GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000968-TA|BGIBMGA000968-PA|undefined
         (55 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010219-1|AAQ23537.1|  502|Drosophila melanogaster RH02379p pro...    27   4.1  
AF337553-1|AAL40912.1|  502|Drosophila melanogaster adenosine de...    27   4.1  
AE014297-1743|AAF54979.3|  502|Drosophila melanogaster CG9621-PA...    27   4.1  
BT011454-1|AAR99112.1|  558|Drosophila melanogaster RE36948p pro...    26   5.5  
AF184229-1|AAD55740.1|  919|Drosophila melanogaster BcDNA.LD2797...    26   5.5  
AE014297-2297|AAF55382.1|  968|Drosophila melanogaster CG5208-PA...    26   5.5  

>BT010219-1|AAQ23537.1|  502|Drosophila melanogaster RH02379p
           protein.
          Length = 502

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 5   MQMQHPHCIIPRRVFIWHQRKTSTTTVDQLPK 36
           M    P  ++P R  IW + +   TTVD+L K
Sbjct: 181 MHGPRPEALLPNRKKIWERFENIFTTVDRLYK 212


>AF337553-1|AAL40912.1|  502|Drosophila melanogaster adenosine
           deaminase-related growthfactor D protein.
          Length = 502

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 5   MQMQHPHCIIPRRVFIWHQRKTSTTTVDQLPK 36
           M    P  ++P R  IW + +   TTVD+L K
Sbjct: 181 MHGPRPEALLPNRKKIWERFENIFTTVDRLYK 212


>AE014297-1743|AAF54979.3|  502|Drosophila melanogaster CG9621-PA
           protein.
          Length = 502

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 5   MQMQHPHCIIPRRVFIWHQRKTSTTTVDQLPK 36
           M    P  ++P R  IW + +   TTVD+L K
Sbjct: 181 MHGPRPEALLPNRKKIWERFENIFTTVDRLYK 212


>BT011454-1|AAR99112.1|  558|Drosophila melanogaster RE36948p
           protein.
          Length = 558

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 3   AFMQMQHPHCIIPRRVFIWHQRKTSTTTVDQLP 35
           AFMQ  HPH ++P R+   H  + +T+ + Q P
Sbjct: 399 AFMQPPHPHQMLPPRM-PPHPLQAATSLLGQQP 430


>AF184229-1|AAD55740.1|  919|Drosophila melanogaster BcDNA.LD27979
           protein.
          Length = 919

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 3   AFMQMQHPHCIIPRRVFIWHQRKTSTTTVDQLP 35
           AFMQ  HPH ++P R+   H  + +T+ + Q P
Sbjct: 350 AFMQPPHPHQMLPPRM-PPHPLQAATSLLGQQP 381


>AE014297-2297|AAF55382.1|  968|Drosophila melanogaster CG5208-PA
           protein.
          Length = 968

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 3   AFMQMQHPHCIIPRRVFIWHQRKTSTTTVDQLP 35
           AFMQ  HPH ++P R+   H  + +T+ + Q P
Sbjct: 399 AFMQPPHPHQMLPPRM-PPHPLQAATSLLGQQP 430


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.327    0.137    0.450 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,995,356
Number of Sequences: 52641
Number of extensions: 92787
Number of successful extensions: 397
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 394
Number of HSP's gapped (non-prelim): 6
length of query: 55
length of database: 24,830,863
effective HSP length: 36
effective length of query: 19
effective length of database: 22,935,787
effective search space: 435779953
effective search space used: 435779953
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 53 (25.4 bits)