Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000971-TA|BGIBMGA000971-PA|IPR008012|Proteasome
maturation factor UMP1
(142 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 2.9
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 2.9
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 2.9
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 2.9
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 2.9
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 2.9
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 2.9
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 2.9
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 2.9
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 2.9
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 22 2.9
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 6.6
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 21 6.6
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 2.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 46 VHPLEASEKNYHLNEEKLNLAMLRN 70
+ + A EKN +K+N+A LR+
Sbjct: 240 IQAVAAHEKNMREQAKKMNVASLRS 264
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 2.9
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 7 PLKVKPEHDDNGVKIQENTFGIRDPMIAGLGAT 39
P V +H D+ K E F + DP G T
Sbjct: 334 PPGVPGDHGDHAPKQTEVRFKVHDPKAHSKGGT 366
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 2.9
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 7 PLKVKPEHDDNGVKIQENTFGIRDPMIAGLGAT 39
P V +H D+ K E F + DP G T
Sbjct: 334 PPGVPGDHGDHAPKQTEVRFKVHDPKAHSKGGT 366
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 2.9
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 55 NYHLNEEKLNLAMLRNVQGLHAPMKITMERKFASKVGRLPFLPSSNLQHDVLTGRYI 111
NY+ N +KL + N++ + P+ I + P P ++Q V RYI
Sbjct: 100 NYNTNYKKLQYYNIINIEQIPVPVPI-----YCGNFPPRPMGPWISIQEQVPRFRYI 151
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 2.9
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 55 NYHLNEEKLNLAMLRNVQGLHAPMKITMERKFASKVGRLPFLPSSNLQHDVLTGRYI 111
NY+ N +KL + N++ + P+ I + P P ++Q V RYI
Sbjct: 100 NYNTNYKKLQYYNIINIEQIPVPVPI-----YCGNFPPRPMGPWISIQEQVPRFRYI 151
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 2.9
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 55 NYHLNEEKLNLAMLRNVQGLHAPMKITMERKFASKVGRLPFLPSSNLQHDVLTGRYI 111
NY+ N +KL + N++ + P+ I + P P ++Q V RYI
Sbjct: 100 NYNTNYKKLQYYNIINIEQIPVPVPI-----YCGNFPPRPMGPWISIQEQVPRFRYI 151
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 2.9
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 55 NYHLNEEKLNLAMLRNVQGLHAPMKITMERKFASKVGRLPFLPSSNLQHDVLTGRYI 111
NY+ N +KL + N++ + P+ I + P P ++Q V RYI
Sbjct: 100 NYNTNYKKLQYYNIINIEQIPVPVPI-----YCGNFPPRPMGPWISIQEQVPRFRYI 151
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 2.9
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 55 NYHLNEEKLNLAMLRNVQGLHAPMKITMERKFASKVGRLPFLPSSNLQHDVLTGRYI 111
NY+ N +KL + N++ + P+ I + P P ++Q V RYI
Sbjct: 100 NYNTNYKKLQYYNIINIEQIPVPVPI-----YCGNFPPRPMGPWISIQEQVPRFRYI 151
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 2.9
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 55 NYHLNEEKLNLAMLRNVQGLHAPMKITMERKFASKVGRLPFLPSSNLQHDVLTGRYI 111
NY+ N +KL + N++ + P+ I + P P ++Q V RYI
Sbjct: 104 NYNTNYKKLQYYNIINIEQIPVPVPI-----YCGNFPPRPMGPWISIQEQVPRFRYI 155
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 2.9
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 55 NYHLNEEKLNLAMLRNVQGLHAPMKITMERKFASKVGRLPFLPSSNLQHDVLTGRYI 111
NY+ N +KL + N++ + P+ I + P P ++Q V RYI
Sbjct: 100 NYNTNYKKLQYYNIINIEQIPVPVPI-----YCGNFPPRPMGPWISIQEQVPRFRYI 151
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 21.8 bits (44), Expect = 2.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 46 VHPLEASEKNYHLNEEKLNLAMLRN 70
+ + A EKN +K+N+A LR+
Sbjct: 116 IQAVAAHEKNMREQAKKMNVASLRS 140
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 6.6
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 55 NYHLNEEKLNLAMLRNVQGLHAPMKI 80
NY+ N +KL + N++ + P+ I
Sbjct: 100 NYNTNYKKLQYYNIINIEQIPVPVPI 125
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 20.6 bits (41), Expect = 6.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 114 GFEDILNTRDLCETAGQ 130
G EDILNT+ L + +
Sbjct: 295 GSEDILNTQSLAKAVSK 311
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.319 0.139 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,257
Number of Sequences: 429
Number of extensions: 1527
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of query: 142
length of database: 140,377
effective HSP length: 52
effective length of query: 90
effective length of database: 118,069
effective search space: 10626210
effective search space used: 10626210
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.3 bits)
S2: 40 (20.2 bits)
- SilkBase 1999-2023 -