GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000974-TA|BGIBMGA000974-PA|IPR001245|Tyrosine protein
kinase, IPR008266|Tyrosine protein kinase, active site,
IPR000719|Protein kinase, IPR011009|Protein kinase-like
         (153 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...   138   2e-35
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   1.2  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score =  138 bits (334), Expect = 2e-35
 Identities = 64/151 (42%), Positives = 95/151 (62%), Gaps = 1/151 (0%)

Query: 1   MAYLERHNYIHRDLAARNCLVGDENVVKVADFGLARYVLDDQ-YTSSGGTKFPIKWAPPE 59
           M +L +   +HRDLAARN LV + + VKV+DFGL+R V  D  Y  +GG K P++W   E
Sbjct: 605 MEHLAKTRVVHRDLAARNVLVCENHTVKVSDFGLSRDVYQDNVYCKNGGGKLPVRWMALE 664

Query: 60  VLNFTRFSSKSDVWAFGVLMWEVFTCGKVPYGRLTNSEVVDKVQRGQVLEKPKGCINEIY 119
            L   R+++ SDVW+FGVL+WE+ T G  PY  + +SE++D ++ G  L +P  C  ++Y
Sbjct: 665 SLTHQRYTTYSDVWSFGVLLWEIVTLGGTPYVGVHSSELLDFLKSGNRLARPANCSPDLY 724

Query: 120 NVMRACWGHTPEERPSFRVLKEQLAVISQSV 150
            VM  CW   P+ RP+F  L + L  + ++V
Sbjct: 725 AVMLNCWKECPKNRPTFTELSKSLEGLLENV 755


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 97  EVVDKVQRGQVLEKPKGCINEIYNVMRACWG 127
           E+VDK +RG++       I   +N+ R C G
Sbjct: 221 EIVDKNRRGEIFYYMHQQIIARFNIERLCNG 251


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.137    0.431 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,494
Number of Sequences: 317
Number of extensions: 1510
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 153
length of database: 114,650
effective HSP length: 52
effective length of query: 101
effective length of database: 98,166
effective search space:  9914766
effective search space used:  9914766
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.4 bits)
S2: 40 (20.2 bits)