Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000963-TA|BGIBMGA000963-PA|IPR006210|EGF,
IPR013032|EGF-like region, IPR008929|Chondroitin AC/alginate lyase,
IPR013111|EGF, extracellular
(679 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1019 + 29736644-29736709,29737156-29737515,29737595-297377... 55 2e-07
03_01_0527 + 3960982-3961290,3961371-3961464,3961898-3962084,396... 50 6e-06
03_02_0917 + 12372122-12372422,12372487-12372524,12373103-123731... 38 0.035
11_01_0101 - 738305-738556,738723-738977,739306-739554,739649-73... 37 0.061
12_01_0101 - 779047-779298,779459-779711,779857-780005,780033-78... 36 0.14
06_03_1036 + 27053480-27053729,27054616-27054704,27054881-270549... 36 0.14
11_08_0019 + 27697918-27698609,27701107-27701372,27701778-277019... 34 0.32
07_03_1693 - 28756331-28756435,28756558-28756664,28757114-287572... 34 0.43
08_02_1159 + 24773328-24773994,24775430-24775558,24776080-247762... 32 1.7
09_03_0111 - 12440818-12441129,12441242-12441585,12441663-124419... 31 2.3
09_02_0533 - 10325681-10326211,10326260-10326328,10326758-103268... 31 2.3
06_03_0223 - 18391177-18391287,18391570-18392081,18392200-183930... 31 2.3
02_04_0413 + 22681957-22682035,22682253-22682788 31 2.3
09_04_0476 - 17922072-17922469,17922546-17923241,17923405-179235... 31 3.0
09_04_0472 - 17895285-17896459,17897113-17897271,17897374-178977... 31 3.0
06_03_1325 - 29334401-29334859,29335163-29335857,29336538-293367... 31 4.0
04_04_1120 + 31037811-31038813,31038903-31038991,31039094-310391... 31 4.0
04_01_0377 - 4970034-4970687 31 4.0
01_06_0504 + 29867795-29868138,29868994-29869294,29869391-298700... 31 4.0
12_02_1104 + 26121288-26122200,26122324-26122506,26122841-26124009 30 7.0
04_03_0184 + 12395349-12395542,12396821-12397467,12398119-123986... 30 7.0
09_04_0479 - 17948043-17949037,17949554-17949715,17949809-179502... 29 9.2
05_04_0286 + 19833114-19834053,19834149-19834165 29 9.2
04_03_0592 - 17678172-17679415,17679751-17679897,17680656-17681268 29 9.2
>03_05_1019 +
29736644-29736709,29737156-29737515,29737595-29737735,
29737912-29738044,29738344-29738457,29738553-29738701,
29740815-29740907,29741019-29741079,29741180-29741512,
29742149-29742224,29742322-29742421,29743300-29743369,
29743987-29744082,29744355-29744402,29744427-29744658,
29745186-29745246,29745265-29745375
Length = 747
Score = 55.2 bits (127), Expect = 2e-07
Identities = 27/58 (46%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 313 GVTNSCPDDCSNHGSCYL-GKCECRDGYEGHDCSKSVCPVLCSGHG-----TYAGGIC 364
G SCP C+ HG C G CEC G+ G DCS +VC CS HG YAG C
Sbjct: 563 GFNGSCPAKCTGHGICKANGICECESGWTGIDCSTAVCDEQCSLHGGVCDNDYAGYTC 620
Score = 42.3 bits (95), Expect = 0.001
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 10/75 (13%)
Query: 349 CPVLCSGHGTY-AGGICHCSEGWKGSECDIPAHDCEPADCSGRGQCIAGLCHCKAGWKGP 407
CP C+GHG A GIC C GW G +C D CS G G+ C + G
Sbjct: 568 CPAKCTGHGICKANGICECESGWTGIDCSTAVCD---EQCSLHG----GV--CDNDYAGY 618
Query: 408 KCDEGEKNLLLNVLC 422
C +G L +C
Sbjct: 619 TCQKGSAILPSLSMC 633
>03_01_0527 +
3960982-3961290,3961371-3961464,3961898-3962084,
3962194-3962449,3962561-3962773,3962856-3962942,
3963089-3963223,3963296-3963409,3963507-3963754,
3963824-3963904,3963979-3964210,3964340-3964438,
3964513-3964701,3964928-3965023
Length = 779
Score = 50.0 bits (114), Expect = 6e-06
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 313 GVTNSCPDDCSNHGSCYLGKCECR-DGYEGHDCSKSV---CPVLCSGHGTYAGGICHCSE 368
G N P+D + + +C+C+ DG G C V C CSGHG GG C C
Sbjct: 226 GWCNVNPEDAYSSKVKFKEECDCKYDGLWGRFCETRVECSCINQCSGHGHCRGGFCQCDG 285
Query: 369 GWKGSECDIPAH 380
G+ G +C +P++
Sbjct: 286 GYFGIDCSMPSN 297
Score = 34.7 bits (76), Expect = 0.24
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 315 TNSCPDDCSNHGSC--YLGKCECRDGYEGHDCSK 346
T C DC+ G C LG+C C GY G C +
Sbjct: 107 TKRCEQDCNGQGVCNYELGECRCFHGYAGKRCEE 140
Score = 34.7 bits (76), Expect = 0.24
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 364 CHCS-EGWKGSECDIPAHDCEPADCSGRGQCIAGLCHCKAGWKGPKC 409
C C +G G C+ CSG G C G C C G+ G C
Sbjct: 246 CDCKYDGLWGRFCETRVECSCINQCSGHGHCRGGFCQCDGGYFGIDC 292
Score = 32.7 bits (71), Expect = 0.99
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Query: 382 CEPADCSGRGQCI--AGLCHCKAGWKGPKCDEGEK 414
CE DC+G+G C G C C G+ G +C+E +K
Sbjct: 110 CEQ-DCNGQGVCNYELGECRCFHGYAGKRCEEVQK 143
>03_02_0917 +
12372122-12372422,12372487-12372524,12373103-12373186,
12373796-12374504,12374641-12374729,12374834-12374903,
12374977-12375060,12375097-12375239,12375337-12375418,
12375605-12375687,12375769-12375835,12376287-12376376,
12377631-12377737,12377862-12377969
Length = 684
Score = 37.5 bits (83), Expect = 0.035
Identities = 38/156 (24%), Positives = 60/156 (38%), Gaps = 12/156 (7%)
Query: 320 DDCSNHGSCYLGKCECRDGYEGHDCSKSVCPVLCSGHGTYAGGICHCSEGWKGSECDIPA 379
D +N + +G+CE ++G + CS + C C G+KG
Sbjct: 527 DGYTNCEASGIGRCEIKNGGCWKETRNGKTISACSNEVSEG---CKCPPGFKGDGIK--- 580
Query: 380 HDCEPAD-CSGRGQCIAGLCHCKAGWKGPKCDEGEKNLLLNVLCALKRIAWIRLVEVMVR 438
CE D C + C C C+ W +C G K V + + + LV V
Sbjct: 581 -SCEDIDECKEKLYCQCKGCSCENTWGSYECSCGGKEATSAVGWSFLWVIFFGLVLAGVG 639
Query: 439 VFAVGVYAVQDGVALLVLSEMRVFNAASQPVRNVES 474
+AV Y ++ + SE+R A P+ N E+
Sbjct: 640 AYAVYKYRLRS----YMDSEIRAIMAQYMPLDNQEA 671
>11_01_0101 -
738305-738556,738723-738977,739306-739554,739649-739843,
739953-740060,740184-740405,740806-741390,741495-741863,
742423-742529,742755-742883,743027-743084,743166-743248,
744115-744196,744274-744350,744477-744560,744649-744718,
744796-744884,744965-745654,746127-746439
Length = 1338
Score = 36.7 bits (81), Expect = 0.061
Identities = 27/89 (30%), Positives = 33/89 (37%), Gaps = 14/89 (15%)
Query: 322 CSNHGSCYLGKCECRDGYEGHDCSKSVCPVLCSGHGTYAGGICHCSEGWKGSECDIPAHD 381
C GS G+CE +G D C+ G C C +G+KG H
Sbjct: 467 CEASGS---GRCEINNGGCWKDSRHGRTYSACTNDG------CKCPDGFKGDG----VHK 513
Query: 382 CEPAD-CSGRGQCIAGLCHCKAGWKGPKC 409
CE D C R C C CK W +C
Sbjct: 514 CEDIDECKERTACQCKECKCKNTWGSYEC 542
>12_01_0101 -
779047-779298,779459-779711,779857-780005,780033-780281,
780377-780571,780681-780788,780935-781156,781669-781986,
781988-782615,783059-783135,783161-783267,783491-783619,
783763-783820,783902-783984,784458-784539,784617-784693,
784827-784910,784999-785068,785146-785234,785319-786008,
786485-786797
Length = 1410
Score = 35.5 bits (78), Expect = 0.14
Identities = 27/89 (30%), Positives = 32/89 (35%), Gaps = 14/89 (15%)
Query: 322 CSNHGSCYLGKCECRDGYEGHDCSKSVCPVLCSGHGTYAGGICHCSEGWKGSECDIPAHD 381
C GS G CE +G D C+ G C C +G+KG H
Sbjct: 467 CEASGS---GHCEINNGGCWKDSRHGRTYSACTNDG------CKCPDGFKGDG----VHK 513
Query: 382 CEPAD-CSGRGQCIAGLCHCKAGWKGPKC 409
CE D C R C C CK W +C
Sbjct: 514 CEDIDECKERTACQCKECKCKNTWGSYEC 542
>06_03_1036 +
27053480-27053729,27054616-27054704,27054881-27054950,
27055145-27055228,27055332-27055408,27055519-27055583,
27055723-27055765,27055889-27055952,27056126-27056254,
27056522-27056625,27056724-27056828
Length = 359
Score = 35.5 bits (78), Expect = 0.14
Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 17/90 (18%)
Query: 364 CHCSEGWKGSECDIPAHDCEPAD-CSGRGQCIAGLCHCKAGWKGPKCD--------EGEK 414
C C G++G H CE D C + C CHCK W +C GE
Sbjct: 233 CRCPPGFQGD-----GHKCEDLDECKEKLACTCPNCHCKNTWGNYECKCKGNQIYIRGED 287
Query: 415 NLLLNVLCALKRIAWIRLVEVMVRVFAVGV 444
+ N ++ R W + V V VG+
Sbjct: 288 TCIAN---SMSRFGWFITILVASCVAGVGI 314
>11_08_0019 +
27697918-27698609,27701107-27701372,27701778-27701948,
27702187-27703166,27703723-27703804,27704148-27704170
Length = 737
Score = 34.3 bits (75), Expect = 0.32
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 345 SKSVCP-VLCSGHGTYAGGICHCSEGWKGS----ECDIPAHDCEPADCSGRGQCIAGLCH 399
S S C V +GHG +C+CS+G+ G+ E I ++C+P+ C G CH
Sbjct: 286 SHSYCVNVTNNGHGY----LCNCSDGYHGNPYLPEGCIDINECDPSTYK-ENPCPGGTCH 340
Query: 400 CKAGWKGPKCDEGEK 414
G KC+ G +
Sbjct: 341 NLEGGYKCKCNFGRR 355
>07_03_1693 -
28756331-28756435,28756558-28756664,28757114-28757245,
28757412-28757478,28757553-28757635,28757824-28757905,
28763101-28763177,28763278-28763361,28763443-28763512,
28763625-28763713,28763801-28764487,28765700-28765997
Length = 626
Score = 33.9 bits (74), Expect = 0.43
Identities = 37/161 (22%), Positives = 62/161 (38%), Gaps = 18/161 (11%)
Query: 330 LGKCECRDGYEGHDCSKSVCPVLCSGHGTYAGGICHCSEGWKGSECDIPAHDCEPAD-CS 388
+G+C+ +G + CS + C C G+KG CE D C
Sbjct: 466 VGRCQINNGGCWKETKNGKTVSACSNEESKG---CKCPPGFKGDGIK----SCEDIDECK 518
Query: 389 GRGQCIAGLCHCKAGWKGPKCDEGEKNLLL---NVLC----ALKRIAW--IRLVEVMVRV 439
+ C C C+ W +C G N+L + C A + W + ++ + +
Sbjct: 519 DKLFCQCKDCSCENTWGSYECSCGGSNMLYMREHDTCISKVASSSVGWGFLWVIFFGLAL 578
Query: 440 FAVGVYAV-QDGVALLVLSEMRVFNAASQPVRNVESMTSMR 479
+G YAV + + + SE+R A P+ N E+ R
Sbjct: 579 AGIGAYAVYKYRLRSYMDSEIRAIMAQYMPLENQETPNQHR 619
>08_02_1159 +
24773328-24773994,24775430-24775558,24776080-24776220,
24777393-24777487,24777545-24778606
Length = 697
Score = 31.9 bits (69), Expect = 1.7
Identities = 32/120 (26%), Positives = 45/120 (37%), Gaps = 23/120 (19%)
Query: 316 NSCPDDCSNHGSC--YLG--------KCECRDGYEGH-----------DC-SKSVCPVLC 353
+S P+ CS + C Y G +C C DGYEG+ +C S + P
Sbjct: 178 SSAPECCSANSFCKGYNGTTADYDGYRCYCSDGYEGNPYVDGGCRDIDECKSPHIYPCYG 237
Query: 354 SGHGTYAGGICHCSEGWKGSECDI-PAHDCEPADCSGRGQCIAGLCHCKAGWKGPKCDEG 412
T G C C G+KG+ + D + C GLC G +C +G
Sbjct: 238 DCKNTRGGYDCQCHHGYKGNASILNGCQDINECAEPEKYSCYGGLCINTPGAFVCRCHDG 297
>09_03_0111 -
12440818-12441129,12441242-12441585,12441663-12441989,
12443444-12443602,12443687-12443784,12444745-12444821
Length = 438
Score = 31.5 bits (68), Expect = 2.3
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Query: 309 SEAEGVTNSCPDDCSNHGSCYLGKCECRDGYEGHDCSKSVCPVL--CSGHGTY-AGGICH 365
S+A G ++C DD Y +C+C GYEG+ K C + C + TY GIC
Sbjct: 22 SDAGGGNSNCVDDIKGG---Y--RCKCSHGYEGNPYIKDGCKDINECLDNATYPCMGICK 76
Query: 366 CSEGWKGSEC 375
+ G C
Sbjct: 77 NTIGSFDCSC 86
>09_02_0533 -
10325681-10326211,10326260-10326328,10326758-10326855,
10326968-10327117,10327848-10327976,10328063-10328999
Length = 637
Score = 31.5 bits (68), Expect = 2.3
Identities = 40/129 (31%), Positives = 51/129 (39%), Gaps = 29/129 (22%)
Query: 311 AEGVTNSCPDDCSNHGSCY---LG-KCECRDGYEG--------HDCSKSVCP--VLCSG- 355
+E S PD S + C+ LG KC C DGY+G HD + P C G
Sbjct: 269 SECTYESAPDCLSANSFCHAYDLGYKCHCSDGYQGNPYIRGGCHDIDECKSPQDYSCYGN 328
Query: 356 -HGTYAGGICHCSEGWKGSECDIPAHDCEPAD-CSGR------GQCI---AGL-CHCKAG 403
+ T IC C G++ P + C+ D C R G+CI G C C G
Sbjct: 329 CNNTPGSHICDCPRGYE-RNASTP-NGCKDIDECGHRETYQCYGECINFPGGFDCLCYHG 386
Query: 404 WKGPKCDEG 412
G EG
Sbjct: 387 TDGDPRKEG 395
>06_03_0223 -
18391177-18391287,18391570-18392081,18392200-18393019,
18393603-18393671,18393973-18394062,18395381-18395575
Length = 598
Score = 31.5 bits (68), Expect = 2.3
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 414 KNLLLNVLCALKRIAWIRLVEVMVRVFAVGVYAVQDGVAL 453
+ LL N+LC R+ I ++++MV ++ GV+ V+ G+A+
Sbjct: 74 EQLLYNLLC-FYRVIVIVIIDIMVNIWLNGVHMVEHGLAM 112
>02_04_0413 + 22681957-22682035,22682253-22682788
Length = 204
Score = 31.5 bits (68), Expect = 2.3
Identities = 27/91 (29%), Positives = 29/91 (31%), Gaps = 9/91 (9%)
Query: 312 EGVTNSCPDDCSNHGSCYLGKCECRDGYEGHD--CSKSVCPVLCSGHGTYAGGICHCSEG 369
E C + CS G C G+C E H C C CSG C
Sbjct: 109 ESAAGCCCNGCSG-GGCGGGQCPPSPSCENHHPPCKPGCCCCGCSGGECPPPPSPPCQH- 166
Query: 370 WKGSECDIPAHDCEPADCSGRGQCIAGLCHC 400
EC P CE CS G C G C
Sbjct: 167 ----ECP-PTPPCEHPPCSESGCCDKGCNSC 192
>09_04_0476 -
17922072-17922469,17922546-17923241,17923405-17923569,
17923670-17924105,17924314-17924739
Length = 706
Score = 31.1 bits (67), Expect = 3.0
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 10/90 (11%)
Query: 321 DCSNHGSCYLGKCECRDGYEGHDCSKSVCPVL--CSGHGTY-AGGICHCSEGWKGSECDI 377
DC N + + C+C G++G+ K C + C + TY G+C + G C
Sbjct: 258 DCHNSTNGHGYLCKCSKGFDGNPYIKDGCKDINECLDNTTYPCAGLCQNTMGGYDCSCHQ 317
Query: 378 PAHDCEPADCSGRGQCIAGLCHCKAGWKGP 407
H E C+ + K+ W+ P
Sbjct: 318 GQHKVEDV-------CVPDQKNQKSSWEMP 340
>09_04_0472 -
17895285-17896459,17897113-17897271,17897374-17897794,
17898520-17898552,17898902-17899384
Length = 756
Score = 31.1 bits (67), Expect = 3.0
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 332 KCECRDGYEGHDCSKSVCPVL--CSGHGTY-AGGIC 364
+C+C DGYEG+ K C + C + TY GIC
Sbjct: 294 RCKCSDGYEGNPYVKDGCKDINECLDNATYPCPGIC 329
>06_03_1325 -
29334401-29334859,29335163-29335857,29336538-29336750,
29338791-29339472,29339781-29340020
Length = 762
Score = 30.7 bits (66), Expect = 4.0
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 357 GTYAGGICHCSEGWKGSECDIPAHDCEPAD-CS-GRGQCIAG-LCHCKAGWKGPKCDEGE 413
GT G +C+C+ G+KG+ +P C D C+ G C G +C G C EGE
Sbjct: 283 GTADGYVCNCTSGYKGNPY-LPG-GCTDIDVCAPGNDGCPDGMICSNFPGGHNCSCPEGE 340
Query: 414 -KNLLLNVLCA---LKR-IAWIRLV-EVMVRVFAVGVYAVQDGVALLVLS 457
K+ VL LKR + ++ + V A+ V G+A++V+S
Sbjct: 341 HKSNKSGVLICEPDLKRSLPDLKFKRSYRLPVSAIIAIGVTGGIAIIVMS 390
>04_04_1120 +
31037811-31038813,31038903-31038991,31039094-31039163,
31039270-31039353,31039452-31039528,31039631-31039712,
31039847-31039929,31040270-31040333,31040435-31040566,
31040674-31040777,31040901-31040996,31041144-31041251
Length = 663
Score = 30.7 bits (66), Expect = 4.0
Identities = 32/101 (31%), Positives = 38/101 (37%), Gaps = 22/101 (21%)
Query: 319 PDDCS-NHGSCYLGKCECRDGYEGHDCSKSVCPVLCSGHGTYAGGICHCSEGWKGSECDI 377
P C+ N+G C+ G RDG CS S SG C C G+KG
Sbjct: 472 PGRCAMNNGGCWKGT---RDGKTFSACSDSDL----SG--------CKCPPGFKGDGLH- 515
Query: 378 PAHDCEPAD-CSGRGQCIAGLCHCKAGWKGPKCDEGEKNLL 417
CE D CS + C C CK W C NL+
Sbjct: 516 ----CEDVDECSEKLACSCPHCSCKNTWGSFDCSCHGNNLM 552
>04_01_0377 - 4970034-4970687
Length = 217
Score = 30.7 bits (66), Expect = 4.0
Identities = 20/78 (25%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
Query: 318 CPDD--CSNHGSCYLGKCECRDGYEGHDCSKSVCPVLCSGHGTYAGGICHCSEGWKGSEC 375
CP + CS G C LG+ C G + C S G T + C G+ G
Sbjct: 30 CPHNLCCSQFGYCGLGRDYCGTGCQSGACCSSQRCGSQGGGATCSNNQCCSQYGYCGFGS 89
Query: 376 DIPAHDCEPADCSGRGQC 393
+ C+ C +C
Sbjct: 90 EYCGSGCQNGPCRADIKC 107
Score = 30.3 bits (65), Expect = 5.3
Identities = 20/86 (23%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 309 SEAEGVTNSCPDDCSNHGSCYLGKCECRDGYEGHDCSKSV-CPVLCSGHGTYAGGICHCS 367
S+ G T S CS +G C G C G + C + C +G +C
Sbjct: 66 SQGGGATCSNNQCCSQYGYCGFGSEYCGSGCQNGPCRADIKCGRNANGE-LCPNNMCCSQ 124
Query: 368 EGWKGSECDIPAHDCEPADCSGRGQC 393
G+ G + + C+ C +C
Sbjct: 125 WGYCGLGSEFCGNGCQSGACCPEKRC 150
>01_06_0504 +
29867795-29868138,29868994-29869294,29869391-29870078,
29870192-29870421
Length = 520
Score = 30.7 bits (66), Expect = 4.0
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 9/46 (19%)
Query: 321 DCSNHGSCYL-------GK--CECRDGYEGHDCSKSVCPVLCSGHG 357
DCS HGS +L G+ CEC + G DCS + G G
Sbjct: 70 DCSGHGSVFLDGVTGEDGRPGCECNSCFSGPDCSVRIPNCAADGQG 115
>12_02_1104 + 26121288-26122200,26122324-26122506,26122841-26124009
Length = 754
Score = 29.9 bits (64), Expect = 7.0
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 12/79 (15%)
Query: 309 SEAEGVTNSCPDDCSNHGSCYLGKCECRDGYEG-HDCSKSVCPVLCSGHGTYAGGICHCS 367
S+ G D C + C + K + + YE + C K VC + G+Y IC C
Sbjct: 290 SQGYGGNPYLSDGCQDIDECEMRKLDPK--YEELYPCRKGVCQ---NTPGSY---ICKCK 341
Query: 368 EGWKGSECDIPAHDCEPAD 386
KG + D + C+PAD
Sbjct: 342 ---KGKKSDGTGYGCQPAD 357
>04_03_0184 +
12395349-12395542,12396821-12397467,12398119-12398655,
12399087-12399239,12399315-12399809,12400032-12400555
Length = 849
Score = 29.9 bits (64), Expect = 7.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 329 YLG-KCECRDGYEGHDCSKSVCPVL--CSGHGTYAGGICHCSEG-WKGSEC-DIPAHDCE 383
Y+G +C+C DG+ G+ + C + C GICH + G ++ EC D +D
Sbjct: 437 YVGYRCKCMDGFHGNPYDANGCEDVDECKKTPGIFKGICHNNIGSYQCMECLDKTEYDVT 496
Query: 384 PADCSGR 390
C R
Sbjct: 497 AMQCVSR 503
>09_04_0479 -
17948043-17949037,17949554-17949715,17949809-17950262,
17952895-17953326
Length = 680
Score = 29.5 bits (63), Expect = 9.2
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 332 KCECRDGYEGHDCSKSVCPVL--CSGHGTY-AGGIC 364
+C+C +GYEG+ K C + C + TY GIC
Sbjct: 277 RCKCSNGYEGNPYIKDGCKDIDECLNNATYPCKGIC 312
>05_04_0286 + 19833114-19834053,19834149-19834165
Length = 318
Score = 29.5 bits (63), Expect = 9.2
Identities = 14/47 (29%), Positives = 18/47 (38%)
Query: 352 LCSGHGTYAGGICHCSEGWKGSECDIPAHDCEPADCSGRGQCIAGLC 398
+C G G +C C + S CD A P S + I LC
Sbjct: 261 VCGHDGDSHGDLCLCGDWNSTSNCDSSADAARPNAASAAPRAIVALC 307
>04_03_0592 - 17678172-17679415,17679751-17679897,17680656-17681268
Length = 667
Score = 29.5 bits (63), Expect = 9.2
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 15/85 (17%)
Query: 334 ECRDGYEGHDCSKSVCPVLCSGHGTYAGGICHCSEGWKGSECDIPAHD-CEPA-DCSGR- 390
E R + + C+ S + S +G G C CS+G++G+ + HD C+ +C
Sbjct: 157 EARKHLDSYACASSNSVCIDSSNGP--GYFCKCSQGFEGNPY-LQGHDGCQDINECEDSN 213
Query: 391 -----GQCIAGL----CHCKAGWKG 406
G+CI L C C AG +G
Sbjct: 214 KYPCYGKCINKLGGFDCFCPAGTRG 238
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.323 0.134 0.432
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,576,520
Number of Sequences: 37544
Number of extensions: 699936
Number of successful extensions: 1625
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1587
Number of HSP's gapped (non-prelim): 52
length of query: 679
length of database: 14,793,348
effective HSP length: 87
effective length of query: 592
effective length of database: 11,527,020
effective search space: 6823995840
effective search space used: 6823995840
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 63 (29.5 bits)
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