Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000973-TA|BGIBMGA000973-PA|IPR000719|Protein kinase,
IPR000980|SH2 motif, IPR001245|Tyrosine protein kinase
(159 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g50000.1 68418.m06191 protein kinase, putative similar to pro... 33 0.090
At3g01490.1 68416.m00073 protein kinase, putative similar to ATM... 32 0.21
At1g66910.1 68414.m07604 protein kinase, putative similar to rec... 31 0.27
At5g16590.1 68418.m01942 leucine-rich repeat transmembrane prote... 29 1.1
At1g66980.1 68414.m07616 protein kinase family protein / glycero... 29 1.1
At5g03730.2 68418.m00334 serine/threonine protein kinase (CTR1) ... 29 1.5
At5g03730.1 68418.m00333 serine/threonine protein kinase (CTR1) ... 29 1.5
At2g31010.1 68415.m03781 protein kinase family protein contains ... 29 1.9
At3g54520.1 68416.m06033 hypothetical protein 28 2.6
At3g17840.1 68416.m02274 leucine-rich repeat transmembrane prote... 28 3.4
At5g39030.1 68418.m04723 protein kinase family protein contains ... 27 4.5
At5g38240.1 68418.m04610 serine/threonine protein kinase, putati... 27 5.9
At3g58640.2 68416.m06536 protein kinase family protein contains ... 27 5.9
At3g58640.1 68416.m06535 protein kinase family protein contains ... 27 5.9
At3g14050.1 68416.m01773 RelA/SpoT protein, putative (RSH2) near... 27 5.9
At1g70250.1 68414.m08082 receptor serine/threonine kinase, putat... 27 5.9
>At5g50000.1 68418.m06191 protein kinase, putative similar to
protein kinase ATMRK1 [Arabidopsis thaliana]
gi|2351097|dbj|BAA22079
Length = 385
Score = 33.1 bits (72), Expect = 0.090
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 83 KWEIDPSELVLMEVLGAGQFXXXXXXXXXXXIDTAVKMM---KEGTMSEDDFI 132
+WEIDPS+L++ VL G F D AVK++ +EG SE + +
Sbjct: 74 EWEIDPSKLIIKTVLARGTFGTVHRGIYDGQ-DVAVKLLDWGEEGHRSEAEIV 125
>At3g01490.1 68416.m00073 protein kinase, putative similar to ATMRK1
[Arabidopsis thaliana] gi|2351097|dbj|BAA22079
Length = 411
Score = 31.9 bits (69), Expect = 0.21
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 80 SHDKWEIDPSELVLMEVLGAGQFXXXXXXXXXXXIDTAVKMMKEG 124
S +WEIDPS+L++ V+ G F D AVK++ G
Sbjct: 97 SRREWEIDPSKLIIKSVIARGTFGTVHRGIYDGQ-DVAVKLLDWG 140
>At1g66910.1 68414.m07604 protein kinase, putative similar to
receptor serine/threonine kinase PR5K
gi|1235680|gb|AAC49208
Length = 666
Score = 31.5 bits (68), Expect = 0.27
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 95 EVLGAGQFXXXXXXXXXXXIDTAVKMMKEGTMSEDDFIDEAKVMTSVYYLSI 146
EV+G G F AVK++KE + +DFI+E M+ +++I
Sbjct: 352 EVIGKGGFGTVYRGTLYDGRSVAVKVLKESQGNGEDFINEVASMSQTSHVNI 403
>At5g16590.1 68418.m01942 leucine-rich repeat transmembrane protein
kinase, putative
Length = 625
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/67 (22%), Positives = 33/67 (49%)
Query: 80 SHDKWEIDPSELVLMEVLGAGQFXXXXXXXXXXXIDTAVKMMKEGTMSEDDFIDEAKVMT 139
S ++++D EVLG G F + AVK +++ + E +F ++ +V+
Sbjct: 332 SFGEFDLDGLLKASAEVLGKGTFGSSYKASFDHGLVVAVKRLRDVVVPEKEFREKLQVLG 391
Query: 140 SVYYLSI 146
S+ + ++
Sbjct: 392 SISHANL 398
>At1g66980.1 68414.m07616 protein kinase family protein /
glycerophosphoryl diester phosphodiesterase family
protein similar to leaf rust resistance kinase Lr10
GI:1680685 from [Triticum aestivum]; contains Pfam
profiles PF03009: Glycerophosphoryl diester
phosphodiesterase family, PF00069: Protein kinase domain
Length = 1109
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 95 EVLGAGQFXXXXXXXXXXXIDTAVKMMKEGTMSEDDFIDEAKVMTSVYYLSI 146
EV+G G F AVK++K+ + +DFI+E M+ +L+I
Sbjct: 800 EVVGRGGFGIVYKGTLSDGRVVAVKVLKDTKGNGEDFINEVATMSRTSHLNI 851
>At5g03730.2 68418.m00334 serine/threonine protein kinase (CTR1)
identical to serine/threonine-protein kinase CTR1
[Arabidopsis thaliana] SWISS-PROT:Q05609
Length = 821
Score = 29.1 bits (62), Expect = 1.5
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 64 LKATPCDRPAPPTA----GLSHDKWEIDPSELVLMEVLGAGQFXXXXXXXXXXXIDTAVK 119
+ A P +P P A GL D +I +L + E +GAG F D AVK
Sbjct: 520 MNAPPISQPVPNRANRELGLDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGS-DVAVK 578
Query: 120 MMKEGTMSED---DFIDEAKVMTSVYYLSI 146
++ E + +F+ E +M + + +I
Sbjct: 579 ILMEQDFHAERVNEFLREVAIMKRLRHPNI 608
>At5g03730.1 68418.m00333 serine/threonine protein kinase (CTR1)
identical to serine/threonine-protein kinase CTR1
[Arabidopsis thaliana] SWISS-PROT:Q05609
Length = 821
Score = 29.1 bits (62), Expect = 1.5
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 64 LKATPCDRPAPPTA----GLSHDKWEIDPSELVLMEVLGAGQFXXXXXXXXXXXIDTAVK 119
+ A P +P P A GL D +I +L + E +GAG F D AVK
Sbjct: 520 MNAPPISQPVPNRANRELGLDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGS-DVAVK 578
Query: 120 MMKEGTMSED---DFIDEAKVMTSVYYLSI 146
++ E + +F+ E +M + + +I
Sbjct: 579 ILMEQDFHAERVNEFLREVAIMKRLRHPNI 608
>At2g31010.1 68415.m03781 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 775
Score = 28.7 bits (61), Expect = 1.9
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 79 LSHDKWEIDPSELVLMEVLGAGQFXXXXXXXXXXXIDTAVKMMKEGTMSE---DDFIDEA 135
L + +W+ID SEL + +G G F D A+K+ E ++ +DF +E
Sbjct: 507 LPYQEWDIDFSELTVGTRVGIG-FFGEVFRGVWNGTDVAIKLFLEQDLTAENMEDFCNEI 565
Query: 136 KVMTSVYYLSI 146
+++ V + ++
Sbjct: 566 SILSRVRHPNV 576
>At3g54520.1 68416.m06033 hypothetical protein
Length = 250
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 1 MSRQRAESLLKREDKEGNHQQTKHYHIKQNSRGEFYLSDKH 41
MS +AE LK+ +++ H + I+ N R FY+ KH
Sbjct: 46 MSVSKAEKRLKKLERDYQHTYENYNEIRSN-RYRFYIEAKH 85
>At3g17840.1 68416.m02274 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor kinase GB:AAA33715
from [Petunia integrifolia]
Length = 647
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 95 EVLGAGQFXXXXXXXXXXXIDTAVKMMKEGTMSEDDFIDEAKVM 138
EVLG G F AVK +K+ TM++ +F ++ +V+
Sbjct: 369 EVLGKGTFGTAYKAVLDAVTLVAVKRLKDVTMADREFKEKIEVV 412
>At5g39030.1 68418.m04723 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 806
Score = 27.5 bits (58), Expect = 4.5
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 96 VLGAGQFXXXXXXXXXXXIDTAVKMMKEGTMSEDDFIDEAKVMTSVYYLSI 146
++G G F AVK++K+ S +DFI+E M+ +++I
Sbjct: 503 IIGKGGFGTVYGGNLSNGRKVAVKVLKDLKGSAEDFINEVASMSQTSHVNI 553
>At5g38240.1 68418.m04610 serine/threonine protein kinase, putative
similar to receptor serine/threonine kinase PR55K
gi|1235680|gb|AAC49208; contains protein kinase domain,
Pfam:PF00069; contains serine/threonine protein kinase
domain, INTERPRO:IPR002290
Length = 588
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 95 EVLGAGQFXXXXXXXXXXXIDTAVKMMKEGTMSEDDFIDEAKVMTSVYYLSI 146
EV+G G F AVK++K+ + +DFI+E ++ +++I
Sbjct: 285 EVVGRGGFGTVYKGNLRDGRKVAVKILKDSNGNCEDFINEVASISQTSHVNI 336
>At3g58640.2 68416.m06536 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 809
Score = 27.1 bits (57), Expect = 5.9
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 79 LSHDKWEIDPSELVLMEVLGAGQFXXXXXXXXXXXIDTAVKMMKEGTMSE---DDFIDEA 135
L +++W ID SEL + +G G F D A+K+ E ++ +DF +E
Sbjct: 541 LPYEEWNIDFSELTVGTRVGIG-FFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEI 599
Query: 136 KVMTSVYYLSI 146
+++ + + ++
Sbjct: 600 SILSRLRHPNV 610
>At3g58640.1 68416.m06535 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 809
Score = 27.1 bits (57), Expect = 5.9
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 79 LSHDKWEIDPSELVLMEVLGAGQFXXXXXXXXXXXIDTAVKMMKEGTMSE---DDFIDEA 135
L +++W ID SEL + +G G F D A+K+ E ++ +DF +E
Sbjct: 541 LPYEEWNIDFSELTVGTRVGIG-FFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEI 599
Query: 136 KVMTSVYYLSI 146
+++ + + ++
Sbjct: 600 SILSRLRHPNV 610
>At3g14050.1 68416.m01773 RelA/SpoT protein, putative (RSH2) nearly
identical to RelA/SpoT homolog RSH2 [Arabidopsis
thaliana] GI:7141306; contains Pfam profiles PF01966: HD
domain, PF04607: Region found in RelA / SpoT proteins
Length = 709
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 125 TMSEDDFIDEAKVMTSVYYLSIHINKIGVSVYIL 158
TM ED F DEA + +++ L + K G+S ++L
Sbjct: 393 TMLEDSF-DEAMITSAIEKLEQALKKAGISYHVL 425
>At1g70250.1 68414.m08082 receptor serine/threonine kinase, putative
similar to to receptor serine/threonine kinase PR5K
gi|1235680|gb|AAC49208
Length = 799
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 115 DTAVKMMKEGTMSEDDFIDEAKVMTSVYYLSI 146
D AVK++KE +DFI+E M+ + +I
Sbjct: 484 DVAVKILKESNEDGEDFINEIASMSRTSHANI 515
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.133 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,654,222
Number of Sequences: 28952
Number of extensions: 140369
Number of successful extensions: 325
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 316
Number of HSP's gapped (non-prelim): 16
length of query: 159
length of database: 12,070,560
effective HSP length: 76
effective length of query: 83
effective length of database: 9,870,208
effective search space: 819227264
effective search space used: 819227264
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
- SilkBase 1999-2023 -