Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000966-TA|BGIBMGA000966-PA|IPR003591|Leucine-rich
repeat, typical subtype, IPR001611|Leucine-rich repeat
(454 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 76 5e-16
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 23 5.3
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 76.2 bits (179), Expect = 5e-16
Identities = 61/242 (25%), Positives = 110/242 (45%), Gaps = 5/242 (2%)
Query: 109 LRGVPSGLSPSVTQLSLSRADLRVLRSD-----AFAHLRQLRRLALDACNLTRIRPFAFR 163
LR +P G+ + QL + L SD F L +L L L LT I F+
Sbjct: 297 LRDLPKGIFTRLEQLLVLNLAGNRLGSDRVDETTFLGLIRLIVLNLSYNMLTHIDARMFK 356
Query: 164 GLPRLRELYIQHTPLATVDSFAFAALQNITSIVLTHNRIAQIESYAFAGTNFINLISLRN 223
L L+ L +++ + ++S AF L N+ ++ L+ N++ + + F G +N ++L
Sbjct: 357 DLFFLQILDLRNNSIDRIESNAFLPLYNLHTLELSDNKLRTVGAQLFNGLFVLNRLTLSG 416
Query: 224 NPIKRILVHAFSGLNDVGQIELPSGIRTIEPQAFAGLEGIGVLELAFMDLPSLLPDTFHG 283
N I I AF +D+ +++L T P A L + L+L + + +F
Sbjct: 417 NAIASIDPLAFRNCSDLKELDLSGNELTSVPDALRDLALLKTLDLGENRISNFYNGSFRN 476
Query: 284 LIRVGRLSLRESDLGIIKVGSFDGLQHVDTLEICNNKIDGIEELSLVQNNSVRVFKLTGN 343
L ++ L L +D+G + G L ++ L + NK+ +E + +N + +L GN
Sbjct: 477 LDQLTGLRLIGNDIGNLSRGMLWDLPNLQILNLARNKVQHVERYAFERNMRLEAIRLDGN 536
Query: 344 HM 345
+
Sbjct: 537 FL 538
Score = 62.5 bits (145), Expect = 7e-12
Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 4/246 (1%)
Query: 111 GVPSGLSPSVTQLSLSRADL-RVLRSDAFAHLRQLRRLALDACNLTRIRPFAFRGLPRLR 169
G S + L LSR ++ R+ + LRQL+ L L + I A GL LR
Sbjct: 205 GDESSCRADIRILDLSRNEITRLQENSPLLDLRQLQELHLQRNAIVEIAGDALTGLTVLR 264
Query: 170 ELYIQHTPLATVDSFAFAALQNITSIVLTHNRIAQIESYAFAGTNFINLISLRNNPI--K 227
+ L ++ FA+ +++ I L +N + + F + +++L N +
Sbjct: 265 TFNASYNSLDSLPEGLFASTRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAGNRLGSD 324
Query: 228 RILVHAFSGLNDVGQIELPSGIRT-IEPQAFAGLEGIGVLELAFMDLPSLLPDTFHGLIR 286
R+ F GL + + L + T I+ + F L + +L+L + + + F L
Sbjct: 325 RVDETTFLGLIRLIVLNLSYNMLTHIDARMFKDLFFLQILDLRNNSIDRIESNAFLPLYN 384
Query: 287 VGRLSLRESDLGIIKVGSFDGLQHVDTLEICNNKIDGIEELSLVQNNSVRVFKLTGNHML 346
+ L L ++ L + F+GL ++ L + N I I+ L+ + ++ L+GN +
Sbjct: 385 LHTLELSDNKLRTVGAQLFNGLFVLNRLTLSGNAIASIDPLAFRNCSDLKELDLSGNELT 444
Query: 347 ESPEAV 352
P+A+
Sbjct: 445 SVPDAL 450
Score = 46.0 bits (104), Expect = 7e-07
Identities = 27/123 (21%), Positives = 55/123 (44%)
Query: 102 VVCNSAALRGVPSGLSPSVTQLSLSRADLRVLRSDAFAHLRQLRRLALDACNLTRIRPFA 161
V C+ + +P + T++ L LR L++ F + +R L ++ + I+
Sbjct: 778 VDCSGLGVEEIPRRIPMDATEVYLDGNVLRELQNHVFIGRKNMRVLYVNGSGIESIQNRT 837
Query: 162 FRGLPRLRELYIQHTPLATVDSFAFAALQNITSIVLTHNRIAQIESYAFAGTNFINLISL 221
F GL L+ L+++ + + F F L ++ + L +N I I + F + ++ L
Sbjct: 838 FNGLNNLQILHLEDNRIRELKGFEFERLSHLRELYLQNNLIGFIGNLTFLPLRSLEILRL 897
Query: 222 RNN 224
N
Sbjct: 898 SGN 900
Score = 46.0 bits (104), Expect = 7e-07
Identities = 27/101 (26%), Positives = 52/101 (51%)
Query: 249 IRTIEPQAFAGLEGIGVLELAFMDLPSLLPDTFHGLIRVGRLSLRESDLGIIKVGSFDGL 308
+R ++ F G + + VL + + S+ TF+GL + L L ++ + +K F+ L
Sbjct: 806 LRELQNHVFIGRKNMRVLYVNGSGIESIQNRTFNGLNNLQILHLEDNRIRELKGFEFERL 865
Query: 309 QHVDTLEICNNKIDGIEELSLVQNNSVRVFKLTGNHMLESP 349
H+ L + NN I I L+ + S+ + +L+GN ++ P
Sbjct: 866 SHLRELYLQNNLIGFIGNLTFLPLRSLEILRLSGNRLVTFP 906
Score = 41.1 bits (92), Expect = 2e-05
Identities = 24/103 (23%), Positives = 51/103 (49%)
Query: 123 LSLSRADLRVLRSDAFAHLRQLRRLALDACNLTRIRPFAFRGLPRLRELYIQHTPLATVD 182
L ++ + + +++ F L L+ L L+ + ++ F F L LRELY+Q+ + +
Sbjct: 823 LYVNGSGIESIQNRTFNGLNNLQILHLEDNRIRELKGFEFERLSHLRELYLQNNLIGFIG 882
Query: 183 SFAFAALQNITSIVLTHNRIAQIESYAFAGTNFINLISLRNNP 225
+ F L+++ + L+ NR+ + + +SL +NP
Sbjct: 883 NLTFLPLRSLEILRLSGNRLVTFPVWQVTLNARLVELSLGSNP 925
Score = 38.7 bits (86), Expect = 1e-04
Identities = 20/78 (25%), Positives = 39/78 (50%)
Query: 149 LDACNLTRIRPFAFRGLPRLRELYIQHTPLATVDSFAFAALQNITSIVLTHNRIAQIESY 208
LD L ++ F G +R LY+ + + ++ + F L N+ + L NRI +++ +
Sbjct: 801 LDGNVLRELQNHVFIGRKNMRVLYVNGSGIESIQNRTFNGLNNLQILHLEDNRIRELKGF 860
Query: 209 AFAGTNFINLISLRNNPI 226
F + + + L+NN I
Sbjct: 861 EFERLSHLRELYLQNNLI 878
Score = 29.1 bits (62), Expect = 0.081
Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 3/134 (2%)
Query: 96 CLSQSQVVCNSAALRGVPSGLSPSVTQLSLSRADLRVLR--SDAFAHLRQLRRLALDACN 153
C ++ + L VP L +L + R+ + +F +L QL L L +
Sbjct: 430 CSDLKELDLSGNELTSVPDALRDLALLKTLDLGENRISNFYNGSFRNLDQLTGLRLIGND 489
Query: 154 LTRIRPFAFRGLPRLRELYIQHTPLATVDSFAFAALQNITSIVLTHNRIAQIESYAFAGT 213
+ + LP L+ L + + V+ +AF + +I L N ++ I F
Sbjct: 490 IGNLSRGMLWDLPNLQILNLARNKVQHVERYAFERNMRLEAIRLDGNFLSDING-VFTSI 548
Query: 214 NFINLISLRNNPIK 227
+ L++L N I+
Sbjct: 549 ASLLLLNLSENHIE 562
Score = 28.7 bits (61), Expect = 0.11
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 193 TSIVLTHNRIAQIESYAFAGTNFINLISLRNNPIKRILVHAFSGLNDVGQIELPSG-IRT 251
T + L N + +++++ F G + ++ + + I+ I F+GLN++ + L IR
Sbjct: 797 TEVYLDGNVLRELQNHVFIGRKNMRVLYVNGSGIESIQNRTFNGLNNLQILHLEDNRIRE 856
Query: 252 IEPQAFAGLEGIGVLEL 268
++ F L + L L
Sbjct: 857 LKGFEFERLSHLRELYL 873
Score = 27.1 bits (57), Expect = 0.32
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 304 SFDGLQHVDTLEICNNKIDGIEELSLVQNNSVRVFKLTGNHM 345
SF GL+ + TLEI + + + SL ++++ LT N +
Sbjct: 142 SFLGLRELHTLEIVESNVQALPVNSLCSLDNLQTLNLTENRL 183
Score = 22.2 bits (45), Expect = 9.2
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 252 IEPQAFAGLEGIGVLELAFMDLPSLLPDTFHGLIRVGRLSLRE------SDLGIIKVGSF 305
+ P +F GL + LE+ ++ +L ++ L + L+L E +D+G+ + S
Sbjct: 138 LAPDSFLGLRELHTLEIVESNVQALPVNSLCSLDNLQTLNLTENRLRDINDIGLNRRDSD 197
Query: 306 DG 307
DG
Sbjct: 198 DG 199
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 23.0 bits (47), Expect = 5.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 267 ELAFMDLPSLLPDTFHGLIRVGRLSL 292
++AF DL +L+ +HG + V + SL
Sbjct: 75 DVAFSDLHALVEFIYHGEVNVHQRSL 100
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.324 0.138 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,224
Number of Sequences: 429
Number of extensions: 3839
Number of successful extensions: 32
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 11
length of query: 454
length of database: 140,377
effective HSP length: 60
effective length of query: 394
effective length of database: 114,637
effective search space: 45166978
effective search space used: 45166978
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 45 (22.2 bits)
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