Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000973-TA|BGIBMGA000973-PA|IPR000719|Protein kinase,
IPR000980|SH2 motif, IPR001245|Tyrosine protein kinase
(159 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0230 - 28540114-28540323,28540414-28540548,28540779-285409... 33 0.14
01_06_0029 + 25751750-25752077,25753501-25753622,25754344-257545... 32 0.25
01_01_0104 + 780442-781273,782514-783424 31 0.58
07_03_0356 - 17142019-17142899,17145251-17145290,17145381-171455... 30 0.76
09_04_0295 - 16454862-16455035,16455122-16455264,16455393-164559... 30 1.0
09_06_0320 - 22297579-22297760,22298433-22299358,22299422-222997... 29 2.3
03_05_0896 - 28592658-28593331,28594069-28595455 29 2.3
02_04_0060 - 19345316-19345453,19345718-19345849,19345937-193460... 29 2.3
07_03_0943 - 22778877-22780970,22781376-22781480,22781481-227820... 28 3.1
01_01_0098 + 744582-745380,746107-746130,746500-747569 28 3.1
01_01_0095 + 733307-734060,734779-734802,735029-736098 28 4.1
09_03_0127 + 12573429-12574857,12575269-12575903 27 5.4
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 27 7.1
02_05_1315 + 35675285-35676688,35676816-35677255,35677341-35678784 27 7.1
01_01_0091 - 719842-720902,721042-721071,721521-722226 27 7.1
12_02_0976 + 24995576-24996904,24997011-24997157,24997428-24997781 27 9.4
12_01_0496 + 3939731-3939758,3940459-3942773 27 9.4
06_03_0953 - 26277946-26278800,26280177-26280676,26280735-26280849 27 9.4
01_01_0101 - 766382-767487,767599-767756,767900-768615 27 9.4
>05_07_0230 -
28540114-28540323,28540414-28540548,28540779-28540953,
28541104-28541300,28541824-28541945,28542887-28543193
Length = 381
Score = 32.7 bits (71), Expect = 0.14
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 15/112 (13%)
Query: 33 GEFYLSDKHCCASIPELINYHKHNSGGLCSRLKATPCDRPA--PPTAGLSH--------- 81
G F +D+ S+ E + H + + R + D+ PP +H
Sbjct: 8 GGFVRADQIDLKSLDEQLERHLSRAWTMEKRKEEAAADQRGSKPPALAAAHYSQNRRQRR 67
Query: 82 DKWEIDPSELVLMEVLGAGQFXXXXXXXXXXXIDTAVKMM---KEGTMSEDD 130
++WEIDP++LV+ V+ G F D AVK++ ++G SE D
Sbjct: 68 EEWEIDPAKLVVRGVIARGTFGTVHRGVYDGH-DVAVKLLDWGEDGHRSEQD 118
>01_06_0029 +
25751750-25752077,25753501-25753622,25754344-25754540,
25754641-25754815,25755126-25755260,25755374-25755583
Length = 388
Score = 31.9 bits (69), Expect = 0.25
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 72 PAPPTAGLSHDKWEIDPSELVLMEVLGAGQFXXXXXXXXXXXIDTAVKMMKEG 124
P P + WEIDP++LV+ V+ G F D AVKM+ G
Sbjct: 65 PQAPHHQRRREDWEIDPAKLVIRGVIARGTFGTVHRGVYDGQ-DVAVKMLDWG 116
>01_01_0104 + 780442-781273,782514-783424
Length = 580
Score = 30.7 bits (66), Expect = 0.58
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 95 EVLGAGQFXXXXXXXXXXXIDTAVKMMKEGTMSEDDFIDEAKVMTSVYYLSI 146
E LG G F + AVKM++ T + ++FI+E + +++++I
Sbjct: 341 EQLGQGGFGSVYKGRLPNGVPVAVKMIEHSTGNGEEFINEVATIGQIHHINI 392
>07_03_0356 -
17142019-17142899,17145251-17145290,17145381-17145512,
17145762-17145815,17145913-17145993,17146860-17146955,
17147439-17147611,17147750-17147823,17148515-17148622,
17148693-17148868,17149305-17149352,17150665-17150775,
17152172-17152226,17153434-17153534,17154176-17154290,
17155505-17155698
Length = 812
Score = 30.3 bits (65), Expect = 0.76
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 82 DKWEIDPSELVLMEVLGAGQFXXXXXXXXXXXIDTAVKMMKEGTMSED---DFIDEAKVM 138
D WE+DP L L +G F D A+K++K +S D +F E +M
Sbjct: 244 DVWEVDPRLLKFERKLASGSFGDLYHGTYCSQ-DVAIKVLKPERVSVDMLREFAQEVYIM 302
Query: 139 TSVYYLSI 146
V + ++
Sbjct: 303 KKVRHKNV 310
>09_04_0295 -
16454862-16455035,16455122-16455264,16455393-16455939,
16456006-16456332
Length = 396
Score = 29.9 bits (64), Expect = 1.0
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 65 KATPCDRPAPPTAGLS-HDKWEIDPSELVLMEVLGAGQFXXXXXXXXXXXIDTAVKMMK 122
+A PCD T L+ W + P E+ L E++G G +D AVK M+
Sbjct: 83 EAPPCDPYFAATRDLAVQHGWSVAPDEIELHEMIGRGS-TADVYRATWRGLDVAVKWMR 140
>09_06_0320 -
22297579-22297760,22298433-22299358,22299422-22299747,
22300591-22300660,22301632-22301726,22301917-22302048,
22302154-22302222,22302953-22303051,22303169-22303253,
22303353-22303453,22303660-22303728,22303861-22303901,
22304085-22304303,22304444-22304470,22304562-22304660,
22304898-22305106,22305382-22305485,22305753-22305894,
22305991-22306289,22306508-22306903
Length = 1229
Score = 28.7 bits (61), Expect = 2.3
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 79 LSHDKWEIDPSELVLMEVLGAGQFXXXXXXXXXXXIDTAVKMMKEGTMSED---DFIDEA 135
L+ D I +EL+L E +GAG F D AVK++ E D +F+ E
Sbjct: 478 LAVDDLIIPWNELILKEKIGAGSFGTVHRADWNGS-DVAVKILMEQDFHPDRFREFMREV 536
Query: 136 KVMTSVYYLSI 146
+M S+ + +I
Sbjct: 537 AIMKSLRHPNI 547
>03_05_0896 - 28592658-28593331,28594069-28595455
Length = 686
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 95 EVLGAGQFXXXXXXXXXXXIDTAVKMMKEGTMSEDDFID 133
EVLG G F AVK +K+ T++E +F D
Sbjct: 381 EVLGKGAFGTTYKAVLESGATVAVKRLKDVTLTEPEFRD 419
>02_04_0060 -
19345316-19345453,19345718-19345849,19345937-19346005,
19346453-19346551,19346702-19346786,19346890-19346990,
19347294-19347362,19347635-19347675,19348343-19348458,
19348546-19348702,19349266-19349474,19349811-19349914,
19350234-19350381,19350463-19350761,19350844-19351377
Length = 766
Score = 28.7 bits (61), Expect = 2.3
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 89 SELVLMEVLGAGQFXXXXXXXXXXXIDTAVKMMKEGTMSED---DFIDEAKVMTSVYYLS 145
SELVL E +GAG F D AVK++ E + +F+ E +M S+ + +
Sbjct: 512 SELVLKEKIGAGSFGTVHRADWNGS-DVAVKILMEQDFHPERLKEFLREVAIMKSLRHPN 570
Query: 146 I 146
I
Sbjct: 571 I 571
>07_03_0943 -
22778877-22780970,22781376-22781480,22781481-22782059,
22782149-22782187,22782340-22782372
Length = 949
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 6 AESLLKREDKEGNHQQTKHYHIKQNSRGEFYLSDKHC 42
++S + D E + Q +H + QN G Y+++K C
Sbjct: 507 SDSSEEHSDSEDSSQSYEHINTNQNKTGAKYVNEKKC 543
>01_01_0098 + 744582-745380,746107-746130,746500-747569
Length = 630
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 95 EVLGAGQFXXXXXXXXXXXIDTAVKMMKEGTMSEDDFIDEAKVMTSVYYLSI 146
E +G G F + AVKM++ T +DFI E + +++ +I
Sbjct: 337 EKVGQGGFGTVYKGKLLNGVPVAVKMLENPTGDGEDFITEVATIGRIHHANI 388
>01_01_0095 + 733307-734060,734779-734802,735029-736098
Length = 615
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 95 EVLGAGQFXXXXXXXXXXXIDTAVKMMKEGTMSEDDFIDEAKVMTSVYYLSI 146
E +G G F + AVKM++ T ++FI+E + ++++ +I
Sbjct: 323 EKVGQGGFGTVYKGKLPNGVPVAVKMLENPTGDGEEFINEVATIGTIHHTNI 374
>09_03_0127 + 12573429-12574857,12575269-12575903
Length = 687
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 56 NSGGLCSRLKATPCDRPAPPTAGLSHDK 83
NS GLC R PC P PP++G + K
Sbjct: 239 NSDGLCGRPDFPPC--PPPPSSGENDGK 264
>03_02_0234 +
6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 2 SRQRAESLLKREDKEGNHQQTKHYHIKQNSRGEFY-LSDKHCCASIPELINY 52
SR+ ++SLLK+E E + + +++ N E Y L D + P+ NY
Sbjct: 254 SRKGSDSLLKQEPDEDEEMKARCHYLAANVDDEIYHLDDDVYVKAGPDEENY 305
>02_05_1315 +
35675285-35676688,35676816-35677255,35677341-35678784
Length = 1095
Score = 27.1 bits (57), Expect = 7.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 70 DRPAPPTAGLSHDKWE 85
DRP PP A LS +WE
Sbjct: 2 DRPPPPPASLSPQEWE 17
>01_01_0091 - 719842-720902,721042-721071,721521-722226
Length = 598
Score = 27.1 bits (57), Expect = 7.1
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 97 LGAGQFXXXXXXXXXXXIDTAVKMMKEGTMSEDDFIDEAKVMTSVYYLSI 146
LG G F + AVKM++ ++FI+E + ++++++
Sbjct: 311 LGTGGFGSVYKGELSKGVPVAVKMLENSKGEGEEFINEVATIGRIHHVNV 360
>12_02_0976 +
24995576-24996904,24997011-24997157,24997428-24997781
Length = 609
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 62 SRLKATPCDRPAPPTAGLSHDKWEIDPSELV 92
+R ATP APP + H +W P ++V
Sbjct: 23 TRTHATPAAALAPPVGDIPHAQWRGLPDDVV 53
>12_01_0496 + 3939731-3939758,3940459-3942773
Length = 780
Score = 26.6 bits (56), Expect = 9.4
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 97 LGAGQFXXXXXXXXXXXIDTAVKMMKEGTMSEDDFIDEAKVMTSVYYLSIHINKIGV 153
LG G++ A+K +K+ E +F E V+ S+Y++++ + +GV
Sbjct: 505 LGRGRYGSVYKGILDDNRIVAIKKLKDVKQGEAEFQTEVSVIGSIYHMNL-VRVMGV 560
>06_03_0953 - 26277946-26278800,26280177-26280676,26280735-26280849
Length = 489
Score = 26.6 bits (56), Expect = 9.4
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 76 TAGLSHDKWEIDPSELVLMEVLGAGQFXXXXXXXXXXXIDTAVKMMKEGTMSEDDFIDE 134
+AGLS ++ E E+ + G + I+T V++M+EG D DE
Sbjct: 404 SAGLSTEEDETCHYEIPVKNSKNEGTYLATEVDQSDSEIETPVEIMREGLNMATDATDE 462
>01_01_0101 - 766382-767487,767599-767756,767900-768615
Length = 659
Score = 26.6 bits (56), Expect = 9.4
Identities = 10/52 (19%), Positives = 26/52 (50%)
Query: 95 EVLGAGQFXXXXXXXXXXXIDTAVKMMKEGTMSEDDFIDEAKVMTSVYYLSI 146
E LG G + ++ AVK+++ + ++FI E + ++++++
Sbjct: 350 EKLGQGGYGSVYKGVLPGYVNVAVKVLENANCNGEEFISEVSTIGRIHHVNV 401
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.133 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,571,346
Number of Sequences: 37544
Number of extensions: 181980
Number of successful extensions: 402
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 389
Number of HSP's gapped (non-prelim): 20
length of query: 159
length of database: 14,793,348
effective HSP length: 76
effective length of query: 83
effective length of database: 11,940,004
effective search space: 991020332
effective search space used: 991020332
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
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