Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000963-TA|BGIBMGA000963-PA|IPR006210|EGF,
IPR013032|EGF-like region, IPR008929|Chondroitin AC/alginate lyase,
IPR013111|EGF, extracellular
(679 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 80 4e-17
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 64 3e-12
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 24 3.0
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 24 3.0
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 24 3.0
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 80.2 bits (189), Expect = 4e-17
Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 16/110 (14%)
Query: 316 NSCPDDCSNHGSCY----LG-KCECRDGYEGHDCSKSV--CPVL-CSGHGTYAGGI---- 363
NS P C HG C +G +C+C+ G+ G C +++ C V C GT I
Sbjct: 32 NSAPSICGEHGHCVNLPGVGHRCQCQPGFTGKYCHENINDCKVNPCENGGTCVDKINAFQ 91
Query: 364 CHCSEGWKGSECDIPAHDCEPADCSGRGQCIAGL----CHCKAGWKGPKC 409
C C EGW+G+ C+I DC P C G C+ + C+CK GWKG C
Sbjct: 92 CICKEGWEGALCNINTDDCSPNPCRNNGSCVDRIADFECNCKNGWKGKTC 141
Score = 55.6 bits (128), Expect = 1e-09
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 16/107 (14%)
Query: 316 NSCP-DDCSNHGSCY----LGKCECRDGYEGHDCSKSV--C-PVLCSGHGTYAGGI---- 363
N C + C N G+C +C C++G+EG C+ + C P C +G+ I
Sbjct: 70 NDCKVNPCENGGTCVDKINAFQCICKEGWEGALCNINTDDCSPNPCRNNGSCVDRIADFE 129
Query: 364 CHCSEGWKGSECDIPAHDCEPADCSGRGQC----IAGLCHCKAGWKG 406
C+C GWKG C + C+ C G C +C C W+G
Sbjct: 130 CNCKNGWKGKTCSLKDSHCDHTTCKNGGTCQDLGKTFMCRCPPDWEG 176
Score = 46.4 bits (105), Expect = 6e-07
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 341 GHDCSKSVCPVLCSGHGTYA-----GGICHCSEGWKGSECDIPAHDCEPADCSGRGQCI- 394
G ++ P +C HG G C C G+ G C +DC+ C G C+
Sbjct: 26 GVGSGRNSAPSICGEHGHCVNLPGVGHRCQCQPGFTGKYCHENINDCKVNPCENGGTCVD 85
Query: 395 ---AGLCHCKAGWKGPKCD 410
A C CK GW+G C+
Sbjct: 86 KINAFQCICKEGWEGALCN 104
Score = 24.2 bits (50), Expect = 3.0
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Query: 384 PADCSGRGQCI--AGL---CHCKAGWKGPKCDEGEKNLLLN 419
P+ C G C+ G+ C C+ G+ G C E + +N
Sbjct: 35 PSICGEHGHCVNLPGVGHRCQCQPGFTGKYCHENINDCKVN 75
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 64.1 bits (149), Expect = 3e-12
Identities = 42/124 (33%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Query: 316 NSCPD-DCSNHGSCY--LGK--CECRDGYEGHDCSKSV--C-PVLCSGHGTYAGGI---- 363
N C C N G+C +G C+C G++G +C +V C P C GT +
Sbjct: 186 NECDSAPCQNGGTCLDLIGSYSCKCPKGFQGQNCELNVDDCKPNPCQNGGTCHDLVNSFS 245
Query: 364 CHCSEGWKGSECDIPAHDCEPADCSGRGQC---IAGL-CHCKAGWKGPKCDEGEKNLLLN 419
C C G G C+I DC P C G C + G C C G+ GP+C EG+ N L+
Sbjct: 246 CSCPSGTLGYICEINVDDCRPGACHNNGTCLDKVGGFECKCPPGFVGPRC-EGDINECLS 304
Query: 420 VLCA 423
C+
Sbjct: 305 NPCS 308
Score = 54.0 bits (124), Expect = 3e-09
Identities = 35/118 (29%), Positives = 48/118 (40%), Gaps = 19/118 (16%)
Query: 312 EGVTNSC-PDDCSNHGSCYLGK------CECRDGYEGHDCSKSV--CPVL-CSGHGT--- 358
EG N C + CSN G+ + C C+ G+ G C V C C G
Sbjct: 296 EGDINECLSNPCSNAGTLDCVQLVNDYHCNCKLGFMGRHCESKVNFCATSPCQNGGVCTT 355
Query: 359 -YAGGICHCSEGWKGSECDIPAHDCEPADCSGRGQCIAG-----LCHCKAGWKGPKCD 410
+AG C C EG+ G C+ +DC+ C G C +C C +G G C+
Sbjct: 356 IHAGHKCTCPEGFYGKNCEFSGYDCDSNPCQNGGVCRISDGGGYICDCPSGTNGTNCE 413
Score = 52.8 bits (121), Expect = 7e-09
Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 16/123 (13%)
Query: 304 VEMIVSEAEGVTNSCP-DDCSNHGSCY-LG---KCECRDGYEGHDCSKSV--CPVL-CSG 355
VEM+ + + P N+G+C +G +C C DGY G C + C C
Sbjct: 136 VEMVSCKDAALRKVVPLKKLCNNGTCEDIGNSHRCHCSDGYSGSYCQTEINECDSAPCQN 195
Query: 356 HGTYAGGI----CHCSEGWKGSECDIPAHDCEPADCSGRGQC----IAGLCHCKAGWKGP 407
GT I C C +G++G C++ DC+P C G C + C C +G G
Sbjct: 196 GGTCLDLIGSYSCKCPKGFQGQNCELNVDDCKPNPCQNGGTCHDLVNSFSCSCPSGTLGY 255
Query: 408 KCD 410
C+
Sbjct: 256 ICE 258
Score = 52.0 bits (119), Expect = 1e-08
Identities = 32/106 (30%), Positives = 42/106 (39%), Gaps = 19/106 (17%)
Query: 322 CSNHGSCYLGK----CECRDGYEGHDCSKSV--C---PVL----CSGHGTYAGGICHCSE 368
C N G+C G C C+ G+ G +C + C P L C H T+ CHC
Sbjct: 32 CMNGGTCIDGINSYICTCKPGFTGSNCQNRINLCDSSPCLNGATCQDHTTHY--TCHCPY 89
Query: 369 GWKGSECDIPAHDCEPADCSGRGQCIAG----LCHCKAGWKGPKCD 410
G+ G +C C C + C+ C C GW G CD
Sbjct: 90 GYTGKDCGEYVDWCSTNPCENQATCVQNKNQYQCLCGVGWTGKVCD 135
Score = 50.4 bits (115), Expect = 4e-08
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 17/109 (15%)
Query: 319 PDDCSNHGSCY----LGKCECRDGYEGHDCSKSV--C-PVLCSGHGTY---AGGI-CHCS 367
P+ C N G+C+ C C G G+ C +V C P C +GT GG C C
Sbjct: 228 PNPCQNGGTCHDLVNSFSCSCPSGTLGYICEINVDDCRPGACHNNGTCLDKVGGFECKCP 287
Query: 368 EGWKGSECDIPAHDCEPADCSGRG--QCIAGL----CHCKAGWKGPKCD 410
G+ G C+ ++C CS G C+ + C+CK G+ G C+
Sbjct: 288 PGFVGPRCEGDINECLSNPCSNAGTLDCVQLVNDYHCNCKLGFMGRHCE 336
Score = 43.2 bits (97), Expect = 6e-06
Identities = 26/90 (28%), Positives = 34/90 (37%), Gaps = 11/90 (12%)
Query: 333 CECRDGYEGHDCS---KSVCPVLCSGHGTYAGGI----CHCSEGWKGSECDIPAHDCEPA 385
C C G+ G +C + C GT GI C C G+ GS C + C+ +
Sbjct: 9 CTCPLGFSGINCQTNDEDCTETSCMNGGTCIDGINSYICTCKPGFTGSNCQNRINLCDSS 68
Query: 386 DCSGRGQC----IAGLCHCKAGWKGPKCDE 411
C C CHC G+ G C E
Sbjct: 69 PCLNGATCQDHTTHYTCHCPYGYTGKDCGE 98
Score = 40.3 bits (90), Expect = 4e-05
Identities = 31/108 (28%), Positives = 38/108 (35%), Gaps = 22/108 (20%)
Query: 322 CSNHGSCYLGKCECRDGYEGHDCSKSV--CPVL-CSGHGTYAGGI----CHCSEGWKGSE 374
C +H + Y C C GY G DC + V C C T C C GW G
Sbjct: 76 CQDHTTHYT--CHCPYGYTGKDCGEYVDWCSTNPCENQATCVQNKNQYQCLCGVGWTGKV 133
Query: 375 CDIPAHDCEPA---------DCSGRGQC----IAGLCHCKAGWKGPKC 409
CD+ C+ A G C + CHC G+ G C
Sbjct: 134 CDVEMVSCKDAALRKVVPLKKLCNNGTCEDIGNSHRCHCSDGYSGSYC 181
Score = 37.1 bits (82), Expect = 4e-04
Identities = 33/118 (27%), Positives = 46/118 (38%), Gaps = 19/118 (16%)
Query: 312 EGVTNSCPDD-CSNHGSC---YLG-KCECRDGY-------EGHDCSKSVCPVLCSGHGTY 359
E N C C N G C + G KC C +G+ G+DC + C +
Sbjct: 336 ESKVNFCATSPCQNGGVCTTIHAGHKCTCPEGFYGKNCEFSGYDCDSNPCQNGGVCRISD 395
Query: 360 AGG-ICHCSEGWKGSECDIPA-HDCEPADCSGRGQ-CIAGL----CHCKAGWKGPKCD 410
GG IC C G G+ C+I ++C+ C C L C+C G C+
Sbjct: 396 GGGYICDCPSGTNGTNCEIDTINECDSNPCKHLDAICQDKLGDYACYCPPKHTGKNCE 453
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 24.2 bits (50), Expect = 3.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 372 GSECDIPAHDCEPADCSGRGQCIAG 396
GS CD+ + + E CSG+ + G
Sbjct: 440 GSYCDVISGNAENGSCSGKTITVGG 464
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 24.2 bits (50), Expect = 3.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 372 GSECDIPAHDCEPADCSGRGQCIAG 396
GS CD+ + + E CSG+ + G
Sbjct: 441 GSYCDVISGNAENGSCSGKTITVGG 465
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 24.2 bits (50), Expect = 3.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 372 GSECDIPAHDCEPADCSGRGQCIAG 396
GS CD+ + + E CSG+ + G
Sbjct: 441 GSYCDVISGNAENGSCSGKTITVGG 465
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.323 0.134 0.432
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,715
Number of Sequences: 317
Number of extensions: 5764
Number of successful extensions: 37
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 17
length of query: 679
length of database: 114,650
effective HSP length: 61
effective length of query: 618
effective length of database: 95,313
effective search space: 58903434
effective search space used: 58903434
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 46 (22.6 bits)
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