GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000971-TA|BGIBMGA000971-PA|IPR008012|Proteasome
maturation factor UMP1
         (142 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   3.9  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    22   6.8  
AY745209-1|AAU93476.1|  167|Anopheles gambiae cytochrome P450 pr...    22   8.9  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    22   8.9  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 56  YHLNEEKLNLAMLRNVQGLHAPMKITME 83
           Y L EE L+L   RN  GLH  +    E
Sbjct: 770 YQLAEELLDLPNDRNETGLHLAVSCNSE 797


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 52  SEKNYHLNEEKLNLAMLRNVQGLHAPMKITME 83
           S +N H N  +  +A+   VQ +HA   +  E
Sbjct: 169 SPENCHSNRAEFLIAIFTTVQPMHASQPLRGE 200


>AY745209-1|AAU93476.1|  167|Anopheles gambiae cytochrome P450
          protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 30 DPMIAGLGATRPKLGFVHPLEASEKNYHLNEEK 62
          D  IAG G T+  + F++  E +    + +E K
Sbjct: 46 DTCIAGYGVTKGTVVFINNYELNTSERYWSEPK 78


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/46 (21%), Positives = 21/46 (45%)

Query: 57  HLNEEKLNLAMLRNVQGLHAPMKITMERKFASKVGRLPFLPSSNLQ 102
           H + +KL + + ++   +H P      R+ +      PFL   +L+
Sbjct: 816 HHDPQKLRIVVSKSANAMHPPRGSRHTRQGSEASSPPPFLDDRSLK 861


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.139    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,305
Number of Sequences: 2123
Number of extensions: 5282
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 4
length of query: 142
length of database: 516,269
effective HSP length: 58
effective length of query: 84
effective length of database: 393,135
effective search space: 33023340
effective search space used: 33023340
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)