GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000970-TA|BGIBMGA000970-PA|IPR009244|MED7
         (219 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50475-1|AAA93477.1|  207|Anopheles gambiae protein ( Anopheles ...    26   1.0  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   1.8  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   5.3  
AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein p...    23   5.3  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   9.3  

>U50475-1|AAA93477.1|  207|Anopheles gambiae protein ( Anopheles
           gambiae putativearylphorin precursor, mRNA, partial cds.
           ).
          Length = 207

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 14  PMQYINFYTDENVRRNRAPLPPRPIHDSYSMFGNSFNADDAIIRSLESQGFRRLYPMHFE 73
           PMQ  + Y D  V   +  L  +P   SY+M   S     AIIR+     F R + + F 
Sbjct: 144 PMQSADKYFDYAVFARQRRLNHKPF--SYTMNVMSDYTGKAIIRAFVGPKFDRFFDLQFY 201

Query: 74  R 74
           R
Sbjct: 202 R 202


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 131 ARETLRVMMELQKRQRVETAAR-FKKHLDK-VQDILQNALQSLPDQNELESNFKVPNELL 188
           ARE LR++ +LQ+R  V    R  K++L+K ++   +  + +L D  E ++ F     ++
Sbjct: 319 ARERLRLITDLQERSFVAADHRTAKRNLEKAIRASKRQQIDALIDTAE-DNEFGGGYRVV 377

Query: 189 DQMENNTCNIQKADPCFELDRIMCNVVDN 217
                 +   Q+ DP  EL RI+ ++  N
Sbjct: 378 MSTLRGSRVPQEKDP-IELGRIVSDLFPN 405


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 130 QARETLRVMMEL--QKRQRVETAARFKKHLDKVQDILQNALQSLPD 173
           + +ET + + EL  Q++   +      + + K QD L+NA ++L D
Sbjct: 231 ELKETRKQLEELDGQRKSSGDKQLLLTQEIQKAQDRLKNAQKALKD 276


>AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein
           protein.
          Length = 234

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 45  FGNSFNADDAIIRSLESQGFRRLYP 69
           F    NAD+  +   ++ GFRRL P
Sbjct: 199 FEGQMNADNIEVGICDANGFRRLDP 223


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 2/40 (5%)

Query: 124 NEFRPHQARETLRVMMELQK--RQRVETAARFKKHLDKVQ 161
           N+ R  + ++ +  + E ++  +QR   AAR + HLD+++
Sbjct: 380 NQARAAEEKDRIASIKEREQTEQQRQLRAARMQAHLDEIE 419


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.133    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,246
Number of Sequences: 2123
Number of extensions: 6779
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 5
length of query: 219
length of database: 516,269
effective HSP length: 62
effective length of query: 157
effective length of database: 384,643
effective search space: 60388951
effective search space used: 60388951
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 46 (22.6 bits)