GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000967-TA|BGIBMGA000967-PA|undefined
         (84 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    20   4.9  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    19   6.4  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
          protein.
          Length = 580

 Score = 19.8 bits (39), Expect = 4.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query: 15 IIQSKIKSVACSASGAAPID 34
          + ++ I +VAC    A+PID
Sbjct: 1  MFRATIVTVACLLLAASPID 20


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 19.4 bits (38), Expect = 6.4
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 6/82 (7%)

Query: 6   KMVDAALCEIIQSKIKSVACSASGAAPIDAYLKVVNAAL-CEIMQSK-IKSVACSASGAA 63
           KMV+    E+IQSK +                K  +A L C    +K +     S SG A
Sbjct: 257 KMVNQKFSELIQSKPQHARRKVLAGI---VQTKGSDAELICVTTGTKCVSGEHLSVSGGA 313

Query: 64  PMDAYLKIV-DAALCEIIQSKI 84
             D + ++V    LCE +  ++
Sbjct: 314 LNDCHAEVVARRCLCEYLYKQL 335


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.128    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,788
Number of Sequences: 429
Number of extensions: 427
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 84
length of database: 140,377
effective HSP length: 47
effective length of query: 37
effective length of database: 120,214
effective search space:  4447918
effective search space used:  4447918
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.1 bits)
S2: 37 (19.0 bits)