Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000970-TA|BGIBMGA000970-PA|IPR009244|MED7
(219 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35032| Best HMM Match : MED7 (HMM E-Value=7.6e-08) 86 2e-17
SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053) 33 0.19
SB_39685| Best HMM Match : ANTH (HMM E-Value=1.5e-11) 32 0.32
SB_39817| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_57118| Best HMM Match : TMS_TDE (HMM E-Value=0) 29 3.0
SB_47959| Best HMM Match : rve (HMM E-Value=3e-29) 29 4.0
SB_11157| Best HMM Match : NUC173 (HMM E-Value=9.2e-39) 29 4.0
SB_3768| Best HMM Match : Involucrin (HMM E-Value=0.021) 29 4.0
SB_7412| Best HMM Match : IRK (HMM E-Value=2.2e-20) 28 5.3
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 28 5.3
SB_39528| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_25312| Best HMM Match : Vicilin_N (HMM E-Value=0.61) 28 7.0
SB_4655| Best HMM Match : Spectrin (HMM E-Value=0) 28 7.0
SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
>SB_35032| Best HMM Match : MED7 (HMM E-Value=7.6e-08)
Length = 418
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/63 (60%), Positives = 45/63 (71%)
Query: 7 VSSLPLPPMQYINFYTDENVRRNRAPLPPRPIHDSYSMFGNSFNADDAIIRSLESQGFRR 66
VS PLPP+QY YTDEN+ + AP PP PI SYS+FG SF +D++IIR LE QG R
Sbjct: 31 VSPFPLPPIQYSKLYTDENIAQGNAPEPPPPIEGSYSVFGASFESDESIIRPLEVQGITR 90
Query: 67 LYP 69
LYP
Sbjct: 91 LYP 93
>SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053)
Length = 1152
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 137 VMMEL-QKRQRVETAARFKKHLDKVQDILQNALQSLPDQNELESNFKVPNELLDQMENNT 195
+MM L KR R E A+FK+ +DI+ ALQ ++ +E +++D+ +N
Sbjct: 18 LMMPLFPKRTRKELKAKFKREEKLHRDIIDKALQQSKYRDIIEKARSKYRDIIDKAQNKY 77
Query: 196 CNIQKA 201
+I KA
Sbjct: 78 RDIDKA 83
>SB_39685| Best HMM Match : ANTH (HMM E-Value=1.5e-11)
Length = 523
Score = 32.3 bits (70), Expect = 0.32
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 152 RFKKHLDKVQDILQNALQSLPDQNELESNFKVPNELLDQMENNTCNIQK 200
RF +D+V + ++ A D+ ++ K PN LLD +EN+ ++K
Sbjct: 223 RFVTRMDRVSEFMKTAEDVGFDKEDIPDLSKAPNSLLDALENHYQALEK 271
>SB_39817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 32.3 bits (70), Expect = 0.32
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 152 RFKKHLDKVQDILQNALQSLPDQNELESNFKVPNELLDQMENNTCNIQK 200
RF +D+V + ++ A D+ ++ K PN LLD +EN+ ++K
Sbjct: 204 RFVTRMDRVSEFMKTAEDVGFDKEDIPDLSKAPNSLLDALENHYQALEK 252
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 130 QARETLRVMMELQKRQRVETAARFKKHLDKVQDILQNALQSLPDQNELES----NFKVPN 185
Q E + ELQK + + + +K D +D+ + L+ Q ELE+ KV
Sbjct: 938 QLHEMELAIAELQKEKEMVDEEQDRKVKDAEKDLEEVKLERRKHQEELETLKDKTLKVER 997
Query: 186 ELLD-QMENNTCNIQKA 201
EL D Q EN NI+ +
Sbjct: 998 ELRDSQQENIKMNIENS 1014
>SB_57118| Best HMM Match : TMS_TDE (HMM E-Value=0)
Length = 1457
Score = 29.1 bits (62), Expect = 3.0
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 124 NEFRPHQAR-ETLRVMMELQKRQRVETAARFKKHLD-KVQDILQNALQSLPDQN-ELESN 180
NEF ++R ++ E K++R + +H+ K+ DI +N + + D+ E+E+
Sbjct: 487 NEFEQARSRARKAKIEFETVKKERYDRFMSAFEHVSTKIDDIYKN--KRVKDKELEMENK 544
Query: 181 FKVPNELLDQMENNTCNIQKAD 202
E L Q+++ NI KAD
Sbjct: 545 VWQQEEKLRQLKDIVQNIAKAD 566
>SB_47959| Best HMM Match : rve (HMM E-Value=3e-29)
Length = 622
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 126 FRPHQARETLRVMMELQKRQRVETAARFKKHLDKVQDILQNALQSLPDQNELESNFKVPN 185
F+ H RE R+ + Q+ Q + L++ + + N L + +LE N VP
Sbjct: 401 FKAH--REANRIEQDGQEVQEEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVPL 458
Query: 186 ELLDQMENN 194
E +Q+E+N
Sbjct: 459 EQEEQLEDN 467
>SB_11157| Best HMM Match : NUC173 (HMM E-Value=9.2e-39)
Length = 1060
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 130 QARETLRVMMELQKRQRVETAARFKKHLDKVQDILQNALQSLPDQNELESNFKVP 184
Q ++ RV+ ++ A HLD++QD L N+L S ++ S+ P
Sbjct: 575 QQKKAYRVLEQMCSSDSQACRAFLSSHLDQLQDKLLNSLASSSSASKAVSHLSTP 629
>SB_3768| Best HMM Match : Involucrin (HMM E-Value=0.021)
Length = 205
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 126 FRPHQARETLRVMMELQKRQRVETAARFKKHLDKVQDILQNALQSLPDQNELESNFKVPN 185
F+ H RE R+ + Q+ Q + L++ + + N L + +LE N VP
Sbjct: 95 FKAH--REANRIEQDGQEVQEEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVPL 152
Query: 186 ELLDQMENN 194
E +Q+E+N
Sbjct: 153 EQEEQLEDN 161
>SB_7412| Best HMM Match : IRK (HMM E-Value=2.2e-20)
Length = 610
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 138 MMELQKRQRVETAARFKKHLDKVQDILQNALQSLPDQNELESNFKVPNELLDQMENNTCN 197
M ++ + + R + DK+QD LQNA+ NE+ NE++ +++N+ N
Sbjct: 219 MTAIRTERHEQRQKRSSQMADKLQDELQNAIDD--RDNEIAKR----NEIIRRLKNDIFN 272
Query: 198 IQK 200
+ K
Sbjct: 273 VDK 275
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 6 QVSSLPL--PPMQYINFYTDENVRRNRAPLPPRPIHDSYSMFG 46
Q+++ P+ PP Q + NVR + PLPP P+ SM G
Sbjct: 61 QITARPVAPPPNQQQMPFFPRNVRPHTGPLPPPPMMPRVSMPG 103
>SB_39528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1029
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 126 FRPHQARETLRVMMELQKRQRVETAARFKKHLDKVQDILQNALQSLPDQNELESNFKVPN 185
F+ H RE +R+ + Q+ Q + L++ + + N L + +LE N VP
Sbjct: 872 FKAH--REVIRIEQDGQEVQEEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVPL 929
Query: 186 ELLDQMEN 193
E +Q+E+
Sbjct: 930 EEEEQLED 937
>SB_25312| Best HMM Match : Vicilin_N (HMM E-Value=0.61)
Length = 219
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 126 FRPHQARETLRVMMELQKRQRVETAARFKKHLDKVQDILQNALQSLPDQNELESNFKVPN 185
F+ H RE +R+ + Q+ Q + L++ + + N L + +LE N VP
Sbjct: 95 FKAH--REVIRIEQDGQEVQEEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVPL 152
Query: 186 ELLDQMEN 193
E +Q+E+
Sbjct: 153 EEEEQLED 160
>SB_4655| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 934
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 127 RPHQARETLRVMMELQKRQRVETAARFKKHLDKVQDILQNALQSLPDQNELESNFKVPNE 186
R H RE VM + +++ + T+ + L+ V + + L D ES N+
Sbjct: 155 RVHYLREVDEVMSWISEKEAIATSEEIGRDLEHVVVLQKKFDDFLKDLQANESRVTYIND 214
Query: 187 LLDQM 191
L DQ+
Sbjct: 215 LADQL 219
>SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4700
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 126 FRPHQARETLRVMMELQKRQRVETAARFKKHLDKVQDILQNALQSLPDQNELESNFKVPN 185
F+ H RE R+ + Q+ Q + L++ + + N SL + +LE N V
Sbjct: 3776 FKAH--REVNRIEQDGQEVQEEQLEDNPTVPLEQEEQLEDNPTASLEQEEQLEDNPTVSL 3833
Query: 186 ELLDQMENN 194
E +Q+E+N
Sbjct: 3834 EQEEQLEDN 3842
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 157 LDKVQDILQNALQSLPDQNELESNFKVPNELLDQMENN 194
L++ + + N SL + +LE N VP E +Q+E+N
Sbjct: 3819 LEQEEQLEDNPTVSLEQEEQLEDNPTVPLEQEEQLEDN 3856
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 157 LDKVQDILQNALQSLPDQNELESNFKVPNELLDQMENN 194
L++ + + N SL + +LE N VP E +Q+E+N
Sbjct: 3847 LEQEEQLEDNPTVSLEQEEQLEDNPTVPLEQEEQLEDN 3884
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 157 LDKVQDILQNALQSLPDQNELESNFKVPNELLDQMENN 194
L++ + + N SL + +LE N VP E +Q+E+N
Sbjct: 3875 LEQEEQLEDNPTVSLEQEEQLEDNPTVPLEQEEQLEDN 3912
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.133 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,353,763
Number of Sequences: 59808
Number of extensions: 230152
Number of successful extensions: 674
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 643
Number of HSP's gapped (non-prelim): 32
length of query: 219
length of database: 16,821,457
effective HSP length: 79
effective length of query: 140
effective length of database: 12,096,625
effective search space: 1693527500
effective search space used: 1693527500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 58 (27.5 bits)
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