Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000964-TA|BGIBMGA000964-PA|IPR011041|Soluble
quinoprotein glucose dehydrogenase, IPR006530|YD repeat, IPR001258|NHL
repeat
(1954 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g23880.1 68414.m03012 NHL repeat-containing protein contains ... 37 0.16
At1g56500.1 68414.m06497 haloacid dehalogenase-like hydrolase fa... 35 0.48
At1g70280.2 68414.m08086 NHL repeat-containing protein contains ... 35 0.63
At1g70280.1 68414.m08085 NHL repeat-containing protein contains ... 35 0.63
At2g38185.4 68415.m04692 zinc finger (C3HC4-type RING finger) fa... 34 0.83
At2g38185.2 68415.m04690 zinc finger (C3HC4-type RING finger) fa... 34 0.83
At2g38185.1 68415.m04689 zinc finger (C3HC4-type RING finger) fa... 34 0.83
At1g23890.2 68414.m03013 NHL repeat-containing protein contains ... 34 0.83
At1g23890.1 68414.m03014 NHL repeat-containing protein contains ... 34 0.83
At1g73690.1 68414.m08533 cell division protein kinase, putative ... 33 1.5
At2g37025.1 68415.m04541 pathogen-responsive DNA-binding protein... 32 3.4
At2g28880.1 68415.m03510 para-aminobenzoate (PABA) synthase fami... 32 3.4
At1g29010.1 68414.m03548 expressed protein ; expression supporte... 32 3.4
At5g14890.1 68418.m01746 NHL repeat-containing protein contains ... 31 5.9
At1g07200.1 68414.m00766 ATP-dependent Clp protease ClpB protein... 31 5.9
>At1g23880.1 68414.m03012 NHL repeat-containing protein contains
Pfam profile PF01436: NHL repeat
Length = 545
Score = 36.7 bits (81), Expect = 0.16
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 320 PDHCNGKAADSRLLTPTALTSGPDGSLYVGDF--NLVRRITPEGV 362
P H +G+ D+RL P LT G++YV D N +R+I+ GV
Sbjct: 192 PGHVDGRLRDARLNNPKGLTVDDRGNIYVADTVNNAIRKISEAGV 236
>At1g56500.1 68414.m06497 haloacid dehalogenase-like hydrolase
family protein low similarity to SP|P95649 CbbY protein
{Rhodobacter sphaeroides}; contains InterPro accession
IPR005834: Haloacid dehalogenase-like hydrolase
Length = 1055
Score = 35.1 bits (77), Expect = 0.48
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 10/105 (9%)
Query: 370 ETTQMAYQYYICISPADGYLYISDSERHQVRRVLALEKVRDPSVNSEPVVGNGDRCVPGD 429
+TT A I + P YI+DSE +R + D ++ GD +
Sbjct: 734 QTTSFAQPSGISLGPDLKEAYIADSESSSIRAL-------DLQTGGSRLLAGGDPYFSEN 786
Query: 430 DSNCGD-EGPAIKAKLAHPKGLAIAADRTMYIADGTN--IRAVDP 471
GD +G + L HP G+ A D +Y+ D N I+ +DP
Sbjct: 787 LFKFGDNDGVGAEVLLQHPLGVLCANDGQIYLTDSYNHKIKKLDP 831
>At1g70280.2 68414.m08086 NHL repeat-containing protein contains
Pfam profile PF01436: NHL repeat
Length = 509
Score = 34.7 bits (76), Expect = 0.63
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 320 PDHCNGKAADSRLLTPTALTSGPDGSLYVGDF--NLVRRITPEGVVITV 366
P H +G+ D++L P LT G++YV D N +R+I+ EG V T+
Sbjct: 130 PGHVDGRLRDAKLNHPKGLTVDDRGNIYVADTVNNAIRKIS-EGGVTTI 177
Score = 31.5 bits (68), Expect = 5.9
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 436 EGPAIKAKLAHPKGLAIAADRTMYIADGTN--IRAVDPNGI 474
+G AKL HPKGL + +Y+AD N IR + G+
Sbjct: 134 DGRLRDAKLNHPKGLTVDDRGNIYVADTVNNAIRKISEGGV 174
>At1g70280.1 68414.m08085 NHL repeat-containing protein contains
Pfam profile PF01436: NHL repeat
Length = 447
Score = 34.7 bits (76), Expect = 0.63
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 320 PDHCNGKAADSRLLTPTALTSGPDGSLYVGDF--NLVRRITPEGVVITV 366
P H +G+ D++L P LT G++YV D N +R+I+ EG V T+
Sbjct: 68 PGHVDGRLRDAKLNHPKGLTVDDRGNIYVADTVNNAIRKIS-EGGVTTI 115
Score = 31.5 bits (68), Expect = 5.9
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 436 EGPAIKAKLAHPKGLAIAADRTMYIADGTN--IRAVDPNGI 474
+G AKL HPKGL + +Y+AD N IR + G+
Sbjct: 72 DGRLRDAKLNHPKGLTVDDRGNIYVADTVNNAIRKISEGGV 112
>At2g38185.4 68415.m04692 zinc finger (C3HC4-type RING finger) family
protein contains Pfam profile PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 872
Score = 34.3 bits (75), Expect = 0.83
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 988 NDSRVLIIEFDQFKSKETLFNTDR--NLLFTISYDVAGLPLSFNPHGAGMPLNISYDRFY 1045
++SRVL I + +K N+ N+ +T+ + + L + G+P ++ D Y
Sbjct: 140 SESRVLSISHESYKGWPYYLNSGSLLNITYTVKPQGSAVQLVVDEGHQGVPQSVLNDPAY 199
Query: 1046 RINGWKW 1052
R N W W
Sbjct: 200 RYNVWSW 206
>At2g38185.2 68415.m04690 zinc finger (C3HC4-type RING finger) family
protein contains Pfam profile PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 441
Score = 34.3 bits (75), Expect = 0.83
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 988 NDSRVLIIEFDQFKSKETLFNTDR--NLLFTISYDVAGLPLSFNPHGAGMPLNISYDRFY 1045
++SRVL I + +K N+ N+ +T+ + + L + G+P ++ D Y
Sbjct: 139 SESRVLSISHESYKGWPYYLNSGSLLNITYTVKPQGSAVQLVVDEGHQGVPQSVLNDPAY 198
Query: 1046 RINGWKW 1052
R N W W
Sbjct: 199 RYNVWSW 205
>At2g38185.1 68415.m04689 zinc finger (C3HC4-type RING finger) family
protein contains Pfam profile PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 441
Score = 34.3 bits (75), Expect = 0.83
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 988 NDSRVLIIEFDQFKSKETLFNTDR--NLLFTISYDVAGLPLSFNPHGAGMPLNISYDRFY 1045
++SRVL I + +K N+ N+ +T+ + + L + G+P ++ D Y
Sbjct: 139 SESRVLSISHESYKGWPYYLNSGSLLNITYTVKPQGSAVQLVVDEGHQGVPQSVLNDPAY 198
Query: 1046 RINGWKW 1052
R N W W
Sbjct: 199 RYNVWSW 205
>At1g23890.2 68414.m03013 NHL repeat-containing protein contains
Pfam profile PF01436: NHL repeat
Length = 400
Score = 34.3 bits (75), Expect = 0.83
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 428 GDDSNCGDEGPAIKAKLAHPKGLAIAADRTMYIADGTN--IRAVDPNGIIHTL 478
GD S+ +G A ++ + P+G A+ A +Y+AD +N IR + +G + T+
Sbjct: 84 GDGSSGHVDGKAGNSRFSKPRGFAVDAKGNVYVADKSNKAIRKISSSGSVTTI 136
Score = 31.9 bits (69), Expect = 4.4
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 322 HCNGKAADSRLLTPTALTSGPDGSLYVGDFN--LVRRITPEGVVITV 366
H +GKA +SR P G++YV D + +R+I+ G V T+
Sbjct: 90 HVDGKAGNSRFSKPRGFAVDAKGNVYVADKSNKAIRKISSSGSVTTI 136
>At1g23890.1 68414.m03014 NHL repeat-containing protein contains
Pfam profile PF01436: NHL repeat
Length = 261
Score = 34.3 bits (75), Expect = 0.83
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 428 GDDSNCGDEGPAIKAKLAHPKGLAIAADRTMYIADGTN--IRAVDPNGIIHTL 478
GD S+ +G A ++ + P+G A+ A +Y+AD +N IR + +G + T+
Sbjct: 84 GDGSSGHVDGKAGNSRFSKPRGFAVDAKGNVYVADKSNKAIRKISSSGSVTTI 136
Score = 31.9 bits (69), Expect = 4.4
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 322 HCNGKAADSRLLTPTALTSGPDGSLYVGDFN--LVRRITPEGVVITV 366
H +GKA +SR P G++YV D + +R+I+ G V T+
Sbjct: 90 HVDGKAGNSRFSKPRGFAVDAKGNVYVADKSNKAIRKISSSGSVTTI 136
>At1g73690.1 68414.m08533 cell division protein kinase, putative
similar to cell division protein kinase 7 [Homo sapiens]
SWISS-PROT:P50613
Length = 398
Score = 33.5 bits (73), Expect = 1.5
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 313 LQRALDCPDHCNGKAADSRLLTPTALTSGPDGSLYVGDFNLVR 355
LQ L ++C+GK R + P L GP+G L + DF L R
Sbjct: 114 LQMILKGLEYCHGKWVLHRDMKPNNLLIGPNGQLKLADFGLAR 156
>At2g37025.1 68415.m04541 pathogen-responsive DNA-binding
protein-related contains weak similarity to BPF-1
(GI:441310) [Petroselinum crispum]
Length = 410
Score = 32.3 bits (70), Expect = 3.4
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 183 TRRIVPAALSRVHVRVEIEGSLHTQTYEAD--PDLTHVFAWSKRNVYKQKVYGQAQAKIS 240
++ VP A S++ +++ S T E D P T + +W KR KQK+ A +++
Sbjct: 171 SKETVPYAESQIVSSEKVKDSWDTNESEDDKKPLSTFIGSWIKRKNRKQKLLNTACSRLD 230
Query: 241 IGYEYSSCAS 250
E SC S
Sbjct: 231 SSRERKSCES 240
>At2g28880.1 68415.m03510 para-aminobenzoate (PABA) synthase family
protein similar to PABA synthase from Streptomyces
griseus [SP|P32483], Streptomyces pristinaespiralis
[gi:1575336]; contains Pfam profiles PF00425: chorismate
binding enzyme, PF00117: glutamine amidotransferase
class-I, PF04715: Anthranilate synthase component I, N
terminal region
Length = 919
Score = 32.3 bits (70), Expect = 3.4
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 1531 EGIREIMRSPYGHIVYDSNPYLYLPVDFCGG 1561
EG + +R I YD + LP DFCGG
Sbjct: 512 EGFLDFLRKELSSISYDEKDFEELPFDFCGG 542
>At1g29010.1 68414.m03548 expressed protein ; expression supported
by MPSS
Length = 220
Score = 32.3 bits (70), Expect = 3.4
Identities = 25/119 (21%), Positives = 52/119 (43%), Gaps = 6/119 (5%)
Query: 680 VTPDGVLNVVDQGSLHILALRHYLPSHDENGEFRIPYPPTSEIYVFNRYGQHITTKDLTS 739
+ P V SLH L + LP G ++ PP+S+ + + + + ++S
Sbjct: 101 IPPAPVFQRKHDSSLHYLPPMN-LPKQGSGGFYQFIEPPSSQTSSLDNVTKFLDEEKISS 159
Query: 740 SKTRYSFLY-SKNTSFGKLSTVTDASGNKIQLLRD----YSNVVSSIENTQDHKLELKI 793
+K + F+ + S G +T++ Q++RD +S + DH ++L++
Sbjct: 160 AKRPWHFMADTAKCSVGPSTTISSFLPANDQIIRDQDRSFSLRTERYDTVPDHGIDLRL 218
>At5g14890.1 68418.m01746 NHL repeat-containing protein contains
Pfam profile PF01436: NHL repeat
Length = 754
Score = 31.5 bits (68), Expect = 5.9
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 13/100 (13%)
Query: 378 YYICISPADGYLYISDSERHQVRRV-LALEKVRDPSVNSEPVVGNGDRCVPGDDSNCGDE 436
Y I +SP G L + DSE + ++ + L + P + S G +
Sbjct: 94 YAIEVSPNGGELIVLDSENSNIHKISMPLSRYGKPKLLSGSQEGYTGHV----------D 143
Query: 437 GPAIKAKLAHPKGLAIAADRTMYIADGTN--IRAVDPNGI 474
G +A++ P+GLA+ +Y+AD N IR + +G+
Sbjct: 144 GKLKEARMNRPRGLAMDDRGNIYVADTINMAIRKISDDGV 183
>At1g07200.1 68414.m00766 ATP-dependent Clp protease ClpB
protein-related similar to ATP-dependent Clp protease,
ATP-binding subunit ClpB (GI:24982014) [Pseudomonas
putida KT2440]; similar to ClpB protein
(SP:Q9RA63){Thermus thermophilus}
Length = 422
Score = 31.5 bits (68), Expect = 5.9
Identities = 22/78 (28%), Positives = 32/78 (41%)
Query: 1763 DVYTSVFNRSHLLPFSFVVHGDQQDVFYFVKEETWRAADDKQQLKRMQGKLNVTFHEVSE 1822
D+ SV NR+ LP S V V Y K + + +K L + L T+ + +
Sbjct: 3 DLTASVTNRTVSLPLSCVTTDFGLGVIYASKNQESKTTREKPMLVTLNSSLEHTYQKDFK 62
Query: 1823 GGRSYADVKIHGQTSIVN 1840
R K+ QT VN
Sbjct: 63 SLREILSRKVAWQTEAVN 80
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,257,100
Number of Sequences: 28952
Number of extensions: 2132503
Number of successful extensions: 4720
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 4698
Number of HSP's gapped (non-prelim): 33
length of query: 1954
length of database: 12,070,560
effective HSP length: 92
effective length of query: 1862
effective length of database: 9,406,976
effective search space: 17515789312
effective search space used: 17515789312
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 67 (31.1 bits)
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