GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000971-TA|BGIBMGA000971-PA|IPR008012|Proteasome
maturation factor UMP1
         (142 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   0.79 
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   1.8  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   2.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   3.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        20   7.4  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    20   9.8  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.4 bits (48), Expect = 0.79
 Identities = 10/48 (20%), Positives = 23/48 (47%)

Query: 46  VHPLEASEKNYHLNEEKLNLAMLRNVQGLHAPMKITMERKFASKVGRL 93
           +HP E S  + + N+    L  +RN++G    ++     +  + + +L
Sbjct: 258 LHPAETSMNDANRNDCAKPLTQIRNIRGPRKRLRFAYVTRTGANIKKL 305


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 46  VHPLEASEKNYHLNEEKLNLAMLRNVQG 73
           +HP E S  + + N+    L  +RN+ G
Sbjct: 258 LHPAETSMNDVNRNDCAKPLTQIRNIPG 285


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 46  VHPLEASEKNYHLNEEKLNLAMLRNVQG 73
           +HP E S  + + N+    L  +RN+ G
Sbjct: 258 LHPAETSMNDANRNDCAKPLTQIRNIPG 285


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query: 113 IGFEDILNTRDLCE 126
           +GFEDI + RD  E
Sbjct: 939 VGFEDIKSVRDKAE 952


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 11/37 (29%), Positives = 15/37 (40%)

Query: 38  ATRPKLGFVHPLEASEKNYHLNEEKLNLAMLRNVQGL 74
           +T P L   H +  +    H      NL  L N+Q L
Sbjct: 331 STSPNLPLTHNIAHNPYPSHSIYPSSNLMPLNNIQNL 367


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 74  LHAPMKITMERKFASKVGRLPFLP 97
           +H P+ IT E+  A    +LP  P
Sbjct: 243 VHEPLLITTEKLAAEGQTKLPQQP 266


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.139    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,933
Number of Sequences: 317
Number of extensions: 1067
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 142
length of database: 114,650
effective HSP length: 51
effective length of query: 91
effective length of database: 98,483
effective search space:  8961953
effective search space used:  8961953
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
S2: 39 (19.8 bits)