Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000972-TA|BGIBMGA000972-PA|IPR001452|Src homology-3
(72 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38378| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 52 7e-08
SB_48483| Best HMM Match : SH3_1 (HMM E-Value=7.1e-23) 46 3e-06
SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0) 45 1e-05
SB_48319| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-05
SB_33664| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 2e-04
SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0) 38 0.001
SB_33663| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.003
SB_8922| Best HMM Match : SH3_1 (HMM E-Value=0.19) 37 0.003
SB_33662| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.004
SB_14941| Best HMM Match : SH3_1 (HMM E-Value=1.1e-12) 35 0.008
SB_41947| Best HMM Match : SH3_1 (HMM E-Value=6.3e-24) 34 0.014
SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.019
SB_4655| Best HMM Match : Spectrin (HMM E-Value=0) 33 0.033
SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0) 33 0.044
SB_15896| Best HMM Match : SH3_1 (HMM E-Value=0.00055) 33 0.044
SB_50467| Best HMM Match : SH3_1 (HMM E-Value=1e-12) 32 0.058
SB_55426| Best HMM Match : SH3_1 (HMM E-Value=1.90002e-41) 32 0.077
SB_54055| Best HMM Match : SH3_1 (HMM E-Value=0.018) 32 0.077
SB_11165| Best HMM Match : SH3_1 (HMM E-Value=1.3e-08) 31 0.13
SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33) 31 0.18
SB_39120| Best HMM Match : SH3_1 (HMM E-Value=2e-20) 31 0.18
SB_52816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.18
SB_49450| Best HMM Match : SH3_1 (HMM E-Value=6.9e-17) 30 0.23
SB_38286| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.23
SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.23
SB_5212| Best HMM Match : SH3_1 (HMM E-Value=4.9e-20) 30 0.31
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.72
SB_10210| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 0.95
SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26) 28 1.3
SB_5826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.3
SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.2
SB_42044| Best HMM Match : ubiquitin (HMM E-Value=1.2e-06) 27 2.2
SB_23213| Best HMM Match : SH3_1 (HMM E-Value=9.2e-12) 27 2.9
SB_3027| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_50744| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_11360| Best HMM Match : PDZ (HMM E-Value=0) 26 3.8
SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.1
SB_40386| Best HMM Match : BAR (HMM E-Value=0) 26 5.1
SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42) 26 5.1
SB_51657| Best HMM Match : SH3_1 (HMM E-Value=2.69999e-40) 25 6.7
SB_8979| Best HMM Match : SH3_1 (HMM E-Value=3.6e-05) 25 8.8
>SB_38378| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 478
Score = 52.0 bits (119), Expect = 7e-08
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 15 KPKEKPR-TKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDENGY 66
KP E + +IVVA+Y F++ E GDLSL KG + VI+ S +HWW K+ G+
Sbjct: 6 KPFEGEKYEEIVVAMYEFQSTEPGDLSLIKGELFAVIEKSGEHWWLAKNIRGW 58
>SB_48483| Best HMM Match : SH3_1 (HMM E-Value=7.1e-23)
Length = 936
Score = 46.4 bits (105), Expect = 3e-06
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 25 VVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWK 59
VVALY F A E+G+L+ +KG EV+D D+WWK
Sbjct: 3 VVALYDFVAQEAGELNFKKGNHIEVLDKEDDNWWK 37
>SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 824
Score = 44.8 bits (101), Expect = 1e-05
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 18 EKPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVK-DENGYG 67
E I +ALY +KA E +LS++K + ++DDSQ WWKV+ D+N G
Sbjct: 99 EMSEESIAIALYDYKAHEKEELSIKKNDKLVIVDDSQT-WWKVRNDQNVEG 148
Score = 34.3 bits (75), Expect = 0.014
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 25 VVALYPFKAIESGDLSLEKGAEYEVI--DDSQDHWWKVKDENG 65
V+ LY F++ S +L+ EKG +VI D WW K ++G
Sbjct: 271 VITLYQFQSPNSEELNFEKGEVLDVIKQPDGDPDWWFAKKQDG 313
Score = 30.7 bits (66), Expect = 0.18
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 11 TPSAKPKEKPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWK 59
TP + + IV A + ++ I +L L KG V++ D WWK
Sbjct: 193 TPESVMTPQKTLCIVKAKFSYQPIHVDELQLTKGDLIHVLEKEGDGWWK 241
>SB_48319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 965
Score = 42.3 bits (95), Expect = 5e-05
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 11 TPSAKPKEKPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDENGYGDFL 70
TPS+ P ++ + LY F+A S +LS+++ E V+DDS+ WW V++ G F+
Sbjct: 326 TPSSTPGKRGIFRRTTVLYDFQARNSRELSVKQNEELVVLDDSR-QWWCVRNSEGAIGFI 384
>SB_33664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 40.3 bits (90), Expect = 2e-04
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 19 KPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVK----DENGY 66
K T I +ALY + A + DLS +KG +++D++ WW K D+ GY
Sbjct: 74 KGATNIFMALYDYDARTNEDLSFKKGERLQLLDNTDGDWWLAKSLSTDQEGY 125
>SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 704
Score = 37.9 bits (84), Expect = 0.001
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 11 TPSAKPKEKPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWW--KVKDENGYGD 68
+P ++KP + VAL + + +S ++G E EV+ WW K+ D++G+
Sbjct: 638 SPEYAKQDKPAKHVYVALASYHDEDDDAISFDEGDEMEVVQQDDSGWWLVKIADKSGWAP 697
Query: 69 FLFI 72
F+
Sbjct: 698 SNFL 701
Score = 30.3 bits (65), Expect = 0.23
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 39 LSLEKGAEYEVIDDSQDHWWKVKDENG 65
+S +G E+E ++DS WW V+ +G
Sbjct: 598 MSFSEGEEFEFLEDSHSGWWLVRTLSG 624
Score = 29.5 bits (63), Expect = 0.41
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 34 IESGDLSLEKGAEYEVIDDSQDHWWKVKDENGYG 67
I+SG L KGA EV+D + + WW K + G
Sbjct: 213 IQSG-LDFSKGASVEVLDKNPNGWWYGKIDGNEG 245
Score = 25.8 bits (54), Expect = 5.1
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 13 SAKPKEKPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVK 61
SA P ++ VA ++ G LS +G +++ D WW V+
Sbjct: 412 SAGPSAHGVEEVYVAKSDYEDKSDGVLSFREGDNLVLMEKRDDGWWFVR 460
>SB_33663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 36.7 bits (81), Expect = 0.003
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 15 KPKEKPRTKIVVALYPFKAIESGDLSLEKGAEYEV-IDDSQDHWWKVKDEN 64
+P P + +ALY + A DLS +KG EV DD + WW+ K +
Sbjct: 63 EPPPTPSRPLYLALYDYDARTQEDLSFKKGEVLEVNPDDLANDWWRAKSRD 113
>SB_8922| Best HMM Match : SH3_1 (HMM E-Value=0.19)
Length = 40
Score = 36.7 bits (81), Expect = 0.003
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 23 KIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKV 60
K +A + ++A E +L LEKG E++ + QD WW V
Sbjct: 2 KKYIATHEYRAQEEDELDLEKGTVVELLTEYQDGWWLV 39
>SB_33662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 36.3 bits (80), Expect = 0.004
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 23 KIVVALYPFKAIESGDLSLEKGAEYEVIDD-SQDHWWKVK 61
K+ VALY ++A DLS +KG + EV++D WW+ +
Sbjct: 62 KLFVALYDYEARTDEDLSFKKGEKLEVVNDLDGGDWWQAR 101
>SB_14941| Best HMM Match : SH3_1 (HMM E-Value=1.1e-12)
Length = 469
Score = 35.1 bits (77), Expect = 0.008
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 18 EKPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDEN 64
+ P I + + + ++SL++G EV++ S+D WW V+ +N
Sbjct: 186 DDPEHVIYYVIGEYNKDDDSEVSLKEGETVEVLEQSEDGWWLVRTQN 232
>SB_41947| Best HMM Match : SH3_1 (HMM E-Value=6.3e-24)
Length = 581
Score = 34.3 bits (75), Expect = 0.014
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 20 PRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDENGYGDFL 70
P K +V LY F+A D+S+ KG V++ D WW V G F+
Sbjct: 307 PHFKAMV-LYDFEACAEDDVSVTKGDVVNVLNRDDDDWWWVTTPRGGEGFV 356
>SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2509
Score = 33.9 bits (74), Expect = 0.019
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 11 TPSAKPKEKPRTKIVV-ALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDENG 65
TP + K K R K V A+ +K +++ ++E+G EY + D+++ H WKV G
Sbjct: 1038 TPMKQRKSKLRQKTSVKAVCSYKNMQN---TVEQGEEYTLFDNTEHHAWKVASSPG 1090
>SB_4655| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 934
Score = 33.1 bits (72), Expect = 0.033
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 25 VVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDENGYG 67
VVALY ++ + ++S++KG +++ + WWKV+ + G
Sbjct: 853 VVALYDYQEKTAREVSMKKGDILTLLNSTNKDWWKVETNDRQG 895
>SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 1034
Score = 32.7 bits (71), Expect = 0.044
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 27 ALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDENG 65
ALY F A+ SGDL L +G V+ D+W + + ++G
Sbjct: 361 ALYHFSALHSGDLELSEGDVITVLKIVDDNWLEGRLQSG 399
Score = 31.5 bits (68), Expect = 0.10
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 25 VVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDENGYGDF 69
V +LYPF A S +L+ ++G +V+ +HW+ + + G F
Sbjct: 66 VRSLYPFTATSSAELTAKEGDILKVLSHFDEHWYNCELNSKKGLF 110
Score = 29.5 bits (63), Expect = 0.41
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 27 ALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDENGYGDF 69
ALY F+A +LS GAE V D + W++ E G F
Sbjct: 209 ALYGFEARNKDELSFPMGAEIVVTKDVDNDWYEGTFEGDTGLF 251
Score = 29.1 bits (62), Expect = 0.54
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 23 KIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDENG 65
+ VVA+ + A G++SL+KG +V+++ ++W + D NG
Sbjct: 126 RYVVAIQSYSAQRPGEISLKKGDFVKVLEEIGNNWLR-GDING 167
>SB_15896| Best HMM Match : SH3_1 (HMM E-Value=0.00055)
Length = 300
Score = 32.7 bits (71), Expect = 0.044
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 26 VALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVK 61
VALY + GD+ L G E+ + D WW+ K
Sbjct: 70 VALYDYAGENDGDMPLRAGDRIEIKSTADDSWWEWK 105
>SB_50467| Best HMM Match : SH3_1 (HMM E-Value=1e-12)
Length = 132
Score = 32.3 bits (70), Expect = 0.058
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 32 KAIESGDLSLEKGAEYEVIDDSQDHWWKVKDENG 65
K + DL +KG VI +D+WWK +D G
Sbjct: 46 KEHDDEDLPFKKGDILTVISKEEDNWWKARDSAG 79
>SB_55426| Best HMM Match : SH3_1 (HMM E-Value=1.90002e-41)
Length = 689
Score = 31.9 bits (69), Expect = 0.077
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 12 PSAKPKEKPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWK 59
P A P+ KP VV+ P+ AI + LSL G V WW+
Sbjct: 299 PVAAPRSKPEIATVVS--PYTAIAADQLSLAPGQLIRVTRKDPSGWWE 344
Score = 29.5 bits (63), Expect = 0.41
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 20 PRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWW 58
P+ +ALYP++ + LS K + I + QD WW
Sbjct: 133 PQGLTAIALYPYRGKKDDMLSFNKN-DIIAIKEQQDTWW 170
>SB_54055| Best HMM Match : SH3_1 (HMM E-Value=0.018)
Length = 103
Score = 31.9 bits (69), Expect = 0.077
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 26 VALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWK 59
VALY + GD+ L G E+ + D WW+
Sbjct: 70 VALYDYAGENDGDMPLRAGDRIEIKSTADDSWWE 103
>SB_11165| Best HMM Match : SH3_1 (HMM E-Value=1.3e-08)
Length = 135
Score = 31.1 bits (67), Expect = 0.13
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 25 VVALYPFK--AIESGDLSLEKGAEYEVIDDSQDHWWKVKDENG 65
V ALYPF A + ++ + G + +++ S + WW+VK NG
Sbjct: 9 VEALYPFSYTAGDGRKIAFDTGERFALLNKSNNDWWQVK-RNG 50
>SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33)
Length = 665
Score = 30.7 bits (66), Expect = 0.18
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 28 LYPFKAIESGDLSLEKGAEYEVIDDSQDHWWK 59
L+ ++A + +LSL G E VI + +D WW+
Sbjct: 11 LFDYEAENADELSLVTGIEINVIREVEDGWWE 42
>SB_39120| Best HMM Match : SH3_1 (HMM E-Value=2e-20)
Length = 524
Score = 30.7 bits (66), Expect = 0.18
Identities = 11/45 (24%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 14 AKPKEKPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWW 58
+K +P+ +++V +YP++A + +L++ G V+ ++WW
Sbjct: 302 SKQAAQPKKQVLV-MYPYEANRADELTITPGDVITVLYQDNENWW 345
>SB_52816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1622
Score = 30.7 bits (66), Expect = 0.18
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 23 KIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDENGYG 67
++ VA+ + A + LS EKG + V+ WW V+ E G
Sbjct: 48 EVCVAIGDYTANDKSQLSFEKGQKLVVLSKETKDWWWVELEGSCG 92
>SB_49450| Best HMM Match : SH3_1 (HMM E-Value=6.9e-17)
Length = 288
Score = 30.3 bits (65), Expect = 0.23
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 23 KIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWK 59
++ ALY +K + +L L++G Y V++ +D W+K
Sbjct: 71 ELYTALYNYKPQKEDELELKQGECYYVLEKCKDGWFK 107
>SB_38286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 30.3 bits (65), Expect = 0.23
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 23 KIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWK 59
++ ALY +K + +L L++G Y V++ +D W+K
Sbjct: 71 ELYTALYNYKPQKEDELELKQGECYYVLEKCKDGWFK 107
>SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 30.3 bits (65), Expect = 0.23
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 11 TPSAKPKEKPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWW--KVKDENGY 66
T + +E + ALY + A S +LS +KG V D WW + D +G+
Sbjct: 706 TEESDSEEDFEPRDAAALYDYSARSSKELSFKKGDIIRVFKRFNDDWWDGTLGDSDGF 763
>SB_5212| Best HMM Match : SH3_1 (HMM E-Value=4.9e-20)
Length = 300
Score = 29.9 bits (64), Expect = 0.31
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 21 RTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWK 59
R + V+A++P+ A + +L+ KG+ + V+ WWK
Sbjct: 233 RLEQVLAMFPYTAQKGDELTFYKGSVFNVM-SKDGEWWK 270
>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6119
Score = 28.7 bits (61), Expect = 0.72
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 14 AKPKEKPR---TKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDE 63
++P ++P+ +K V++ F G+L + +G +V+DD+ W V E
Sbjct: 5312 SEPMDRPKVEESKRFVSVCNFTPRNPGELGIREGDVIDVLDDNDTETWLVASE 5364
Score = 25.8 bits (54), Expect = 5.1
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 14 AKPKEKPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVK 61
A+ +E K+ A F + E+G L+KG EV+D S+ + V+
Sbjct: 5241 ARIEEVLTLKLYTATSDFLSEETGKKFLQKGDHVEVLDTSRPEFLLVR 5288
>SB_10210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 793
Score = 28.3 bits (60), Expect = 0.95
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 24 IVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDENG 65
+ V LY F+A +LS+ + E E+++ + W K +++ G
Sbjct: 435 LCVVLYSFEATTEDELSITEHEELELLEIDGEGWCKGRNKAG 476
>SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26)
Length = 2157
Score = 27.9 bits (59), Expect = 1.3
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 26 VALYPFKAIESGDLSLEKGAEYEVID-DSQDHWWKVKDENGYG 67
VAL+ F A D++ KG V++ D D +W VK G
Sbjct: 1894 VALWDFNATAEDDITASKGDVVTVLNKDDPDWYWVVKRSGDEG 1936
>SB_5826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 27.9 bits (59), Expect = 1.3
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 14 AKPKEKPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDENGYGDFL 70
A+ K + LY F+ E GDL+L KG ++ ++W++ NG FL
Sbjct: 197 ARSKRRTTKPCARVLYDFEPREQGDLALCKGDFVYLLRQVDENWFE-GQVNGCQGFL 252
>SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 966
Score = 27.1 bits (57), Expect = 2.2
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 11 TPSAKPKEKPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDENG 65
T +A +K K+ + +P K + GD + YEV+ D + K+ DE G
Sbjct: 75 TATATEIKKSYRKLALKYHPDKNPDEGDRFKQISQAYEVLSDEKKR--KIYDEGG 127
>SB_42044| Best HMM Match : ubiquitin (HMM E-Value=1.2e-06)
Length = 1425
Score = 27.1 bits (57), Expect = 2.2
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 28 LYPFKAIESGDLSLEKGAEYEVID-DSQDHWW 58
LY F+A G+LS+ G + +V++ D D W
Sbjct: 189 LYEFQATNDGELSVTVGEDLQVLEMDLDDSGW 220
>SB_23213| Best HMM Match : SH3_1 (HMM E-Value=9.2e-12)
Length = 979
Score = 26.6 bits (56), Expect = 2.9
Identities = 9/45 (20%), Positives = 23/45 (51%)
Query: 17 KEKPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVK 61
++ + + AL + +E+G+++L +G + + WW V+
Sbjct: 916 QDSSKKALYKALAEYNPVEAGEIALVEGDTVSFVREGNAGWWLVE 960
>SB_3027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 26.6 bits (56), Expect = 2.9
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 26 VALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDENGY 66
+A++ F+ ++ L+KG V+ QD W++ GY
Sbjct: 9 IAIHEFQTTRDDEIDLQKGDVVLVVKKYQDGWFRGVRCRGY 49
>SB_50744| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 26.6 bits (56), Expect = 2.9
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 26 VALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKV 60
V + +K + DL+L G +VI ++ WW V
Sbjct: 139 VVITDYKKTQQKDLNLRAGNVVDVIQKNEHGWWFV 173
>SB_11360| Best HMM Match : PDZ (HMM E-Value=0)
Length = 625
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 34 IESGDLSLEKGAEYEVIDDSQDHWWKVKDENGYGD 68
+ S LS + G V + S D WW+ + N G+
Sbjct: 315 LPSQGLSFKYGDILHVTNASDDEWWQARKLNAVGE 349
>SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 25.8 bits (54), Expect = 5.1
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 27 ALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDENGYGDF 69
A+Y ++A +S +L++ G V + WW+ N G F
Sbjct: 567 AIYDYQATQSDELTIHPGDIITVTARLDNGWWQGDLNNQQGIF 609
>SB_40386| Best HMM Match : BAR (HMM E-Value=0)
Length = 369
Score = 25.8 bits (54), Expect = 5.1
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 12 PSAKPKEKPRTK-IVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDENGYGDF 69
P AK + + K A + +KA + G+LS +G + D W++ + +G F
Sbjct: 293 PLAKSSDSDKLKPSCKAKFDYKAKKEGELSFTEGQIITLSGKRDDEWYEGTLDGKFGIF 351
>SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42)
Length = 1712
Score = 25.8 bits (54), Expect = 5.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 39 LSLEKGAEYEVIDDSQDHWWK 59
LS E AEY+V+ D H WK
Sbjct: 1224 LSQEIPAEYDVVTDPPPHSWK 1244
>SB_51657| Best HMM Match : SH3_1 (HMM E-Value=2.69999e-40)
Length = 313
Score = 25.4 bits (53), Expect = 6.7
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Query: 11 TPSAKPKEKP------RTKI---VVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWW 58
TP A P E +TKI +AL+ +++ GDL+ + G E ++ W+
Sbjct: 12 TPKAHPSESSVVSSVQQTKIEPSAIALFDYESGADGDLTFQAGDEIALLQRVDKDWY 68
>SB_8979| Best HMM Match : SH3_1 (HMM E-Value=3.6e-05)
Length = 169
Score = 25.0 bits (52), Expect = 8.8
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 27 ALYPFKAIESGDLSLEKGAEYEVIDDSQDHWW 58
A+Y + +L LE+G E V++ D W+
Sbjct: 61 AMYGYSPQNEDELPLEEGEEVFVLEKCDDGWF 92
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.136 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,443,757
Number of Sequences: 59808
Number of extensions: 82980
Number of successful extensions: 176
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 126
Number of HSP's gapped (non-prelim): 54
length of query: 72
length of database: 16,821,457
effective HSP length: 50
effective length of query: 22
effective length of database: 13,831,057
effective search space: 304283254
effective search space used: 304283254
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 52 (25.0 bits)
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