNMLHR-PVPLPGAPQPMRIPLPPGAPMPMPLAPPGMALPPSQP 360
>U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical
protein C43G2.2 protein.
Length = 869
Score = 32.7 bits (71), Expect = 1.7
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 619 EYRTRIVKTNSLKRIKNAKWQVKDCPPELLLGDFSRRLSTEVTPAAIAQNNRTFVEKLLK 678
EY RI K + +K + ++ + EL ++ S E+ A ++ R + LK
Sbjct: 100 EYLQRIAKLEA--DLKKKEQELAEKKEEL--ESIEKKHSKEIDSGAALEDERRKLRAELK 155
Query: 679 ECKSKTKRMLLEKMGTEESNLGFGSEVS 706
E K + +R++ E EE N+G V+
Sbjct: 156 ETKEREQRLISEYSELEEENIGLQKTVA 183
>AF067936-6|AAC19214.1| 348|Caenorhabditis elegans Ground-like (grd
related) protein 1 protein.
Length = 348
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 215 GLSPESYV-----YNLLYEVPVPLPGQALRLYVPP--PQPHLEAIPVVIRMPN 260
G SPE+++ Y + +PV LP + ++PP PQP + P +I++P+
Sbjct: 156 GYSPEAFITRPLPYRPVPYMPVQLPAACQQYFLPPQRPQPMPQVTPQIIQLPS 208
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 31.1 bits (67), Expect = 5.2
Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
Query: 209 PRQPGPGLSPESYVYNLLYEVPVPLPGQALRLYVPPPQPHLEAIPVVIRMPNPPEELPLL 268
P P P P S + N P P P A PPP P L I +P PP P L
Sbjct: 460 PTTPKPAPPPPSRIPN-----PSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPAL 514
Query: 269 DYSL 272
+ +
Sbjct: 515 EQEI 518
>AL032644-1|CAA21666.2| 604|Caenorhabditis elegans Hypothetical
protein Y51H1A.2 protein.
Length = 604
Score = 31.1 bits (67), Expect = 5.2
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 835 VQAMTDIKTEIGYARAWVXXXXXXXXXXXXXXXXXADTTLLRSQYKRTAFLRCEEEREQ 893
+ + I++EIG +RAW+ A+ T ++ Y AFLR + +Q
Sbjct: 110 IACLGQIRSEIGKSRAWIRIVLNENALGQYLDLLAAEATAIQQFYSDDAFLRLLSDGDQ 168
>Z70206-1|CAA94124.1| 407|Caenorhabditis elegans Hypothetical
protein C49F8.1 protein.
Length = 407
Score = 30.3 bits (65), Expect = 9.1
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 18/140 (12%)
Query: 274 VMFSNLGVELVVQLFTCVLLEHQ----VLLRSTDYNKLMLVSECMVSLLLPFTWAH-VYV 328
++F+N +L+ +F V ++H + S+ ++ L S LPF H Y+
Sbjct: 34 LIFTNFPAKLIYSIFRSVCVQHMNFSFLSFSSSFFHFFSLHSFFTPPPFLPFLRLHFAYI 93
Query: 329 -PIL-------PAPLYHFLDAPVPFVMGLHTDSAA---VCANGPRSIALCSEAALCLVDI 377
P P+PL+ F + P F++ H S + + R + E A+ +DI
Sbjct: 94 HPYFFSRNNFSPSPLFSFGNCPYIFILIFHASSVREHHIMNSSQRRSIMFGEKAVIEMDI 153
Query: 378 DK--PDIQLPEELPIFPHRT 395
D ++ P +L + P T
Sbjct: 154 DPFVSNLDTPADLKVPPTYT 173
>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical
protein ZK1067.1 protein.
Length = 1323
Score = 30.3 bits (65), Expect = 9.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 616 QVFEYRTRIVKTNSLKRIKNAKWQVKDCPPELLL 649
++F ++T + N R +N VK+CPPELL+
Sbjct: 299 KIFNHKTGRLVFNPDGRYQNGNHCVKECPPELLI 332
>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
protein.
Length = 1323
Score = 30.3 bits (65), Expect = 9.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 616 QVFEYRTRIVKTNSLKRIKNAKWQVKDCPPELLL 649
++F ++T + N R +N VK+CPPELL+
Sbjct: 299 KIFNHKTGRLVFNPDGRYQNGNHCVKECPPELLI 332
>U39655-3|AAA80409.2| 718|Caenorhabditis elegans Fatty acid coa
synthetase familyprotein 17 protein.
Length = 718
Score = 30.3 bits (65), Expect = 9.1
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 1163 WRCYCHLMDEVNSVGR---SLGKDGKFQLFICLSLREHWLHRMLVPMSLTRVTAEMY 1216
WR Y + VN + SLG+ K + + RE W+ L M + A MY
Sbjct: 137 WRSYAQVDKRVNMIASGLTSLGQQEKEPIILFAETREEWMTTALACMKMNFPIATMY 193
>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
kinase protein.
Length = 1374
Score = 30.3 bits (65), Expect = 9.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 616 QVFEYRTRIVKTNSLKRIKNAKWQVKDCPPELLL 649
++F ++T + N R +N VK+CPPELL+
Sbjct: 350 KIFNHKTGRLVFNPDGRYQNGNHCVKECPPELLI 383
>CU457741-2|CAM36343.1| 574|Caenorhabditis elegans Hypothetical
protein C42C1.2 protein.
Length = 574
Score = 30.3 bits (65), Expect = 9.1
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 614 NLQVFEYRTRIVKTNSLKRIKNAKWQVKDCPPELLLGDFSRRLSTEVTPAA 664
++ +F + K N+ +++ NA DC L+ D SR LS ++TPA+
Sbjct: 305 HITIFPNSINVEKINNTRKLSNAG----DCRAILVTSDGSRALSKDLTPAS 351
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 30.3 bits (65), Expect = 9.1
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 202 ENLFRSLPRQPGPGLSPESYVYNLLYEVPVPLPGQALR-LYVPP---PQPHLEAIPVVIR 257
+N RSLP P L P L+ P LP LR L P P+P L A+P+++
Sbjct: 319 QNQLRSLPALPLILLQPSRQALPLILLQP-SLPQNQLRSLPAHPRILPRPSLPALPLILL 377
Query: 258 MPNPPE 263
P+ P+
Sbjct: 378 QPSLPQ 383
>AF043695-2|AAB97544.2| 574|Caenorhabditis elegans Hypothetical
protein C42C1.2 protein.
Length = 574
Score = 30.3 bits (65), Expect = 9.1
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 614 NLQVFEYRTRIVKTNSLKRIKNAKWQVKDCPPELLLGDFSRRLSTEVTPAA 664
++ +F + K N+ +++ NA DC L+ D SR LS ++TPA+
Sbjct: 305 HITIFPNSINVEKINNTRKLSNAG----DCRAILVTSDGSRALSKDLTPAS 351
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.136 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,184,265
Number of Sequences: 27539
Number of extensions: 1367460
Number of successful extensions: 3196
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3152
Number of HSP's gapped (non-prelim): 37
length of query: 1253
length of database: 12,573,161
effective HSP length: 90
effective length of query: 1163
effective length of database: 10,094,651
effective search space: 11740079113
effective search space used: 11740079113
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)
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