Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000970-TA|BGIBMGA000970-PA|IPR009244|MED7
(219 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032653-5|CAC42382.1| 251|Caenorhabditis elegans Hypothetical ... 89 2e-18
AL032653-4|CAA21715.1| 253|Caenorhabditis elegans Hypothetical ... 84 7e-17
U23510-6|AAC46784.2| 236|Caenorhabditis elegans Hypothetical pr... 34 0.069
Z83233-7|CAB05764.2| 340|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z69794-4|CAA93680.1| 747|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z75533-6|CAA99819.1| 378|Caenorhabditis elegans Hypothetical pr... 30 1.5
U80954-2|AAK77629.1| 977|Caenorhabditis elegans Defective in ge... 29 2.6
Z78015-5|CAB01432.2| 258|Caenorhabditis elegans Hypothetical pr... 28 4.5
U50193-10|AAP68919.1| 1098|Caenorhabditis elegans Hypothetical p... 28 4.5
U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z70207-8|CAM33501.1| 835|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z70207-5|CAA94127.2| 914|Caenorhabditis elegans Hypothetical pr... 28 6.0
U80033-4|AAC48198.2| 467|Caenorhabditis elegans Hypothetical pr... 28 6.0
AF316542-1|AAG50270.1| 914|Caenorhabditis elegans serine/threon... 28 6.0
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 27 7.9
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 27 7.9
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 27 7.9
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 27 7.9
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 27 7.9
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 27 7.9
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 27 7.9
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 27 7.9
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 27 7.9
AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain (... 27 7.9
AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical ... 27 7.9
>AL032653-5|CAC42382.1| 251|Caenorhabditis elegans Hypothetical
protein Y54E5B.3b protein.
Length = 251
Score = 89.0 bits (211), Expect = 2e-18
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 2/165 (1%)
Query: 7 VSSLPLPPMQYINFYTDENVRRNRAPLPPRPIHDSYSMFGNSFNADDAIIRSLESQGFRR 66
VS P PP +Y + YT + + AP PP P+ + + ++G + +D +I L++ G
Sbjct: 10 VSPFPNPP-EYASAYTSDRINNGSAPPPPHPLTE-FKVYGEEYRLEDDVIAPLKNAGVAE 67
Query: 67 LYPMHFERRRELKKXXXXXXXXXXXXXXXXVHCPDSPKRAEKVEDXXXXXXXXXXXXNEF 126
LY + E+KK + PD P R EK+ D NEF
Sbjct: 68 LYKNKNNWKTEMKKLNRSAIVAFFDLVEILIRAPDHPMREEKMVDLHTIFINMHHLINEF 127
Query: 127 RPHQARETLRVMMELQKRQRVETAARFKKHLDKVQDILQNALQSL 171
RP QAR+++R++ E Q + + FKK+L ++++ + Q +
Sbjct: 128 RPVQARDSVRILQERQIEELSDICKDFKKYLRDGREVVDDQFQMI 172
>AL032653-4|CAA21715.1| 253|Caenorhabditis elegans Hypothetical
protein Y54E5B.3a protein.
Length = 253
Score = 84.2 bits (199), Expect = 7e-17
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 4/167 (2%)
Query: 7 VSSLPLPPMQYINFYTDENVRRNR--APLPPRPIHDSYSMFGNSFNADDAIIRSLESQGF 64
VS P PP +Y + YT + + + AP PP P+ + + ++G + +D +I L++ G
Sbjct: 10 VSPFPNPP-EYASAYTSDRINNDSGSAPPPPHPLTE-FKVYGEEYRLEDDVIAPLKNAGV 67
Query: 65 RRLYPMHFERRRELKKXXXXXXXXXXXXXXXXVHCPDSPKRAEKVEDXXXXXXXXXXXXN 124
LY + E+KK + PD P R EK+ D N
Sbjct: 68 AELYKNKNNWKTEMKKLNRSAIVAFFDLVEILIRAPDHPMREEKMVDLHTIFINMHHLIN 127
Query: 125 EFRPHQARETLRVMMELQKRQRVETAARFKKHLDKVQDILQNALQSL 171
EFRP QAR+++R++ E Q + + FKK+L ++++ + Q +
Sbjct: 128 EFRPVQARDSVRILQERQIEELSDICKDFKKYLRDGREVVDDQFQMI 174
>U23510-6|AAC46784.2| 236|Caenorhabditis elegans Hypothetical
protein R12C12.5 protein.
Length = 236
Score = 34.3 bits (75), Expect = 0.069
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 125 EFRPHQARETLRVMMELQKRQRVETAARFKKHLDKVQDILQNALQSLPDQNELESNFKVP 184
E R Q E+ + M+ K+ + A R KKH ++ + L L Q N +
Sbjct: 58 ELRIEQEVESAKKYMKTNKKMAL-AALRKKKHYEQELSRIDGVLTKLEAQRTALENVGMH 116
Query: 185 NELLDQMENNTCNIQKADPCFELDRI 210
NE++D + T ++K ++D++
Sbjct: 117 NEVIDVLGKTTETLKKEHAKMDIDKV 142
>Z83233-7|CAB05764.2| 340|Caenorhabditis elegans Hypothetical
protein K06B4.7 protein.
Length = 340
Score = 31.1 bits (67), Expect = 0.64
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 166 NALQSLPDQ-NELESNFKVPNELLDQMENNTCNIQKADPCFELDRIMCNVVDN 217
N +S P + EL S F + N+ +D M N + +Q +P F+ RIM ++ N
Sbjct: 285 NYSKSAPTRFTELLSLFGIVNKSVDNMNNLSMMLQFCEPKFQFKRIMQDLFSN 337
>Z69794-4|CAA93680.1| 747|Caenorhabditis elegans Hypothetical
protein R03G8.6 protein.
Length = 747
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/59 (23%), Positives = 29/59 (49%)
Query: 14 PMQYINFYTDENVRRNRAPLPPRPIHDSYSMFGNSFNADDAIIRSLESQGFRRLYPMHF 72
PM+ ++F + +N + IH++YS+ G+ + + +I + Q F L M +
Sbjct: 285 PMEKLDFVSVQNFKFGAMENWGLVIHNAYSLIGDPMDVTEIVIHEIAHQWFGNLVTMKY 343
>Z75533-6|CAA99819.1| 378|Caenorhabditis elegans Hypothetical
protein C54G4.7 protein.
Length = 378
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 153 FKKHLDKVQDILQNALQSLPDQNELESNFKVPNELLDQMENNT 195
F++H V D+L++ + S+ QN + K PN+ +EN T
Sbjct: 129 FRRHYLLVDDMLKDGVGSILIQNPFYGDRKPPNQFRSSLENVT 171
>U80954-2|AAK77629.1| 977|Caenorhabditis elegans Defective in germ
line developmentprotein 3, isoform a protein.
Length = 977
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 48 SFNADDAIIRSLESQGFRRLYPMHFER 74
S N DD + S+ QG+ R YP +R
Sbjct: 667 SVNGDDQNVESMHDQGYERQYPRQHQR 693
>Z78015-5|CAB01432.2| 258|Caenorhabditis elegans Hypothetical
protein R02D5.3 protein.
Length = 258
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 42 YSMFGNSFNADDAIIRSLESQG 63
YS G++ DD+IIRS+ QG
Sbjct: 156 YSSIGSAIRIDDSIIRSISEQG 177
>U50193-10|AAP68919.1| 1098|Caenorhabditis elegans Hypothetical
protein ZK328.7b protein.
Length = 1098
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 141 LQKRQRVETAARFKKHLDKVQDILQNALQSLP 172
L K+ + ++ F++H++ + ++L+N LQS P
Sbjct: 424 LAKQSKDKSFENFRQHIENLVEMLRNQLQSFP 455
>U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical
protein ZK328.7a protein.
Length = 1332
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 141 LQKRQRVETAARFKKHLDKVQDILQNALQSLP 172
L K+ + ++ F++H++ + ++L+N LQS P
Sbjct: 424 LAKQSKDKSFENFRQHIENLVEMLRNQLQSFP 455
>Z70207-8|CAM33501.1| 835|Caenorhabditis elegans Hypothetical
protein F15A2.6b protein.
Length = 835
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 152 RFKKHLDKVQDILQNALQSLPDQNELESNFKVPNELLDQMENNTCN 197
RFK+ ++ + ILQN+ Q D+ + + P L D + C+
Sbjct: 743 RFKRLVEHLSAILQNSTQQRADRQQQAALMVRPRRLSDSSVGSACS 788
>Z70207-5|CAA94127.2| 914|Caenorhabditis elegans Hypothetical
protein F15A2.6a protein.
Length = 914
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 152 RFKKHLDKVQDILQNALQSLPDQNELESNFKVPNELLDQMENNTCN 197
RFK+ ++ + ILQN+ Q D+ + + P L D + C+
Sbjct: 743 RFKRLVEHLSAILQNSTQQRADRQQQAALMVRPRRLSDSSVGSACS 788
>U80033-4|AAC48198.2| 467|Caenorhabditis elegans Hypothetical
protein T23H2.4 protein.
Length = 467
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 1 MSETAQVSSLPLPPMQYINFYTDENVRRNRAPLPPRPI 38
+S T+ +S P+PP I+F +DE +P+ PI
Sbjct: 396 ISTTSPISLFPIPPTPSISFNSDEKPSSLASPVGILPI 433
>AF316542-1|AAG50270.1| 914|Caenorhabditis elegans serine/threonine
kinase SAD-1 protein.
Length = 914
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 152 RFKKHLDKVQDILQNALQSLPDQNELESNFKVPNELLDQMENNTCN 197
RFK+ ++ + ILQN+ Q D+ + + P L D + C+
Sbjct: 743 RFKRLVEHLSAILQNSTQQRADRQQQAALMVRPRRLSDSSVGSACS 788
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical protein
T06E4.1 protein.
Length = 1295
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 130 QARETLRVMMELQKRQRVETAARFKKHLDKVQDILQNALQSLPD-QNELESNFKVPNELL 188
+ +++L V +R+ E A+ KH D+ Q+ LQ L L Q+ E++ NEL
Sbjct: 928 ELKKSLEVSEAKVQRREEELIAQVSKHRDQ-QEQLQLTLDELKSAQHSTETSRSQSNELA 986
Query: 189 DQMENNTCNIQKADPCFE 206
++E +I A +
Sbjct: 987 ARIEELEASISFAQKALQ 1004
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 126 FRPHQARETLRVMMELQKRQRVETAARFKKHLDKV 160
FRP T ++ + + ++ ETA F H+D+V
Sbjct: 591 FRPRAPTPTASNIVNVSEGEKTETAPAFYSHIDRV 625
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 126 FRPHQARETLRVMMELQKRQRVETAARFKKHLDKV 160
FRP T ++ + + ++ ETA F H+D+V
Sbjct: 805 FRPRAPTPTASNIVNVSEGEKTETAPAFYSHIDRV 839
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 126 FRPHQARETLRVMMELQKRQRVETAARFKKHLDKV 160
FRP T ++ + + ++ ETA F H+D+V
Sbjct: 941 FRPRAPTPTASNIVNVSEGEKTETAPAFYSHIDRV 975
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 126 FRPHQARETLRVMMELQKRQRVETAARFKKHLDKV 160
FRP T ++ + + ++ ETA F H+D+V
Sbjct: 990 FRPRAPTPTASNIVNVSEGEKTETAPAFYSHIDRV 1024
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 126 FRPHQARETLRVMMELQKRQRVETAARFKKHLDKV 160
FRP T ++ + + ++ ETA F H+D+V
Sbjct: 990 FRPRAPTPTASNIVNVSEGEKTETAPAFYSHIDRV 1024
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 126 FRPHQARETLRVMMELQKRQRVETAARFKKHLDKV 160
FRP T ++ + + ++ ETA F H+D+V
Sbjct: 982 FRPRAPTPTASNIVNVSEGEKTETAPAFYSHIDRV 1016
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 126 FRPHQARETLRVMMELQKRQRVETAARFKKHLDKV 160
FRP T ++ + + ++ ETA F H+D+V
Sbjct: 993 FRPRAPTPTASNIVNVSEGEKTETAPAFYSHIDRV 1027
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 126 FRPHQARETLRVMMELQKRQRVETAARFKKHLDKV 160
FRP T ++ + + ++ ETA F H+D+V
Sbjct: 994 FRPRAPTPTASNIVNVSEGEKTETAPAFYSHIDRV 1028
>AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 5
protein.
Length = 1434
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/48 (25%), Positives = 28/48 (58%)
Query: 154 KKHLDKVQDILQNALQSLPDQNELESNFKVPNELLDQMENNTCNIQKA 201
+ +L+ ++I + A++S D +++ +V + LD+ EN + +Q A
Sbjct: 1220 RSNLEIAEEIEEEAVESSDDDGQIDEGKRVIDVELDRNENGSLGVQIA 1267
>AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical
protein Y38C1AB.4 protein.
Length = 1393
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/48 (25%), Positives = 28/48 (58%)
Query: 154 KKHLDKVQDILQNALQSLPDQNELESNFKVPNELLDQMENNTCNIQKA 201
+ +L+ ++I + A++S D +++ +V + LD+ EN + +Q A
Sbjct: 1179 RSNLEIAEEIEEEAVESSDDDGQIDEGKRVIDVELDRNENGSLGVQIA 1226
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.133 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,839,325
Number of Sequences: 27539
Number of extensions: 182687
Number of successful extensions: 665
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 640
Number of HSP's gapped (non-prelim): 25
length of query: 219
length of database: 12,573,161
effective HSP length: 79
effective length of query: 140
effective length of database: 10,397,580
effective search space: 1455661200
effective search space used: 1455661200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 58 (27.5 bits)
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