GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000973-TA|BGIBMGA000973-PA|IPR000719|Protein kinase,
IPR000980|SH2 motif, IPR001245|Tyrosine protein kinase
         (159 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    36   2e-04
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    26   0.17 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   0.93 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   0.93 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   5.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   8.7  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 35.9 bits (79), Expect = 2e-04
 Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 6/77 (7%)

Query: 82  DKWEIDPSELVLMEVLGAGQFXXXXXXXXXXXID----TAVKMMKEGTMSED--DFIDEA 135
           D+WE+ P +L    V+G G F            D     AVKM+KE   SE+   F  E 
Sbjct: 442 DQWELGPLKLSFQGVIGEGAFGIVRRAFLDLKEDNKTQVAVKMLKESPTSEEIRQFTQEI 501

Query: 136 KVMTSVYYLSIHINKIG 152
            +M SV      ++ IG
Sbjct: 502 NIMKSVRQHPYIVSLIG 518


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.8 bits (54), Expect = 0.17
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 18  NHQQTKHYHIKQNSRGEFYLSDKHCCASIPELINYHKHNSGG--LCSRLKATPCDRPAPP 75
           + QQ+ HY  ++ S  E     + C + +  L    K    G  L S  ++TP  R   P
Sbjct: 793 HQQQSHHYGRRERSGSESSSISERCSSRVESLTPERKMEPPGVPLNSTPRSTPDKREKSP 852

Query: 76  TA 77
           T+
Sbjct: 853 TS 854


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 0.93
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 2   SRQRAESLLKREDKEGNHQQTKHYHIKQNSRGEFYLS 38
           + Q  + L K ED+  NH     Y+ + N   + Y S
Sbjct: 328 NEQLRKYLCKNEDETKNHYSKNTYNEQGNKLADLYKS 364


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 0.93
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 2   SRQRAESLLKREDKEGNHQQTKHYHIKQNSRGEFYLS 38
           + Q  + L K ED+  NH     Y+ + N   + Y S
Sbjct: 220 NEQLRKYLCKNEDETKNHYSKNTYNEQGNKLADLYKS 256


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 7/22 (31%), Positives = 14/22 (63%)

Query: 137 VMTSVYYLSIHINKIGVSVYIL 158
           V+ S+Y  S H N+I + + ++
Sbjct: 47  VVVSIYSKSFHRNEIHIKIVLM 68


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 10/28 (35%), Positives = 13/28 (46%)

Query: 43   CASIPELINYHKHNSGGLCSRLKATPCD 70
            C S  E  N   + SG L  ++ A  CD
Sbjct: 1379 CYSTIEEKNLQVNESGKLIHKIDAQDCD 1406


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.133    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,345
Number of Sequences: 317
Number of extensions: 1347
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 159
length of database: 114,650
effective HSP length: 52
effective length of query: 107
effective length of database: 98,166
effective search space: 10503762
effective search space used: 10503762
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
S2: 40 (20.2 bits)