Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000967-TA|BGIBMGA000967-PA|undefined
(84 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30479| Best HMM Match : WD40 (HMM E-Value=1.1e-06) 30 0.31
SB_2269| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.0
SB_58812| Best HMM Match : Paramecium_SA (HMM E-Value=3.4) 26 5.0
SB_56257| Best HMM Match : Extensin_2 (HMM E-Value=4.5) 26 5.0
SB_39821| Best HMM Match : Fun_ATP-synt_8 (HMM E-Value=3.1) 25 6.7
SB_36759| Best HMM Match : Tryp_alpha_amyl (HMM E-Value=3.6) 25 6.7
SB_35974| Best HMM Match : PUF (HMM E-Value=0.00065) 25 6.7
SB_21138| Best HMM Match : PAN (HMM E-Value=0.18) 25 6.7
SB_1731| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 6.7
SB_47901| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.8
SB_39808| Best HMM Match : EGF_CA (HMM E-Value=6.3e-35) 25 8.8
SB_31062| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.8
>SB_30479| Best HMM Match : WD40 (HMM E-Value=1.1e-06)
Length = 1160
Score = 29.9 bits (64), Expect = 0.31
Identities = 13/77 (16%), Positives = 44/77 (57%)
Query: 6 KMVDAALCEIIQSKIKSVACSASGAAPIDAYLKVVNAALCEIMQSKIKSVACSASGAAPM 65
++V+++LC+ + + + S+S + ++VN++LC+++ + + S+S
Sbjct: 767 QLVNSSLCQHVNASSSQLVNSSSCQLVNASSHQLVNSSLCQLVNASSSQLVNSSSCQLVN 826
Query: 66 DAYLKIVDAALCEIIQS 82
+ ++V+++ C+++ +
Sbjct: 827 ASSSQLVNSSSCQLVNA 843
Score = 29.5 bits (63), Expect = 0.41
Identities = 13/77 (16%), Positives = 44/77 (57%)
Query: 6 KMVDAALCEIIQSKIKSVACSASGAAPIDAYLKVVNAALCEIMQSKIKSVACSASGAAPM 65
++V+++ C+++ + + S+S + ++VN++LC+ + + + S+S
Sbjct: 735 QLVNSSSCQLVNASSSQLVNSSSCQLVNASSHQLVNSSLCQHVNASSSQLVNSSSCQLVN 794
Query: 66 DAYLKIVDAALCEIIQS 82
+ ++V+++LC+++ +
Sbjct: 795 ASSHQLVNSSLCQLVNA 811
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/77 (16%), Positives = 43/77 (55%)
Query: 6 KMVDAALCEIIQSKIKSVACSASGAAPIDAYLKVVNAALCEIMQSKIKSVACSASGAAPM 65
++V+++LC+ + + + S+S + ++VN++LC+ + + + S+S
Sbjct: 687 QLVNSSLCQHVNASSSQLVNSSSCQLVNASSHQLVNSSLCQHVNASSSQLVNSSSCQLVN 746
Query: 66 DAYLKIVDAALCEIIQS 82
+ ++V+++ C+++ +
Sbjct: 747 ASSSQLVNSSSCQLVNA 763
Score = 25.4 bits (53), Expect = 6.7
Identities = 13/77 (16%), Positives = 42/77 (54%)
Query: 6 KMVDAALCEIIQSKIKSVACSASGAAPIDAYLKVVNAALCEIMQSKIKSVACSASGAAPM 65
++V+++ C+ + + + S+S + ++VN++LC+ + + + S+S
Sbjct: 655 QLVNSSSCQHVNASSSQLVNSSSCQLVNASSHQLVNSSLCQHVNASSSQLVNSSSCQLVN 714
Query: 66 DAYLKIVDAALCEIIQS 82
+ ++V+++LC+ + +
Sbjct: 715 ASSHQLVNSSLCQHVNA 731
Score = 25.4 bits (53), Expect = 6.7
Identities = 10/55 (18%), Positives = 32/55 (58%)
Query: 6 KMVDAALCEIIQSKIKSVACSASGAAPIDAYLKVVNAALCEIMQSKIKSVACSAS 60
++V+++LC+++ + + S+S + ++VN++ C+++ + + S+S
Sbjct: 799 QLVNSSLCQLVNASSSQLVNSSSCQLVNASSSQLVNSSSCQLVNASSSQLVNSSS 853
>SB_2269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 25.8 bits (54), Expect = 5.0
Identities = 14/47 (29%), Positives = 19/47 (40%)
Query: 8 VDAALCEIIQSKIKSVACSASGAAPIDAYLKVVNAALCEIMQSKIKS 54
VDAA E ++ K+K V C P+ K + E S S
Sbjct: 197 VDAATIEAVEEKVKQVICKTVTNIPLTEAAKQEEVSSTEYEDSNAHS 243
>SB_58812| Best HMM Match : Paramecium_SA (HMM E-Value=3.4)
Length = 327
Score = 25.8 bits (54), Expect = 5.0
Identities = 17/75 (22%), Positives = 30/75 (40%)
Query: 3 AYLKMVDAALCEIIQSKIKSVACSASGAAPIDAYLKVVNAALCEIMQSKIKSVACSASGA 62
+YL V + C + + S + A + +YL V + C M + S +
Sbjct: 212 SYLNCVPSKTCTAMAISYLNCVPSKTCTAMVISYLNCVPSKTCTAMVKSYLNCVPSKTCT 271
Query: 63 APMDAYLKIVDAALC 77
A + +YL V + C
Sbjct: 272 AMVISYLNCVPSKTC 286
Score = 25.4 bits (53), Expect = 6.7
Identities = 17/75 (22%), Positives = 30/75 (40%)
Query: 3 AYLKMVDAALCEIIQSKIKSVACSASGAAPIDAYLKVVNAALCEIMQSKIKSVACSASGA 62
+YL V + C + + S + A + +YL V + C M + S +
Sbjct: 36 SYLNCVPSKTCTAMVISYLNCVPSKTCTAMVKSYLNCVPSKTCTAMVISYLNCVPSKTCT 95
Query: 63 APMDAYLKIVDAALC 77
A + +YL V + C
Sbjct: 96 AMVISYLNCVPSKTC 110
Score = 25.4 bits (53), Expect = 6.7
Identities = 17/75 (22%), Positives = 30/75 (40%)
Query: 3 AYLKMVDAALCEIIQSKIKSVACSASGAAPIDAYLKVVNAALCEIMQSKIKSVACSASGA 62
+YL V + C + + S + A + +YL V + C M + S +
Sbjct: 52 SYLNCVPSKTCTAMVKSYLNCVPSKTCTAMVISYLNCVPSKTCTAMVISYLNCVPSKTCT 111
Query: 63 APMDAYLKIVDAALC 77
A + +YL V + C
Sbjct: 112 AMVISYLNCVPSKTC 126
>SB_56257| Best HMM Match : Extensin_2 (HMM E-Value=4.5)
Length = 304
Score = 25.8 bits (54), Expect = 5.0
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 1 MDAYLKMVDAALCEIIQSKIKSVACSASGAAPIDAYLKVVNAALCEIMQSKIKSVACSAS 60
MDAY +DA L + V A P+DA V+A + +
Sbjct: 216 MDAY--PMDAYLMDAYPMDACPVDAYPMDAYPMDAC--PVDAYPMDAYPMDACPMDAYTM 271
Query: 61 GAAPMDAYLKIVDAAL 76
A PMDAYLK +D L
Sbjct: 272 NACPMDAYLKAIDKLL 287
>SB_39821| Best HMM Match : Fun_ATP-synt_8 (HMM E-Value=3.1)
Length = 213
Score = 25.4 bits (53), Expect = 6.7
Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 2 DAYLKMVDAAL-CEIIQSKIKSVACSASGAAPIDAYLKVVNAALCEIMQSKIKSVACSAS 60
DA + ++ L C I+ S+ +A S + + Y + C I+ + +A S
Sbjct: 26 DAQYRYIEVPLYCHIVISRFHCIAISLYRGSSVLPYRYIEVPLYCRIVIWRFHCIAISLY 85
Query: 61 GAAPMDAYLKIVDAALCEIIQSK 83
+ + +Y I C I+ S+
Sbjct: 86 RGSTVLSYRYIEVLLYCRIVISR 108
>SB_36759| Best HMM Match : Tryp_alpha_amyl (HMM E-Value=3.6)
Length = 357
Score = 25.4 bits (53), Expect = 6.7
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 8 VDAAL-CEIIQSKIKSVACSASGAAPIDAYLKVVNAALCEIMQSKIKSVACSASGAAPMD 66
+D L C I+ S+ +A S + + Y + C I+ S+ +A S+ + +
Sbjct: 256 IDVPLYCRIVISRFHCIAISLYRGSTVLPYRYIEVPLYCRIVISRFHCIAVSSYRGSTVL 315
Query: 67 AYLKIVDAALCEIIQS 82
Y I C I+ S
Sbjct: 316 PYRYIEVPLYCRIVIS 331
>SB_35974| Best HMM Match : PUF (HMM E-Value=0.00065)
Length = 422
Score = 25.4 bits (53), Expect = 6.7
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 11 ALCEIIQSKIKSVACSASGAAPIDAYLK 38
+L + Q ++ V+C+A G+ I+AY+K
Sbjct: 288 SLLHLSQDELVLVSCNAMGSHVIEAYMK 315
Score = 25.0 bits (52), Expect = 8.8
Identities = 10/35 (28%), Positives = 22/35 (62%)
Query: 36 YLKVVNAALCEIMQSKIKSVACSASGAAPMDAYLK 70
++ V +L + Q ++ V+C+A G+ ++AY+K
Sbjct: 281 HVAVFADSLLHLSQDELVLVSCNAMGSHVIEAYMK 315
>SB_21138| Best HMM Match : PAN (HMM E-Value=0.18)
Length = 84
Score = 25.4 bits (53), Expect = 6.7
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 44 LCEIMQSKIKSVACSASGAAPMDAYLK 70
+CE+++ +K AC+A D Y K
Sbjct: 54 MCELLEDGVKGEACTAEFTQESDHYYK 80
Score = 25.0 bits (52), Expect = 8.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 12 LCEIIQSKIKSVACSASGAAPIDAYLK 38
+CE+++ +K AC+A D Y K
Sbjct: 54 MCELLEDGVKGEACTAEFTQESDHYYK 80
>SB_1731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 25.4 bits (53), Expect = 6.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 5 LKMVDAALCEIIQSKIKSVACSASGAAPIDAYLKVVNAALCEI 47
L V +C +Q +I++V S A L+ +NAA C++
Sbjct: 41 LTAVAFIICAFLQIRIQTVGAGPSLPPAGHASLEFINAAPCDV 83
>SB_47901| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 420
Score = 25.0 bits (52), Expect = 8.8
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 24 ACSASGAAPIDAYLKVVNAALCEIMQSKIKSVACSASGAAPMD 66
A GAA ++ Y + A C + +++ V +A+G+ ++
Sbjct: 69 AAGRGGAAEVEEYFGGLGAVPCGLRGEELEEVMAAAAGSGSVE 111
>SB_39808| Best HMM Match : EGF_CA (HMM E-Value=6.3e-35)
Length = 850
Score = 25.0 bits (52), Expect = 8.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 53 KSVACSASGAAPMDAYLKIVDAALCEI 79
+ VA + +GAA A LK+ D CEI
Sbjct: 225 RCVASNPAGAATRSAVLKVQDLNECEI 251
>SB_31062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 25.0 bits (52), Expect = 8.8
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 24 ACSASGAAPIDAYLKVVNAALCEIMQSKIKSVACSASGAAPMD 66
A GAA ++ Y + A C + +++ V +A+G+ ++
Sbjct: 47 AAGRGGAAEVEEYFGGLGAVPCGLRGEELEEVMAAAAGSGSVE 89
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.128 0.354
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,114,783
Number of Sequences: 59808
Number of extensions: 57180
Number of successful extensions: 173
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 128
Number of HSP's gapped (non-prelim): 42
length of query: 84
length of database: 16,821,457
effective HSP length: 61
effective length of query: 23
effective length of database: 13,173,169
effective search space: 302982887
effective search space used: 302982887
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 52 (25.0 bits)
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