Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000966-TA|BGIBMGA000966-PA|IPR003591|Leucine-rich
repeat, typical subtype, IPR001611|Leucine-rich repeat
(454 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33) 87 3e-17
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 2e-12
SB_22441| Best HMM Match : LRR_1 (HMM E-Value=1.8e-19) 54 3e-07
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 1e-06
SB_51625| Best HMM Match : LRR_1 (HMM E-Value=2.7e-10) 48 1e-05
SB_19770| Best HMM Match : LRR_1 (HMM E-Value=1.7e-06) 47 3e-05
SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 39 0.010
SB_18178| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.013
SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08) 38 0.017
SB_13883| Best HMM Match : 7tm_1 (HMM E-Value=6e-08) 37 0.029
SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0) 37 0.039
SB_20569| Best HMM Match : LRR_1 (HMM E-Value=1.1e-27) 37 0.039
SB_47473| Best HMM Match : LRR_1 (HMM E-Value=2.8e-10) 36 0.068
SB_6989| Best HMM Match : LRR_1 (HMM E-Value=0.074) 34 0.21
SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.27
SB_38674| Best HMM Match : TIR (HMM E-Value=2.5e-31) 34 0.27
SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06) 33 0.36
SB_19634| Best HMM Match : LRR_1 (HMM E-Value=2.6e-17) 33 0.63
SB_35110| Best HMM Match : LRR_1 (HMM E-Value=3.9e-09) 32 0.83
SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21) 32 1.1
SB_29929| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 31 2.5
SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12) 30 3.4
SB_47919| Best HMM Match : Uricase (HMM E-Value=8.2e-35) 30 4.5
SB_39646| Best HMM Match : Uricase (HMM E-Value=0.00041) 30 4.5
SB_20680| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.5
SB_6826| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.5
SB_52308| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_30318| Best HMM Match : 7tm_1 (HMM E-Value=3.9e-07) 29 5.9
SB_20522| Best HMM Match : UPF0060 (HMM E-Value=0.051) 29 7.8
>SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33)
Length = 1065
Score = 87.0 bits (206), Expect = 3e-17
Identities = 69/322 (21%), Positives = 150/322 (46%), Gaps = 10/322 (3%)
Query: 100 SQVVCNSAALRGVPSGLSPSVTQLSLSRADLRVLRSDAFAHLRQLRRLALDACNLTRIRP 159
++ +C A +P GLS ++ L++SR+ L++L++ +F + L+ L L +++ I+
Sbjct: 52 TKAICFGATT-DIPKGLSKNLGDLTVSRSPLKLLKNTSFQDYQYLKWLDLSNNDISDIQD 110
Query: 160 FAFRGLPRLRELYIQHTPLATVDSFAFAALQNITSIVLTHNRIAQIESYAFAGTNFINLI 219
F L L++L + + TV + F L ++ + L N + + F + +
Sbjct: 111 GTFENLRYLKQLNLGENKIRTVSASMFKGLVSLEKLDLRFNDLKALPRGVFKPLKSLREL 170
Query: 220 SLRNNPI--KRILVHAFSGLNDVGQIELPS-GIRTIEPQAFAGLEGIGVLELAFMDLPSL 276
L +N RI AF+GL+++ ++ + + G++ I F L + L+++F ++
Sbjct: 171 FLHDNRNMGSRIEEGAFNGLDNLRKLHVSATGMKKITQGTFGSLMSLEFLDVSFNEIRHF 230
Query: 277 LPDTFHGLIRVGRLSLRESDLGIIKVGSFDGLQHVDTLEICNNKIDGIEELSLVQNNSVR 336
++ L + L + + L + + + ++ + L++ N I + + N+ ++
Sbjct: 231 DEESLACLPLLEVLHINNNSLTTVPLHALRKVKFLKELDLSANLISYVSSTAFANNSKLQ 290
Query: 337 VFKLTGNHMLESPEAVVLEVENI---IIRGNHLPCECGRDPFTNPLALSQ---DFAEENY 390
L N + E +++ + +RGN C+C + F L +Q +F Y
Sbjct: 291 KLLLHNNTIRLIHEDAFSQLKGLRALFLRGNPFQCDCQLNGFHAWLRNNQYLVNFNGHMY 350
Query: 391 CISPLKVRGRSLASATSGSAGC 412
C++P K+ GR L +S C
Sbjct: 351 CMTPDKLTGRDLLELSSSDLKC 372
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 70.9 bits (166), Expect = 2e-12
Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 1/214 (0%)
Query: 107 AALRGVPSGLSPSVTQLSLSRADLRVLRSDAFAHLRQLRRLALDACNLTRIRPFAFRGLP 166
+ LR VP V+ LSL + + S+AF +L LR L L A L+ + FR L
Sbjct: 57 SGLRHVPRNFPMQVSLLSLYNNLISTIHSNAFRNLTALRSLNLGANRLSVLPRSVFRDLA 116
Query: 167 RLRELYIQHTPLATVDSFAFAALQNITSIVLTHNRIAQIESYAFAGTNFINLISLRNNPI 226
LR L + L+++ F L ++ + L NR+ I F G + + L NN +
Sbjct: 117 SLRSLDLSANRLSSLPEDTFEGLSSLQDLFLDFNRLRAIPETTFHGLAALQRLRLHNNNL 176
Query: 227 KRILVHAFSGLNDVGQIELPSGIRT-IEPQAFAGLEGIGVLELAFMDLPSLLPDTFHGLI 285
K G + ++L + + T IEP F L G+ +L L ++ L F
Sbjct: 177 KTFSERTLQGTLSLKSLQLNNNLLTRIEPGTFRNLRGLEILYLNNNNITELDQRLFTRTP 236
Query: 286 RVGRLSLRESDLGIIKVGSFDGLQHVDTLEICNN 319
+ L + + L + G F L + + NN
Sbjct: 237 SLKLLFVSFNSLATLPRGLFYSLSTDAKVSLHNN 270
Score = 57.6 bits (133), Expect = 2e-08
Identities = 44/204 (21%), Positives = 90/204 (44%), Gaps = 4/204 (1%)
Query: 171 LYIQHTPLATVDSFAFAALQNITSIVLTHNRIAQIESYAFAGTNFINLISLRNNPIKRIL 230
L + + ++T+ S AF L + S+ L NR++ + F + + L N + +
Sbjct: 73 LSLYNNLISTIHSNAFRNLTALRSLNLGANRLSVLPRSVFRDLASLRSLDLSANRLSSLP 132
Query: 231 VHAFSGLNDVGQIELP-SGIRTIEPQAFAGLEGIGVLELAFMDLPSLLPDTFHGLIRVGR 289
F GL+ + + L + +R I F GL + L L +L + T G + +
Sbjct: 133 EDTFEGLSSLQDLFLDFNRLRAIPETTFHGLAALQRLRLHNNNLKTFSERTLQGTLSLKS 192
Query: 290 LSLRESDLGIIKVGSFDGLQHVDTLEICNNKIDGIEELSLVQNNSVRVFKLTGNHMLESP 349
L L + L I+ G+F L+ ++ L + NN I +++ + S+++ ++ N + P
Sbjct: 193 LQLNNNLLTRIEPGTFRNLRGLEILYLNNNNITELDQRLFTRTPSLKLLFVSFNSLATLP 252
Query: 350 EAVVLEVE---NIIIRGNHLPCEC 370
+ + + + N C+C
Sbjct: 253 RGLFYSLSTDAKVSLHNNPFVCDC 276
Score = 52.0 bits (119), Expect = 1e-06
Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 1/157 (0%)
Query: 192 ITSIVLTHNRIAQIESYAFAGTNFINLISLRNNPIKRILVHAFSGLNDVGQIELPSG-IR 250
++ + L +N I+ I S AF + ++L N + + F L + ++L + +
Sbjct: 70 VSLLSLYNNLISTIHSNAFRNLTALRSLNLGANRLSVLPRSVFRDLASLRSLDLSANRLS 129
Query: 251 TIEPQAFAGLEGIGVLELAFMDLPSLLPDTFHGLIRVGRLSLRESDLGIIKVGSFDGLQH 310
++ F GL + L L F L ++ TFHGL + RL L ++L + G
Sbjct: 130 SLPEDTFEGLSSLQDLFLDFNRLRAIPETTFHGLAALQRLRLHNNNLKTFSERTLQGTLS 189
Query: 311 VDTLEICNNKIDGIEELSLVQNNSVRVFKLTGNHMLE 347
+ +L++ NN + IE + + + L N++ E
Sbjct: 190 LKSLQLNNNLLTRIEPGTFRNLRGLEILYLNNNNITE 226
Score = 43.2 bits (97), Expect = 4e-04
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 109 LRGVPS----GLSPSVTQLSLSRADLRVLRSDAFAHLRQLRRLALDACNLTRIRPFAFRG 164
LR +P GL+ ++ +L L +L+ L+ L L+ LTRI P FR
Sbjct: 152 LRAIPETTFHGLA-ALQRLRLHNNNLKTFSERTLQGTLSLKSLQLNNNLLTRIEPGTFRN 210
Query: 165 LPRLRELYIQHTPLATVDSFAFAALQNITSIVLTHNRIAQIESYAFAGTNFINLISLRNN 224
L L LY+ + + +D F ++ + ++ N +A + F + +SL NN
Sbjct: 211 LRGLEILYLNNNNITELDQRLFTRTPSLKLLFVSFNSLATLPRGLFYSLSTDAKVSLHNN 270
Query: 225 P 225
P
Sbjct: 271 P 271
>SB_22441| Best HMM Match : LRR_1 (HMM E-Value=1.8e-19)
Length = 261
Score = 53.6 bits (123), Expect = 3e-07
Identities = 46/215 (21%), Positives = 92/215 (42%), Gaps = 2/215 (0%)
Query: 104 CNSAALRGVPSGLSPSVTQLSLSRADLRVLRSDAFAHLRQLRRLALDACNLTRIRPFAFR 163
CN L +P+ ++ +L S + L +FA L+ L+++ + I F
Sbjct: 46 CNYPTLTAIPTTFPSTLGKLRASYNRITNLTRSSFAGYPYLKWLSVENNFMEVIENGTFL 105
Query: 164 GLPRLRELYIQHTPLATVDSFAFAALQNITSIVLTHNRIAQIESYAFAGTNFINLISLRN 223
L ELY+ + L + L+++ + L+ N I ++ AF + + ++ L +
Sbjct: 106 RQALLDELYLGYNKLERITRGTLEGLRDLQRLRLSKNTITRLYKGAFESLHMLTVLELAD 165
Query: 224 NPIKRILVHAFSGLNDVGQIELPSG-IRTIEPQAFAGLEGIGVLELAFMDLPSLLPDTFH 282
N I+ I V AF GL + + L I+ L + + +++F + + +F
Sbjct: 166 NEIEFIDVGAFGGLFSLRTLFLGGNLIKFFSSSTLGNLPSLTLFDISFNKIEEIEEGSFL 225
Query: 283 GLIRVGRLSLRESDLGIIKVGS-FDGLQHVDTLEI 316
L + L + + + I F GL+ + L+I
Sbjct: 226 ELPNLSTLHMNDCKIRKIPAREPFKGLRKLKELDI 260
Score = 50.0 bits (114), Expect = 4e-06
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 5/165 (3%)
Query: 198 THNRIAQIESYAFAGTNFINLISLRNNPIKRILVHAFSGLNDVGQIELPSGIRTIEPQAF 257
++NRI + +FAG ++ +S+ NN ++ I F L EL G +E
Sbjct: 68 SYNRITNLTRSSFAGYPYLKWLSVENNFMEVIENGTF--LRQALLDELYLGYNKLERITR 125
Query: 258 AGLEGIGVLE---LAFMDLPSLLPDTFHGLIRVGRLSLRESDLGIIKVGSFDGLQHVDTL 314
LEG+ L+ L+ + L F L + L L ++++ I VG+F GL + TL
Sbjct: 126 GTLEGLRDLQRLRLSKNTITRLYKGAFESLHMLTVLELADNEIEFIDVGAFGGLFSLRTL 185
Query: 315 EICNNKIDGIEELSLVQNNSVRVFKLTGNHMLESPEAVVLEVENI 359
+ N I +L S+ +F ++ N + E E LE+ N+
Sbjct: 186 FLGGNLIKFFSSSTLGNLPSLTLFDISFNKIEEIEEGSFLELPNL 230
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 51.6 bits (118), Expect = 1e-06
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 5/154 (3%)
Query: 119 SVTQLSLSRADLRVLRSDAFAHLRQLRRLALDACNLTRIRPFAFRGLPRLRELYIQHTPL 178
++ +L LSR + + AF L L L L ++ IR AF G +L++L ++ L
Sbjct: 86 ALKELDLSRNFFTSILASAFNRLSSLEVLKLSKNRISTIRG-AFWGQNKLQQLNLERNRL 144
Query: 179 ATVDSFAFAALQNITSIVLTHNRIAQIESYAFAGTNFINLISLRNNPIKRILVH---AFS 235
+ + F L + + L +NRI I +F+ + + L NN I + F
Sbjct: 145 SHIQDTTFKHLLALKVLNLANNRIYHISQGSFSDLRSLEGLDLSNNDISWTVEEMNGPFR 204
Query: 236 GLNDVGQIELPSG-IRTIEPQAFAGLEGIGVLEL 268
GL ++ + L I I AF GLE I L L
Sbjct: 205 GLTNLASLRLDGNRITAIAATAFLGLENIKYLWL 238
Score = 48.8 bits (111), Expect = 9e-06
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 191 NITSIVLTHNRIAQIESYAFAGTNFINLISLRNNPIKRILVHAFSGLNDVGQIELPSG-I 249
+IT++ L +N I ++ + + L N IL AF+ L+ + ++L I
Sbjct: 62 DITALNLGYNNIVDLDPKQLLKFTALKELDLSRNFFTSILASAFNRLSSLEVLKLSKNRI 121
Query: 250 RTIEPQAFAGLEGIGVLELAFMDLPSLLPDTFHGLIRVGRLSLRESDLGIIKVGSFDGLQ 309
TI AF G + L L L + TF L+ + L+L + + I GSF L+
Sbjct: 122 STIR-GAFWGQNKLQQLNLERNRLSHIQDTTFKHLLALKVLNLANNRIYHISQGSFSDLR 180
Query: 310 HVDTLEICNNKID-GIEELS--LVQNNSVRVFKLTGNHMLESPEAVVLEVENI---IIRG 363
++ L++ NN I +EE++ ++ +L GN + L +ENI +
Sbjct: 181 SLEGLDLSNNDISWTVEEMNGPFRGLTNLASLRLDGNRITAIAATAFLGLENIKYLWLNT 240
Query: 364 NHLPCEC 370
+ L C+C
Sbjct: 241 SQLMCDC 247
Score = 42.7 bits (96), Expect = 6e-04
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 5/166 (3%)
Query: 153 NLTRIRPFAFRGLPRLRELYIQHTPLATVDSFAFAALQNITSIVLTHNRIAQIESYAFAG 212
N+ + P L+EL + ++ + AF L ++ + L+ NRI+ I AF G
Sbjct: 72 NIVDLDPKQLLKFTALKELDLSRNFFTSILASAFNRLSSLEVLKLSKNRISTIRG-AFWG 130
Query: 213 TNFINLISLRNNPIKRILVHAFSGLNDVGQIELPSG-IRTIEPQAFAGLEGIGVLELAFM 271
N + ++L N + I F L + + L + I I +F+ L + L+L+
Sbjct: 131 QNKLQQLNLERNRLSHIQDTTFKHLLALKVLNLANNRIYHISQGSFSDLRSLEGLDLSNN 190
Query: 272 DLPSLLPD---TFHGLIRVGRLSLRESDLGIIKVGSFDGLQHVDTL 314
D+ + + F GL + L L + + I +F GL+++ L
Sbjct: 191 DISWTVEEMNGPFRGLTNLASLRLDGNRITAIAATAFLGLENIKYL 236
Score = 39.5 bits (88), Expect = 0.006
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Query: 107 AALRGVPSGLSPSVTQLSLSRADLRVLRSDAFAHLRQLRRLALDACNLTRIRPFAFRGLP 166
+ +RG G + + QL+L R L ++ F HL L+ L L + I +F L
Sbjct: 122 STIRGAFWGQN-KLQQLNLERNRLSHIQDTTFKHLLALKVLNLANNRIYHISQGSFSDLR 180
Query: 167 RLRELYIQHTPLA-TVDSF--AFAALQNITSIVLTHNRIAQIESYAFAGTNFINLISLRN 223
L L + + ++ TV+ F L N+ S+ L NRI I + AF G I + L
Sbjct: 181 SLEGLDLSNNDISWTVEEMNGPFRGLTNLASLRLDGNRITAIAATAFLGLENIKYLWLNT 240
Query: 224 NPI 226
+ +
Sbjct: 241 SQL 243
>SB_51625| Best HMM Match : LRR_1 (HMM E-Value=2.7e-10)
Length = 212
Score = 48.4 bits (110), Expect = 1e-05
Identities = 34/111 (30%), Positives = 46/111 (41%)
Query: 102 VVCNSAALRGVPSGLSPSVTQLSLSRADLRVLRSDAFAHLRQLRRLALDACNLTRIRPFA 161
V C LR P L P + L L+ L +LR D F L +R L L + I A
Sbjct: 95 VNCTGRRLRNFPLPLPPRTSTLLLNDNRLSLLRYDFFLGLNNIRTLNLRRNGIKEIEFGA 154
Query: 162 FRGLPRLRELYIQHTPLATVDSFAFAALQNITSIVLTHNRIAQIESYAFAG 212
FR L L LY+ + AF L + + L NR+ + F+G
Sbjct: 155 FRNLTALESLYLFRNRFFGIGPNAFERLTALQVLSLVDNRLTGLTRSMFSG 205
Score = 40.7 bits (91), Expect = 0.002
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 193 TSIVLTHNRIAQIESYAFAGTNFINLISLRNNPIKRILVHAFSGLNDVGQIEL-PSGIRT 251
++++L NR++ + F G N I ++LR N IK I AF L + + L +
Sbjct: 114 STLLLNDNRLSLLRYDFFLGLNNIRTLNLRRNGIKEIEFGAFRNLTALESLYLFRNRFFG 173
Query: 252 IEPQAFAGLEGIGVLELAFMDLPSLLPDTFHGL 284
I P AF L + VL L L L F GL
Sbjct: 174 IGPNAFERLTALQVLSLVDNRLTGLTRSMFSGL 206
Score = 37.5 bits (83), Expect = 0.022
Identities = 26/94 (27%), Positives = 44/94 (46%)
Query: 147 LALDACNLTRIRPFAFRGLPRLRELYIQHTPLATVDSFAFAALQNITSIVLTHNRIAQIE 206
L L+ L+ +R F GL +R L ++ + ++ AF L + S+ L NR I
Sbjct: 116 LLLNDNRLSLLRYDFFLGLNNIRTLNLRRNGIKEIEFGAFRNLTALESLYLFRNRFFGIG 175
Query: 207 SYAFAGTNFINLISLRNNPIKRILVHAFSGLNDV 240
AF + ++SL +N + + FSGL +
Sbjct: 176 PNAFERLTALQVLSLVDNRLTGLTRSMFSGLKSL 209
Score = 33.9 bits (74), Expect = 0.27
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 1/113 (0%)
Query: 152 CNLTRIRPFAFRGLPRLRELYIQHTPLATVDSFAFAALQNITSIVLTHNRIAQIESYAFA 211
C R+R F PR L + L+ + F L NI ++ L N I +IE AF
Sbjct: 97 CTGRRLRNFPLPLPPRTSTLLLNDNRLSLLRYDFFLGLNNIRTLNLRRNGIKEIEFGAFR 156
Query: 212 GTNFINLISLRNNPIKRILVHAFSGLNDVGQIELPSGIRT-IEPQAFAGLEGI 263
+ + L N I +AF L + + L T + F+GL+ +
Sbjct: 157 NLTALESLYLFRNRFFGIGPNAFERLTALQVLSLVDNRLTGLTRSMFSGLKSL 209
>SB_19770| Best HMM Match : LRR_1 (HMM E-Value=1.7e-06)
Length = 239
Score = 47.2 bits (107), Expect = 3e-05
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
Query: 95 ICLSQSQ-VVCNSAALRGVPSGLSPSVTQLSLSRADLRVLRSDAFAHLRQLRRLALDACN 153
+C S + V+C+S L +P+ + +V L + + L+ +F L +LR L L
Sbjct: 23 LCTSNGRSVICSSGRLDDIPANIPRTVGTLIVEDGQITELKKTSFLDLTKLRGLYLTNNK 82
Query: 154 LTRIRPFAFRGLPRLRELYIQHTPLATVDSFAFAALQNITSIVLTHNRIAQIESYAFAGT 213
++ I RL + + L V F+ L+++ S+ L+ N I +E AF G
Sbjct: 83 ISPIFEGTITTCVRLMTVDLSRNLLKRVFKHYFSGLEDLKSVNLSRNVIECVEREAFEGC 142
Query: 214 NFINLISLRNN 224
++ + N
Sbjct: 143 KALSKVDFSGN 153
Score = 40.7 bits (91), Expect = 0.002
Identities = 23/111 (20%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 142 RQLRRLALDACNLTRIRPFAFRGLPRLRELYIQHTPLATVDSFAFAALQNITSIVLTHNR 201
R + L ++ +T ++ +F L +LR LY+ + ++ + + ++ L+ N
Sbjct: 47 RTVGTLIVEDGQITELKKTSFLDLTKLRGLYLTNNKISPIFEGTITTCVRLMTVDLSRNL 106
Query: 202 IAQIESYAFAGTNFINLISLRNNPIKRILVHAFSGLNDVGQIELPSGIRTI 252
+ ++ + F+G + ++L N I+ + AF G + +++ SG R I
Sbjct: 107 LKRVFKHYFSGLEDLKSVNLSRNVIECVEREAFEGCKALSKVDF-SGNRLI 156
>SB_26267| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 2996
Score = 38.7 bits (86), Expect = 0.010
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 1/132 (0%)
Query: 114 SGLSPSVTQLSLSRADLRVLRSDAFAHLRQLRRLALDACNLTRIRPFAFRGLPRLRELYI 173
SG S+ L LS ++R L+ DAFA L ++ L L + L L L +
Sbjct: 588 SGSGSSIRILDLSYNEIRTLKEDAFAGLSSSYKVMLRNNKLIQSPLIPLAHL-NLVVLDL 646
Query: 174 QHTPLATVDSFAFAALQNITSIVLTHNRIAQIESYAFAGTNFINLISLRNNPIKRILVHA 233
Q + T++ + + L +N I ++ F + +++ NN I+ + A
Sbjct: 647 QFNQIPTINVGELNVFTGLRDLFLQNNNITELGKDLFKYNTVLGTLNIDNNAIQVVHEGA 706
Query: 234 FSGLNDVGQIEL 245
F+ D+ + L
Sbjct: 707 FNDARDLDFVYL 718
Score = 36.3 bits (80), Expect = 0.051
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 266 LELAFMDLPSLLPDTFHGLIRVGRLSLRESDLGIIKVGSFDGLQHVDTLEICNNKIDGIE 325
LE L S+ D FH L + + L E++L I FD L +++ + + NN+ID I
Sbjct: 91 LEFIKTSLSSIADDVFHNLTALEKFILIENELDWIPDNWFD-LPNLEYMSVDNNQIDRIS 149
Query: 326 ELSL---VQNNSVRVFKLTGNHMLES 348
+L QN S V N+ +ES
Sbjct: 150 YPNLEPFFQNRSQLVHLNLSNNAIES 175
Score = 33.9 bits (74), Expect = 0.27
Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Query: 168 LRELYIQHTPLATVDSFAFA---ALQNITSIVLTHNRIAQIESYAFAGTNFINLISLRNN 224
L L++Q+ + + S F + +I + L++N I ++ AFAG + + LRNN
Sbjct: 567 LATLHLQNNKIQAITSKIFGNSGSGSSIRILDLSYNEIRTLKEDAFAGLSSSYKVMLRNN 626
Query: 225 PIKRILVHAFSGLNDVGQIELPSGIRTIEPQAFAGLEGIGVLELAFMDLPSLLPDTFHGL 284
+ + + + LN V + I TI G+ L L ++ L D F
Sbjct: 627 KLIQSPLIPLAHLNLVVLDLQFNQIPTINVGELNVFTGLRDLFLQNNNITELGKDLFKYN 686
Query: 285 IRVGRLSLRESDLGIIKVGSFDGLQHVD 312
+G L++ + + ++ G+F+ + +D
Sbjct: 687 TVLGTLNIDNNAIQVVHEGAFNDARDLD 714
Score = 31.9 bits (69), Expect = 1.1
Identities = 21/98 (21%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 165 LPRLRELYIQHTPLATVDSFAFAALQNITSIVLTHNRIAQIESYAFAGTNFINLISLRNN 224
+P+++ +Y+++ + +++ AF N+ + L++N+I +I+ +N + L NN
Sbjct: 350 IPKVQVMYLKNNKIVAIENGAFPL--NLRVMDLSNNKIGRIDKIVLKDLVNLNSLLLNNN 407
Query: 225 PIKRILVHAFSGLN-DVGQIELPSG-IRTIEPQAFAGL 260
+ IL + N + +++L + + TI P F +
Sbjct: 408 QL-TILPNGGDFHNKQIDRLDLKNNRLTTIAPNTFVNI 444
>SB_18178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 38.3 bits (85), Expect = 0.013
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 99 QSQVVCNSAALRGVPSGLSPSVTQLSLSRADLRVLRSDAFAHLRQLRRLALDACNLTRIR 158
Q+ VVC + +P+ L + T + L + ++ L+ +F L++L L +T I
Sbjct: 417 QNTVVCYAKNTTTIPNYLPHTTTSMYLIKKRIKQLQPYSFERYGDLQKLDLRGNRITTIE 476
Query: 159 PFAFRGLPRLREL 171
PF F L L EL
Sbjct: 477 PFTFANLNSLTEL 489
Score = 31.5 bits (68), Expect = 1.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 193 TSIVLTHNRIAQIESYAFAGTNFINLISLRNNPIKRILVHAFSGLNDVGQI 243
TS+ L RI Q++ Y+F + + LR N I I F+ LN + ++
Sbjct: 439 TSMYLIKKRIKQLQPYSFERYGDLQKLDLRGNRITTIEPFTFANLNSLTEL 489
>SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08)
Length = 595
Score = 37.9 bits (84), Expect = 0.017
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 276 LLPDTFHGLIRVGRLSLRESDLGIIKVGSFDGLQHVDTLEICNNKIDGIEELSLVQNNSV 335
L PD F + V L L+ + + I G+F+GL + TL++ +N + + ++ NS+
Sbjct: 47 LEPDHFALPVAVESLILKNNSIRSIAKGAFNGLDKLLTLDLSSNGLQIWDVDPDLELNSL 106
Query: 336 RVFKLTGNHMLESPEAVVLEVENI 359
+ KL GN SP+ +L++ N+
Sbjct: 107 KTVKLYGNRNY-SPDTSILKLCNL 129
>SB_13883| Best HMM Match : 7tm_1 (HMM E-Value=6e-08)
Length = 535
Score = 37.1 bits (82), Expect = 0.029
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 153 NLTRIRPFAFRGLPRLRELYIQHTPLATVDSFAFAALQNITSIVLTHNRIAQIESYAFAG 212
NLT +R F R+ L + L + F F N+ ++ L N + +I + + +G
Sbjct: 14 NLTELRKH-FDNTDRIHSLDLSSNQLKIIPEFVFRGFSNVKNLTLADNDLEEIGNASLSG 72
Query: 213 TNFINLISLRNNPIKR 228
+ ++L NN +++
Sbjct: 73 LKSLLYLNLANNKLRK 88
Score = 37.1 bits (82), Expect = 0.029
Identities = 27/99 (27%), Positives = 43/99 (43%)
Query: 257 FAGLEGIGVLELAFMDLPSLLPDTFHGLIRVGRLSLRESDLGIIKVGSFDGLQHVDTLEI 316
F + I L+L+ L + F G V L+L ++DL I S GL+ + L +
Sbjct: 22 FDNTDRIHSLDLSSNQLKIIPEFVFRGFSNVKNLTLADNDLEEIGNASLSGLKSLLYLNL 81
Query: 317 CNNKIDGIEELSLVQNNSVRVFKLTGNHMLESPEAVVLE 355
NNK+ V + +TGN+ L S + L+
Sbjct: 82 ANNKLRKWNGNLSVNTPELETINVTGNYWLPSNNVLELK 120
Score = 29.9 bits (64), Expect = 4.5
Identities = 22/109 (20%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Query: 138 FAHLRQLRRLALDACNLTRIRPFAFRGLPRLRELYIQHTPLATVDSFAFAALQNITSIVL 197
F + ++ L L + L I F FRG ++ L + L + + + + L+++ + L
Sbjct: 22 FDNTDRIHSLDLSSNQLKIIPEFVFRGFSNVKNLTLADNDLEEIGNASLSGLKSLLYLNL 81
Query: 198 THNRIAQIESYAFAGTNFINLISLRNN---PIKRILVHAFSGLNDVGQI 243
+N++ + T + I++ N P +L + L D+G +
Sbjct: 82 ANNKLRKWNGNLSVNTPELETINVTGNYWLPSNNVLELKY--LRDIGGV 128
>SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0)
Length = 680
Score = 36.7 bits (81), Expect = 0.039
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 254 PQAFAGLEGIGVLELAFMDLPSLLPDTFHGLIRVGRLSLRESDLGIIKVGSFDGLQHVDT 313
P +F L + L+L+ L L P+ F L + L L + L + SF L +V T
Sbjct: 373 PDSFCNLSKLWFLQLSKNHLTEL-PENFGNLTSLVELRLDSNQLSSLPA-SFANLTNVKT 430
Query: 314 LEICNNKIDGIEELSLVQNNSVRVFKLTGNHM 345
L++ NK+ I + L N +R+ L GN +
Sbjct: 431 LDLYRNKLSEIPRVLLKLENLMRL-DLDGNKL 461
Score = 35.9 bits (79), Expect = 0.068
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 28/209 (13%)
Query: 164 GLPRLRELYIQHTPLATVDSFAFAALQNITSIVLTHNRIAQIESYAFAGTNFINLISLRN 223
G L L +Q P V A AL NIT++ L N + ++ + + L N
Sbjct: 17 GCLSLISLDLQELPRGFVPEVA--AL-NITTLKLDFNDLQRLPDDLGSLASLTELYLTGN 73
Query: 224 NPIKRILVHAFSGLNDVGQIELPSGIRTIEPQAFAGLEGIGVLELAFMDLPSLLPDTFHG 283
+ L F+ L ++ ++ L P++ L + VL L L L D G
Sbjct: 74 --LLTSLPDVFARLGNLTELHLNENSLEELPESLGKLSKLRVLNLTGNKLEKLRDDFGAG 131
Query: 284 LIRVGRLSLRESDLGIIKVGSFDGLQHVDTLEICNNKIDGIEE----------LSLVQNN 333
L + L + E+DL + V SF ++++ LE+ +N I+ + E ++L QNN
Sbjct: 132 LASLTELRIDENDLSELSV-SFTLMKNLKVLELGDNHIERLPEDFGNLRKLEVVNLSQNN 190
Query: 334 ------------SVRVFKLTGNHMLESPE 350
++ F +TGNH+ PE
Sbjct: 191 IEKLPESFGFLCCLKSFDITGNHIENLPE 219
Score = 29.9 bits (64), Expect = 4.5
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 3/122 (2%)
Query: 205 IESYAFAGTNFINLISLRNNPIKRILVHAFSGLNDVGQIELPSGIRTIEPQAFAGLEGIG 264
IE Y G ++LISL + R V + LN + ++L P L +
Sbjct: 8 IEDYKHQGGGCLSLISLDLQELPRGFVPEVAALN-ITTLKLDFNDLQRLPDDLGSLASLT 66
Query: 265 VLELAFMDLPSLLPDTFHGLIRVGRLSLRESDLGIIKVGSFDGLQHVDTLEICNNKIDGI 324
L L +L + LPD F L + L L E+ L + S L + L + NK++ +
Sbjct: 67 ELYLT-GNLLTSLPDVFARLGNLTELHLNENSLEELP-ESLGKLSKLRVLNLTGNKLEKL 124
Query: 325 EE 326
+
Sbjct: 125 RD 126
>SB_20569| Best HMM Match : LRR_1 (HMM E-Value=1.1e-27)
Length = 309
Score = 36.7 bits (81), Expect = 0.039
Identities = 59/248 (23%), Positives = 103/248 (41%), Gaps = 29/248 (11%)
Query: 123 LSLSRADLRVLRSDAFAHLRQLRRLALDACNLTRIRPFAFRGLPRLRELYIQHTPLATVD 182
L+LS +L V+ D+ L+ ++ L L+ N + P L RLREL + H L +
Sbjct: 50 LNLSHRELTVI-PDSLKKLKHVQILLLND-NQIIMPPVELVYLSRLRELCLDHNQLTLLP 107
Query: 183 SFAFAALQNITSIVLTHNRIA----------QIESYAFAGTNFINLIS--LRNNPIKRI- 229
S F L N+ + L+HN + Q+E T + L + R +K++
Sbjct: 108 S-GFGRLTNLKVLCLSHNNLGYLASEICELVQLEELWIINTQLMALPADICRLKLLKKLS 166
Query: 230 --------LVHAFSGLNDVGQIELPSGIRTIEPQAFAGLEGIGVLELAFMDLPSLLPDTF 281
L SGL + + L + P F L + L+L M+ P+
Sbjct: 167 AGKNMITSLPDKISGLVSLQWLSLRENHLSSLPSEFFKLPKLAHLDLN-MNKFEEFPENL 225
Query: 282 HGLIRVGRLSLRESDLGIIKVGSFDGLQHVDTLEICNNKIDGIEELSLVQNNSVRVFKLT 341
GL+ + LSLR + + + +GL + ++I +N++ + Q +R+F
Sbjct: 226 IGLVSLECLSLRGNCIKSLADNCVEGLPKLCKVDIRDNQVTLLPR----QLEKLRIFVTA 281
Query: 342 GNHMLESP 349
+H P
Sbjct: 282 QSHECGDP 289
>SB_47473| Best HMM Match : LRR_1 (HMM E-Value=2.8e-10)
Length = 658
Score = 35.9 bits (79), Expect = 0.068
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 187 AALQNITSIVLTHNRIAQIESYAFAGTNFINLISLRNNPIKRILVHAFSGLNDVGQIELP 246
++ +NIT + + + I+ I FAG + +SL N I I F+GLN + + +
Sbjct: 65 SSTENITELTVASSNISTITGGVFAGFTALRNLSLTFNNIHTIRARGFAGLNKLEYLNMS 124
Query: 247 SG-IRTIEPQAFAGLEGIGVLELA 269
I T E L + VL+++
Sbjct: 125 DNRISTWEIDRDTELRSLVVLDIS 148
Score = 33.1 bits (72), Expect = 0.48
Identities = 22/88 (25%), Positives = 42/88 (47%)
Query: 261 EGIGVLELAFMDLPSLLPDTFHGLIRVGRLSLRESDLGIIKVGSFDGLQHVDTLEICNNK 320
E I L +A ++ ++ F G + LSL +++ I+ F GL ++ L + +N+
Sbjct: 68 ENITELTVASSNISTITGGVFAGFTALRNLSLTFNNIHTIRARGFAGLNKLEYLNMSDNR 127
Query: 321 IDGIEELSLVQNNSVRVFKLTGNHMLES 348
I E + S+ V ++GN L +
Sbjct: 128 ISTWEIDRDTELRSLVVLDISGNKALSN 155
Score = 32.3 bits (70), Expect = 0.83
Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Query: 114 SGLSPSVTQLSLSRADLRVLRSDAFAHLRQLRRLALDACNLTRIRPFAFRGLPRLRELYI 173
S +V L A L ++ D + + L + + N++ I F G LR L +
Sbjct: 41 SAQETNVVALCYRSASLDEIKKD-ISSTENITELTVASSNISTITGGVFAGFTALRNLSL 99
Query: 174 QHTPLATVDSFAFAALQNITSIVLTHNRIAQIE 206
+ T+ + FA L + + ++ NRI+ E
Sbjct: 100 TFNNIHTIRARGFAGLNKLEYLNMSDNRISTWE 132
>SB_6989| Best HMM Match : LRR_1 (HMM E-Value=0.074)
Length = 180
Score = 34.3 bits (75), Expect = 0.21
Identities = 21/70 (30%), Positives = 32/70 (45%)
Query: 102 VVCNSAALRGVPSGLSPSVTQLSLSRADLRVLRSDAFAHLRQLRRLALDACNLTRIRPFA 161
+ C+ A +P+ + T+L SR + L +AF L L + L + RI A
Sbjct: 111 IECSRANFTVLPNDIPVETTELYFSRTQISNLVENAFQQLPNLEIMRLPENGIKRISVNA 170
Query: 162 FRGLPRLREL 171
F+GL L L
Sbjct: 171 FKGLKSLTTL 180
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 193 TSIVLTHNRIAQIESYAFAGTNFINLISLRNNPIKRILVHAFSGLNDV 240
T + + +I+ + AF + ++ L N IKRI V+AF GL +
Sbjct: 130 TELYFSRTQISNLVENAFQQLPNLEIMRLPENGIKRISVNAFKGLKSL 177
>SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 33.9 bits (74), Expect = 0.27
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 308 LQHVDTLEICNNKIDGIEELSLVQNNSVRVFKLTGNHMLESPEAVVLE--VENIIIRGNH 365
LQH++ L + N + + E + +++ L NH+ E PE + ++N+++ GN+
Sbjct: 39 LQHLEFLYLEGNYLTTLPETLFERLPNLKWLDLRNNHINEVPENLGAHRCLKNLLLEGNN 98
Query: 366 ---LPCECGRDPFTNPLALSQDFAEENYCISPLKVR 398
LP E G T P Q E C+SP KVR
Sbjct: 99 IRTLPFELGA---TVP--DQQPIVTEYECLSPEKVR 129
>SB_38674| Best HMM Match : TIR (HMM E-Value=2.5e-31)
Length = 870
Score = 33.9 bits (74), Expect = 0.27
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 18/178 (10%)
Query: 195 IVLTHNRIAQIESYAFAGTNFINLISLRNNPIKRILVHAFSGLNDVGQIELPSG-IRTIE 253
+VL +N+I + Y F G + +S++ N ++ I FS L+ V I+L + IR
Sbjct: 266 LVLDYNQIRNLSQYPFTG--HLQKLSIKGNGLRVIGGSCFSNLSGVNIIDLSNNEIRDFP 323
Query: 254 PQAFAGLEGIGVLELAFMDLPSLLPDTFHGLIRV-GRLSLRESDLGIIKVGSFDGLQHVD 312
Q F + + LE A + ++ TF G++ V ++ + + + S Q
Sbjct: 324 EQLFR-VFLLRNLESADLSSNAI---TFGGILDVLDSVTADQLFYNLRRSASSSDNQLKS 379
Query: 313 TLEICNNKIDGIEELSLVQNNSVRVFKLTGNHMLESPEAVVLEVENIIIRGNHLPCEC 370
T N +GI + + N ++ KL V+L V +I +R N L C C
Sbjct: 380 TKVELNLANNGISSIDIGSLNKTQLGKL----------KVILRVYHIDLRDNPLICNC 427
>SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06)
Length = 575
Score = 33.5 bits (73), Expect = 0.36
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 213 TNFINLISLRNNPIKRILVHAFSGLNDVGQIEL-PSGIRTIEPQAFAGLEGIGVLEL 268
TN INL +L NN I I HAF GL+++ + L + I E L + +LEL
Sbjct: 128 TNLINL-TLENNSISAIAPHAFKGLDNLQSLNLRHNNISLWEGNISRDLPSLEILEL 183
Score = 31.5 bits (68), Expect = 1.5
Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 4/124 (3%)
Query: 104 CNSAALRGVPSGLSPSVTQLSLSRADLRVLRSDAFAHLRQLRRLALDACNLTRIRPFAFR 163
C+ GV SG+ ++++ L+ ++ + L A +L IR
Sbjct: 44 CSQRCYLGV-SGIQIQISEIYLTSINVTETPCECSLDTNGLLMAACKVQHLGDIRANILH 102
Query: 164 GLPRLRELYIQHTPLA-TVDSFAFAALQNITSIVLTHNRIAQIESYAFAGTNFINLISLR 222
PR + H TV S N+ ++ L +N I+ I +AF G + + ++LR
Sbjct: 103 --PRNVSSLVLHVVAGFTVPSNGLQMFTNLINLTLENNSISAIAPHAFKGLDNLQSLNLR 160
Query: 223 NNPI 226
+N I
Sbjct: 161 HNNI 164
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 168 LRELYIQHTPLATVDSFAFAALQNITSIVLTHNRIAQIESYAFAGTNFINLISLRNNPI 226
L L +++ ++ + AF L N+ S+ L HN I+ E + ++ L NP+
Sbjct: 130 LINLTLENNSISAIAPHAFKGLDNLQSLNLRHNNISLWEGNISRDLPSLEILELDGNPV 188
>SB_19634| Best HMM Match : LRR_1 (HMM E-Value=2.6e-17)
Length = 267
Score = 32.7 bits (71), Expect = 0.63
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 182 DSFAFAALQNITSIVLTHNRIAQIESYAFAGTNFINLISLRNNPIKRI 229
D F AL + + L +N+IA+++S FAG + + ++ L +N + I
Sbjct: 95 DVFNLPALVLLDELYLAYNKIAELDSKVFAGYSGLTVLDLHDNLLTSI 142
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 144 LRRLALDACNLTRIRPFAFR--GLPRLRELYIQHTPLATVDSFAFAALQNITSIVLTHNR 201
L +L L + +LT I F L L ELY+ + +A +DS FA +T + L N
Sbjct: 79 LTKLILASNSLTEISGDVFNLPALVLLDELYLAYNKIAELDSKVFAGYSGLTVLDLHDNL 138
Query: 202 IAQI 205
+ I
Sbjct: 139 LTSI 142
>SB_35110| Best HMM Match : LRR_1 (HMM E-Value=3.9e-09)
Length = 546
Score = 32.3 bits (70), Expect = 0.83
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 279 DTFHGLIRVGRLSLRESDL-GIIKVGSFDGLQHVDTLEICNNKIDGIEELSLVQNNSVRV 337
D F I + L + +++ G I + ++D H++ L++ N++ G + L+L ++R
Sbjct: 55 DAFKNFISLRELEMPLNNISGNIHLETYD-FGHLEKLDLSYNRLTGADILALGLMENLRT 113
Query: 338 FKLTGNHMLESP 349
LTGN + P
Sbjct: 114 LHLTGNEIRRLP 125
>SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21)
Length = 791
Score = 31.9 bits (69), Expect = 1.1
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Query: 254 PQAFAGLEGIGVLELAFMDLPSLLPDTFHGLIRVGRLSLRESDLGIIKVGSFDGLQHVDT 313
P L + L L F + S++ L + RLSLRE+ + I+ L H+ T
Sbjct: 215 PDVIYKLTTLTTLYLRFNRI-SVVESGIGNLKLLERLSLRENKIKILP-RVIGQLVHLVT 272
Query: 314 LEICNNKIDGIEELSLVQNNSVRVFKLTGNHMLESPEAVVLEVENI 359
L+I +N I+ + + F + GN++ E PE ++ ++N+
Sbjct: 273 LDISHNHIENLPA-------GIDEFNIEGNNIAELPEKLLSSLKNL 311
>SB_29929| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 31.1 bits (67), Expect = 1.9
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 180 TVDSFAFAALQNITSIVLTHNRIAQIESYAFAGTNFINLISLRNNPIKRILVHAFSGLND 239
T+DS + ++ I S V + + I+S + G IN S I+ I + G+
Sbjct: 88 TIDSEVYGGIRTIDSEV--YGGVRTIDSEVYGGVRTIN--SEVYGGIRTIDSEVYGGVRT 143
Query: 240 VGQIELPSGIRTIEPQAFAGLEGI 263
+ E+ G+RTI+ + + G+ I
Sbjct: 144 IDS-EVYGGVRTIDSEVYGGVRTI 166
Score = 29.1 bits (62), Expect = 7.8
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 180 TVDSFAFAALQNITSIVLTHNRIAQIESYAFAGTNFINLISLRNNPIKRILVHAFSGLND 239
T+DS + ++ I S V + + I+S + G I+ S ++ I + G+
Sbjct: 66 TIDSEVYGGVRTINSEV--YGGVRTIDSEVYGGIRTID--SEVYGGVRTIDSEVYGGVRT 121
Query: 240 VGQIELPSGIRTIEPQAFAGLEGI 263
+ E+ GIRTI+ + + G+ I
Sbjct: 122 INS-EVYGGIRTIDSEVYGGVRTI 144
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 30.7 bits (66), Expect = 2.5
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 254 PQAFAGLEGIGVLELAFMDLPSLLPDTFHGLIRVGRLSLRESDLGIIKVGSFDGLQHVDT 313
P L + L L + +L + F LI + L LR++ L + S + T
Sbjct: 97 PTGLLELTQLEYLYLKGSQISALPEEFFRKLINLVWLDLRDNQLENLP-NSIGEHGRLKT 155
Query: 314 LEICNNKIDGIEELSLVQNNSVRVFKLTGNHMLESPEAVVLE-VENI 359
L + NK+ I L L NS+ L+GN + + PE V+ E V NI
Sbjct: 156 LLLQGNKLK-ILPLELGLLNSLSAISLSGNPIEDPPEDVIKEGVTNI 201
>SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12)
Length = 1328
Score = 30.3 bits (65), Expect = 3.4
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 140 HLRQLRRLALDACNLTRIRPFAFRGLPRLRELYIQHTPLATVDSFAFAALQNITSIVLTH 199
HLR + RL L L P +P+L + + H T + + + S+ L++
Sbjct: 971 HLRNVERLDLSGNFLQDFPPLLHEAMPKLEHMNLSHNEFETF-PYCLVKCKRLKSLDLSY 1029
Query: 200 NRI 202
N++
Sbjct: 1030 NKL 1032
>SB_47919| Best HMM Match : Uricase (HMM E-Value=8.2e-35)
Length = 537
Score = 29.9 bits (64), Expect = 4.5
Identities = 19/57 (33%), Positives = 25/57 (43%)
Query: 232 HAFSGLNDVGQIELPSGIRTIEPQAFAGLEGIGVLELAFMDLPSLLPDTFHGLIRVG 288
HAF DV + S +R EP+ F GL + VL+ L D + L VG
Sbjct: 382 HAFIMTPDVQRFCEVSHVRGDEPKVFGGLRDMKVLKTTQSGFTGFLKDQYTSLPEVG 438
>SB_39646| Best HMM Match : Uricase (HMM E-Value=0.00041)
Length = 304
Score = 29.9 bits (64), Expect = 4.5
Identities = 19/57 (33%), Positives = 25/57 (43%)
Query: 232 HAFSGLNDVGQIELPSGIRTIEPQAFAGLEGIGVLELAFMDLPSLLPDTFHGLIRVG 288
HAF DV + S +R EP+ F GL + VL+ L D + L VG
Sbjct: 47 HAFIMTPDVQRFCEVSHVRGDEPKVFGGLRDMKVLKTTQSGFTGFLKDQYTSLPEVG 103
>SB_20680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 29.9 bits (64), Expect = 4.5
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 8/132 (6%)
Query: 236 GLNDVGQIELPS-GIRTIEPQAFAGLEGIGVLELAFMDLPSLLPDTFHGLIRVGRLSL-- 292
GL G I L G+ T+E Q GLE G++ L + L G+IR+ + +
Sbjct: 22 GLEQQGIIRLEQQGVITLEQQGIIGLEQQGIIRLEQQCIIGLEQQEQQGIIRLEQQCIIG 81
Query: 293 --RESDLGIIKVGSFDGLQHVDTLEICNNKIDGIEELSLVQNNSVRVFKLTGNHM--LES 348
++ +G+ + G+ L+ + + I G+E+ ++ + +L + LE
Sbjct: 82 LEQQGIIGLEQQGNI-RLEQQGIIRLEQQGITGLEQQCIIGLEQQGIIRLEQQCIIGLEQ 140
Query: 349 PEAVVLEVENII 360
+ LE + II
Sbjct: 141 QGIIGLEQQGII 152
>SB_6826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 369
Score = 29.9 bits (64), Expect = 4.5
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 12/115 (10%)
Query: 168 LRELYIQHTPLATVDSFAFAALQNITSIVLTHNRIAQIESYAFAG-TNFINL--ISLRNN 224
LREL + L TVD + N+ S+ L HN + +F G N +NL + L +N
Sbjct: 244 LRELDFPYCSLRTVDLGSGEMFLNLRSVNLEHNSLT-----SFGGLINLVNLKVLCLNHN 298
Query: 225 PIKRILV--HAFSGLNDVGQIELPSGIRTIEPQAF-AGLEGIGVLELAFMDLPSL 276
I+ I+ A S N G+ G P+ F L + VL L DL +L
Sbjct: 299 HIESIVTKPKATSPAN-AGKRSGEPGNDYANPEMFNPVLTNLEVLHLGLKDLSNL 352
>SB_52308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1407
Score = 29.5 bits (63), Expect = 5.9
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 159 PFAFRGLPRLRELYIQHTPLATVDSFAFAALQNITSIVLTHNRIAQIESYAFAGTNFINL 218
P A L L+ELY+QH + + L N+ + L HN++ + Y F +
Sbjct: 62 PPALGELVNLQELYLQHNSIELLPD-ELGNLVNLKRLGLAHNKLNDVPLY-FGKFRQLEW 119
Query: 219 ISLRNNPIKRILV 231
+++ N I+ + V
Sbjct: 120 LNISGNAIEVVPV 132
>SB_30318| Best HMM Match : 7tm_1 (HMM E-Value=3.9e-07)
Length = 546
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 149 LDACNLTRIRPFAFRGLPRLRELYIQHTPLAT 180
LD ++T+I AF GL RLR L ++H L T
Sbjct: 86 LDHNHITKIARAAFEGLVRLRLLDVRHNKLKT 117
>SB_20522| Best HMM Match : UPF0060 (HMM E-Value=0.051)
Length = 209
Score = 29.1 bits (62), Expect = 7.8
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 180 TVDSFAFAALQNITSIVLTHNRIAQIESYAFAGTNFINLISLRNNPIKRILVHAFSGLND 239
T++S + ++ I S V + + I+S + G I+ S ++ I + + G+
Sbjct: 62 TINSEVYGGVRTIDSEV--YGGVRTIDSEVYGGVRTID--SEVYGGVRTISLEVYGGVRT 117
Query: 240 VGQIELPSGIRTIEPQAFAGLEGIGV 265
+ E+ G+RTI+ + + G+ I +
Sbjct: 118 INS-EVYGGVRTIDSEVYGGVRTISL 142
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.324 0.138 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,761,043
Number of Sequences: 59808
Number of extensions: 482359
Number of successful extensions: 1240
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1131
Number of HSP's gapped (non-prelim): 109
length of query: 454
length of database: 16,821,457
effective HSP length: 84
effective length of query: 370
effective length of database: 11,797,585
effective search space: 4365106450
effective search space used: 4365106450
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 62 (29.1 bits)
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