GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000974-TA|BGIBMGA000974-PA|IPR001245|Tyrosine protein
kinase, IPR008266|Tyrosine protein kinase, active site,
IPR000719|Protein kinase, IPR011009|Protein kinase-like
         (153 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.   133   7e-34
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    55   3e-10
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    55   3e-10
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    52   3e-09
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    44   9e-07
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                38   3e-05
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    30   0.009

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score =  133 bits (322), Expect = 7e-34
 Identities = 63/152 (41%), Positives = 90/152 (59%), Gaps = 4/152 (2%)

Query: 1   MAYLERHNYIHRDLAARNCLVGDENVVKVADFGLARYV---LDDQYTSSGGTKFPIKWAP 57
           M YL   NY+HRDLAARN LV    V K+ADFGL+R +    +  YT+ GG K P++W  
Sbjct: 748 MQYLAEMNYVHRDLAARNVLVNAALVCKIADFGLSREIESATEGAYTTRGG-KIPVRWTA 806

Query: 58  PEVLNFTRFSSKSDVWAFGVLMWEVFTCGKVPYGRLTNSEVVDKVQRGQVLEKPKGCINE 117
           PE + F +F+S SDVW+ G++ WEV + G+ PY   +N +V+  +++G  L  P  C   
Sbjct: 807 PEAIAFRKFTSASDVWSMGIVCWEVMSYGERPYWNWSNQDVIKSIEKGYRLPAPMDCPEA 866

Query: 118 IYNVMRACWGHTPEERPSFRVLKEQLAVISQS 149
           IY +M  CW      RP+F  L + L  + +S
Sbjct: 867 IYQLMLDCWQKERTHRPTFANLTQTLDKLIRS 898


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 55.2 bits (127), Expect = 3e-10
 Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 18/157 (11%)

Query: 3   YLERHNYIHRDLAARNCLVGDENVVKVADFGLARYVLDDQYTSSGGTKFPIKWAPPEVLN 62
           YL     +HRD+  +N L+  EN  K+ DFG   + + +          P+  A PE+L+
Sbjct: 712 YLHSQGLVHRDVKLKNVLLDIENRAKLTDFG---FCITEVMMLGSIVGTPVHMA-PELLS 767

Query: 63  FTRFSSKSDVWAFGVLMWEVFTCG---KVPY--GRLTNSEVV-DKVQRGQVL-----EKP 111
              + S  DV+AFG+L W  + C    ++PY   +  N E++   V++  ++     E+ 
Sbjct: 768 -GHYDSSVDVYAFGILFW--YLCAGHVRLPYTFEQFHNKELLWTSVKKALMIVGIRPERL 824

Query: 112 KGCINEIYNVMRACWGHTPEERPSFRVLKEQLAVISQ 148
               +E + +M  CW   P +RP    +   L  I Q
Sbjct: 825 PSFDDECWRLMEQCWSGEPSKRPLLGAIVPVLESIQQ 861


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 55.2 bits (127), Expect = 3e-10
 Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 18/157 (11%)

Query: 3   YLERHNYIHRDLAARNCLVGDENVVKVADFGLARYVLDDQYTSSGGTKFPIKWAPPEVLN 62
           YL     +HRD+  +N L+  EN  K+ DFG   + + +          P+  A PE+L+
Sbjct: 750 YLHSQGLVHRDVKLKNVLLDIENRAKLTDFG---FCITEVMMLGSIVGTPVHMA-PELLS 805

Query: 63  FTRFSSKSDVWAFGVLMWEVFTCG---KVPY--GRLTNSEVV-DKVQRGQVL-----EKP 111
              + S  DV+AFG+L W  + C    ++PY   +  N E++   V++  ++     E+ 
Sbjct: 806 -GHYDSSVDVYAFGILFW--YLCAGHVRLPYTFEQFHNKELLWTSVKKALMIVGIRPERL 862

Query: 112 KGCINEIYNVMRACWGHTPEERPSFRVLKEQLAVISQ 148
               +E + +M  CW   P +RP    +   L  I Q
Sbjct: 863 PSFDDECWRLMEQCWSGEPSKRPLLGAIVPVLESIQQ 899


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 51.6 bits (118), Expect = 3e-09
 Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 6/137 (4%)

Query: 3   YLERHNYIHRDLAARNCLVGDENVVKVADFGLARYVLDDQYT-SSGGTKFPIKWAPPEVL 61
           YL   N I+RDL   N L+  +  VK+ DFG A+ +   + T +  GT    ++  PEV+
Sbjct: 481 YLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFAKRLDHGRKTWTFCGTP---EYVAPEVI 537

Query: 62  NFTRFSSKSDVWAFGVLMWEVFTCGKVPYGRLTNSEVVDKVQRG-QVLEKPKGCINEIYN 120
                   +D W+ GVLM+E+ T G  P+      +  + + +G   +E P+        
Sbjct: 538 LNKGHDISADYWSLGVLMFELLT-GTPPFTGGDPMKTYNIILKGIDAIEFPRSITRNATA 596

Query: 121 VMRACWGHTPEERPSFR 137
           +++      P ER  ++
Sbjct: 597 LIKKLCRDNPAERLGYQ 613


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 43.6 bits (98), Expect = 9e-07
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 6/88 (6%)

Query: 7   HN-YIHRDLAARNCLVGDEN---VVKVADFGLARYVLDDQYTSSGGTKFPIKWAPPEVLN 62
           HN  +HRDL   N L+  +     VK+ADFGLA  V  +     G    P  +  PEVL 
Sbjct: 27  HNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFGFAGTP-GYLSPEVLK 85

Query: 63  FTRFSSKSDVWAFGVLMWEVFTCGKVPY 90
              +    D+WA GV+++ +   G  P+
Sbjct: 86  KEPYGKPVDIWACGVILY-ILLVGYPPF 112


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 38.3 bits (85), Expect = 3e-05
 Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 14/133 (10%)

Query: 10  IHRDLAARNCLVGDENVVKVADFGLARYV-LDDQYTSSGGTKFPIKWAPPEVLNFTRFSS 68
           +H D+  +N L+      K+ DFG +  +   ++     GT     +  PEV+   R + 
Sbjct: 177 VHADVKPKNILMSKNGQPKLTDFGSSVLIGAPNEIDKFYGTP---GYTAPEVIKQNRPTP 233

Query: 69  KSDVWAFGVLMWEVFTCGKVPYGRLTNSEVVDKVQRG------QVLEKPKGCINEIYNVM 122
            +D+++ G++ W++    K+P+  L +  ++    +G       + ++ KG    +Y  M
Sbjct: 234 AADIYSLGIVAWQML-FRKLPFAGLHSHTIIYLSAKGHRPIDDNIDDEFKGTYKTLYKQM 292

Query: 123 RACWGHTPEERPS 135
              W     ERP+
Sbjct: 293 ---WSQNITERPT 302


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 30.3 bits (65), Expect = 0.009
 Identities = 11/34 (32%), Positives = 20/34 (58%)

Query: 3   YLERHNYIHRDLAARNCLVGDENVVKVADFGLAR 36
           +L     ++RDL   N L+  +  +K+ADFG+ +
Sbjct: 100 FLHGRGIVYRDLKLDNVLLDQDGHIKIADFGMCK 133


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.137    0.431 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,262
Number of Sequences: 429
Number of extensions: 1712
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 153
length of database: 140,377
effective HSP length: 53
effective length of query: 100
effective length of database: 117,640
effective search space: 11764000
effective search space used: 11764000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.4 bits)
S2: 40 (20.2 bits)