Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000972-TA|BGIBMGA000972-PA|IPR001452|Src homology-3
(72 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 44 3e-06
SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces po... 39 9e-05
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 33 0.003
SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein Tea4|Schi... 32 0.011
SPAPJ696.02 |||actin cortical patch component Lsb4 |Schizosaccha... 32 0.011
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 31 0.019
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.025
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 30 0.032
SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual 30 0.032
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 30 0.032
SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyce... 29 0.057
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 0.075
SPCC24B10.13 |skb5||Shk1 kinase binding protein 5|Schizosaccharo... 27 0.30
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 27 0.30
SPBC418.01c |his4|SPBC887.20c|imidazoleglycerol-phosphate syntha... 27 0.40
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 27 0.40
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 26 0.53
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 26 0.70
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 25 0.92
SPBC1773.12 |||transcription factor |Schizosaccharomyces pombe|c... 23 4.9
SPAP27G11.05c |vps41||vacuolar protein sorting-associated protei... 23 4.9
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 23 4.9
SPBC4B4.02c |nca2||mitochondrial protein Nca2 |Schizosaccharomyc... 23 6.5
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 22 8.6
SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharo... 22 8.6
SPAC9.12c |atp12||F1-ATPase chaperone Atp12 |Schizosaccharomyces... 22 8.6
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 22 8.6
SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc... 22 8.6
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 43.6 bits (98), Expect = 3e-06
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 12 PSAKPKEKPRTKIVVALYPFKAIESGDLSLEKGAEYEVID--DSQDHWWKVKDENGYGDF 69
P+ P P + VVALY + A +GDLS G EV+ D+Q+ WW + G F
Sbjct: 399 PAPAPAAAPAAEHVVALYDYAAQAAGDLSFHAGDRIEVVSRTDNQNEWWIGRLNGAQGQF 458
>SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 38.7 bits (86), Expect = 9e-05
Identities = 19/45 (42%), Positives = 24/45 (53%)
Query: 25 VVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDENGYGDF 69
V ALY F A E G+LS +KG V++ WWK +N G F
Sbjct: 220 VRALYDFAATEQGELSFKKGDIILVLESVYKDWWKGSCKNAVGIF 264
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 33.5 bits (73), Expect = 0.003
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 23 KIVVALYPFKAIESGDLSLEKGAEYEVI---DDSQDHWWKVKDENG 65
+ V+AL+ F S +L L +G +Y +I ++ D WW+ +DE G
Sbjct: 5 RFVIALHSFPGKSSDELPLVEGRKYLLIKMDEEFGDGWWEGEDEQG 50
>SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein
Tea4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 31.9 bits (69), Expect = 0.011
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 25 VVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVK 61
V A+ F+A G + KG ++DDS +WW VK
Sbjct: 123 VHAIRGFEATVEGQVDATKGDMMILLDDSNSYWWLVK 159
>SPAPJ696.02 |||actin cortical patch component Lsb4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 31.9 bits (69), Expect = 0.011
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 27 ALYPFKAIESGDLSLEKGAEYEVID--DSQDHWW 58
A+Y F + GDLS +KG ++++ S D WW
Sbjct: 378 AMYSFAGEQPGDLSFQKGDIIDIVERSGSHDDWW 411
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 31.1 bits (67), Expect = 0.019
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 19 KPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWW 58
+P V+ALY ++A ++S +KG V+ +D WW
Sbjct: 865 EPILGYVIALYDYQAQIPEEISFQKGDTLMVLRTQEDGWW 904
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1611
Score = 30.7 bits (66), Expect = 0.025
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 25 VVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWW 58
VVALYP+++ S DL + G +V+ + W+
Sbjct: 8 VVALYPYRSSFSDDLEFDPGQVIDVVSNLDGDWY 41
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 30.3 bits (65), Expect = 0.032
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 25 VVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWK 59
V+A+Y F ++GDL G V++ + WW+
Sbjct: 145 VLAMYDFPGPDAGDLGFHAGEVIIVLEHVNNDWWR 179
>SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 30.3 bits (65), Expect = 0.032
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 12 PSAKPKEKPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWK 59
P+ P P V ALY +KA ++ L V++ +D WWK
Sbjct: 344 PTITPDGFPIFAYVRALYAYKATLPSEIDLNVDDTLVVLNRQKDGWWK 391
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 30.3 bits (65), Expect = 0.032
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 12 PSAKPKEKPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWW 58
P P E + + +ALY F +++++K E++ WW
Sbjct: 1098 PPPPPAEVEKKDLYLALYDFAGRSPNEMTIKKDEIIEIVQKEPSGWW 1144
>SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 29.5 bits (63), Expect = 0.057
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 19 KPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWW 58
+P K++ ALY + A ++ ++S KG + VI D W
Sbjct: 23 EPPRKVIRALYDYTARKATEVSFAKGDFFHVIGRENDKAW 62
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.1 bits (62), Expect = 0.075
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 12 PSAKPKEKPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWK 59
P A+P+ K V A+Y ++A E +LS + +D +WW+
Sbjct: 792 PPAEPQAGGPGKSVKAIYDYQAQEDNELSFFEDEIIANVDCVDPNWWE 839
>SPCC24B10.13 |skb5||Shk1 kinase binding protein
5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 140
Score = 27.1 bits (57), Expect = 0.30
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 26 VALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDE 63
VALY F+ + +L G ++ +S D W D+
Sbjct: 86 VALYDFEPLHDNELGFTTGQRLCILSESSDGWLIAYDD 123
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 27.1 bits (57), Expect = 0.30
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 25 VVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWK 59
V ALY + A ++S KG V+ +D WW+
Sbjct: 612 VSALYDYDAAIPEEISFRKGDTIAVLKLYEDGWWE 646
>SPBC418.01c |his4|SPBC887.20c|imidazoleglycerol-phosphate
synthase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 541
Score = 26.6 bits (56), Expect = 0.40
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 22 TKIVVALYPFKAIESGDLSLEKGAEYEVIDDS 53
TK ++A ++ ++GDL + KG +Y+V + S
Sbjct: 229 TKRIIACLDVRSNDAGDLVVTKGDQYDVREKS 260
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 26.6 bits (56), Expect = 0.40
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 11 TPSAKPKEKPR--TKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDENGYGD 68
TP + PK K + T V A+Y F +L L G +V + W+ + N +
Sbjct: 268 TPFSTPKRKSKKETVFVKAIYSFTGRNEKELDLHTGDVIQVSEQLGPDWYMGEKVNSKAE 327
Query: 69 FL 70
L
Sbjct: 328 KL 329
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 26.2 bits (55), Expect = 0.53
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 16 PKEKPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWW 58
PK+ P +V ALY + GDL +G E + WW
Sbjct: 4 PKQLPC--MVRALYAWPGEREGDLKFTEGDLIECLSIGDGKWW 44
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 25.8 bits (54), Expect = 0.70
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 23 KIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWW 58
K+V Y F+ +L L+KG V+ + + WW
Sbjct: 424 KVVRMKYSFEPETENELKLKKGDLLLVLKEIDEGWW 459
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 25.4 bits (53), Expect = 0.92
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 11 TPSAKPKEKPRTKIV-VALYPFKAIESGDLSLEKGAEYEVID-DSQDHWWKVK 61
T P E P +K+ V LY F G ++ +G E+ +++ D W +VK
Sbjct: 506 TEETTPAE-PASKVDGVVLYDFTGEHEGVITASEGQEFTLLEPDDGSGWVRVK 557
Score = 22.6 bits (46), Expect = 6.5
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 25 VVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDENG 65
V ALY + A +LS+++G +V + + + W NG
Sbjct: 589 VKALYAYTAQSDMELSIQEGDIIQVTNRNAGNGWSEGILNG 629
>SPBC1773.12 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 594
Score = 23.0 bits (47), Expect = 4.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 30 PFKAIESGDLSLEKGAEYEVIDD 52
PF+ + S L +EKG E I+D
Sbjct: 514 PFQILFSNILKMEKGTSDEKIED 536
>SPAP27G11.05c |vps41||vacuolar protein sorting-associated protein
Vps41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 886
Score = 23.0 bits (47), Expect = 4.9
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 28 LYPFKAIESGDLSLEKGAEYE 48
+YP +E GDL L+ AE++
Sbjct: 608 MYPNSLMEYGDLKLDVFAEFD 628
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 23.0 bits (47), Expect = 4.9
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 11 TPSAKPKEKPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQ 54
T S +K K+ + +P K +GD E YE++ D +
Sbjct: 16 TASQAELKKAYRKLALKYHPDKNPNAGDKFKEISRAYEILADEE 59
>SPBC4B4.02c |nca2||mitochondrial protein Nca2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 22.6 bits (46), Expect = 6.5
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 41 LEKGAEYEVIDDSQDHWWKVKDENGYGDFLFI 72
L++ E +I H+W+ D+N Y LF+
Sbjct: 83 LDQLLEEAMIMSDNLHYWESIDKNWYSRVLFL 114
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 22.2 bits (45), Expect = 8.6
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 49 VIDDSQDHWWKVKDENG 65
++ D+QDH +K K G
Sbjct: 1349 IVTDNQDHSFKTKSRKG 1365
>SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1163
Score = 22.2 bits (45), Expect = 8.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 13 SAKPKEKPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDS 53
S P++K + FK+ E G L + E E+I+DS
Sbjct: 1049 STDPRKKLAARKQKLNSAFKSNEEGRLLINDSDEDELIEDS 1089
>SPAC9.12c |atp12||F1-ATPase chaperone Atp12 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 287
Score = 22.2 bits (45), Expect = 8.6
Identities = 9/26 (34%), Positives = 18/26 (69%), Gaps = 4/26 (15%)
Query: 46 EYE--VIDDSQDHWWKVKD--ENGYG 67
EYE ++++ +++WW +K+ EN G
Sbjct: 145 EYEGKLLEEQKENWWPLKETFENKLG 170
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 22.2 bits (45), Expect = 8.6
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 21 RTKIVVALYPFKAIESGDLSLEKGA 45
+TK+ + L P K +++ D SL + A
Sbjct: 394 QTKVSLKLSPIKVVKAPDGSLSRAA 418
>SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase
Cdc7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1062
Score = 22.2 bits (45), Expect = 8.6
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 18 EKPRTKIVVALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKVKDENGYGDFLF 71
E PR ++P +I+ L E G V++ W ++E+G +F
Sbjct: 441 ETPRDSEFTDIFPTSSIKVQGLRKETGLGTLVLNKCYGSWNNEENEDGEESDIF 494
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.136 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 334,124
Number of Sequences: 5004
Number of extensions: 10739
Number of successful extensions: 34
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 29
length of query: 72
length of database: 2,362,478
effective HSP length: 52
effective length of query: 20
effective length of database: 2,102,270
effective search space: 42045400
effective search space used: 42045400
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 45 (22.2 bits)
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