GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000972-TA|BGIBMGA000972-PA|IPR001452|Src homology-3
         (72 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    20   3.4  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    20   3.4  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    19   4.5  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    19   4.5  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              19   6.0  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              19   6.0  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    19   6.0  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              19   7.9  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              19   7.9  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              19   7.9  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    19   7.9  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 19.8 bits (39), Expect = 3.4
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 2/46 (4%)

Query: 26  VALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKV--KDENGYGDF 69
           +  YPF  +    +     A+ E++  S  H W    K E G   F
Sbjct: 228 IVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFF 273


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 19.8 bits (39), Expect = 3.4
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 2/46 (4%)

Query: 26  VALYPFKAIESGDLSLEKGAEYEVIDDSQDHWWKV--KDENGYGDF 69
           +  YPF  +    +     A+ E++  S  H W    K E G   F
Sbjct: 228 IVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFF 273


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase
          domain protein protein.
          Length = 448

 Score = 19.4 bits (38), Expect = 4.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 43 KGAEYEVIDDSQDH 56
          K  EYEV+ D+ D+
Sbjct: 41 KEVEYEVVRDAYDN 54


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 19.4 bits (38), Expect = 4.5
 Identities = 5/10 (50%), Positives = 8/10 (80%)

Query: 48  EVIDDSQDHW 57
           E ++DS D+W
Sbjct: 522 EFVEDSDDYW 531


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 19.0 bits (37), Expect = 6.0
 Identities = 7/22 (31%), Positives = 13/22 (59%)

Query: 42 EKGAEYEVIDDSQDHWWKVKDE 63
          E G + + +DD  +  + V+DE
Sbjct: 36 ESGIDQQTVDDINEVNFDVEDE 57


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 19.0 bits (37), Expect = 6.0
 Identities = 7/22 (31%), Positives = 13/22 (59%)

Query: 42 EKGAEYEVIDDSQDHWWKVKDE 63
          E G + + +DD  +  + V+DE
Sbjct: 36 ESGIDQQTVDDINEVNFDVEDE 57


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 19.0 bits (37), Expect = 6.0
 Identities = 6/11 (54%), Positives = 8/11 (72%)

Query: 55  DHWWKVKDENG 65
           + W KV D+NG
Sbjct: 327 ERWQKVIDQNG 337


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 18.6 bits (36), Expect = 7.9
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 42 EKGAEYEVIDDSQDHWWKVKDEN 64
          E G   ++IDD  +    + DEN
Sbjct: 36 EIGTAQQIIDDINEGKINMDDEN 58


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 18.6 bits (36), Expect = 7.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 42 EKGAEYEVIDDSQDHWWKVKDEN 64
          E G   ++ID+  +    V+DEN
Sbjct: 36 ETGTSQKIIDEVYNGNVNVEDEN 58


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 18.6 bits (36), Expect = 7.9
 Identities = 7/21 (33%), Positives = 12/21 (57%)

Query: 44 GAEYEVIDDSQDHWWKVKDEN 64
          G   ++I+D  D    ++DEN
Sbjct: 38 GINKQIINDVNDGKINIEDEN 58


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 18.6 bits (36), Expect = 7.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)

Query: 12  PSAKPKEKPRTKIV 25
           P AKP EK   K++
Sbjct: 93  PRAKPGEKKFRKVI 106


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.314    0.136    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,908
Number of Sequences: 429
Number of extensions: 608
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of query: 72
length of database: 140,377
effective HSP length: 46
effective length of query: 26
effective length of database: 120,643
effective search space:  3136718
effective search space used:  3136718
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.2 bits)
S2: 36 (18.6 bits)