BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000963-TA|BGIBMGA000963-PA|IPR006210|EGF,
IPR013032|EGF-like region, IPR008929|Chondroitin AC/alginate lyase,
IPR013111|EGF, extracellular
(679 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 77 2e-15
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 60 2e-10
AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein. 46 2e-06
AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein. 46 2e-06
AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein. 46 2e-06
AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein. 46 2e-06
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 41 9e-05
DQ370040-1|ABD18601.1| 121|Anopheles gambiae putative TIL domai... 26 2.8
AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykin... 26 2.8
DQ370044-1|ABD18605.1| 99|Anopheles gambiae putative salivary ... 25 5.0
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 25 5.0
DQ007318-1|AAY24700.1| 153|Anopheles gambiae lysozyme c-4 protein. 25 6.5
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 25 6.5
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 77.0 bits (181), Expect = 2e-15
Identities = 45/139 (32%), Positives = 61/139 (43%), Gaps = 14/139 (10%)
Query: 293 SLYNDELQPHHVEMIVSEAEGVTNSCPDDCSNHGSCYLGKCECRDGYEGHDCSKSVCPV- 351
+L N + + E V+ + G CS+ G C G+C C G+EG C + C
Sbjct: 506 NLQNSQNRRELFEQCVAPSVGDELRTGPICSDRGECICGQCYCNPGFEGEHCECNECATI 565
Query: 352 ---LCSG--HGTYAGGICHCSEGWKGS--ECDIPAHDCE----PADCSGRGQCIAGLCHC 400
+C G HG G C C + W G EC C+ A CSG GQC G C C
Sbjct: 566 DGSICGGPDHGICTCGTCSCFDSWSGDNCECTTDTTGCKAPSNDAVCSGHGQCNCGRCSC 625
Query: 401 KAGWKGPKCD--EGEKNLL 417
+ GP C+ +GE+ L
Sbjct: 626 DESFFGPFCETKDGEQPAL 644
Score = 44.8 bits (101), Expect = 8e-06
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 24/104 (23%)
Query: 343 DCSKSVCPV----LCSGHGTYAGGICHCSEGWKGSECDIPAHDCE-----------PAD- 386
+C K+ P+ LC+ +G Y G C C GW G C+ + + P+
Sbjct: 467 NCEKNKKPMELSELCNFNGDYVCGQCQCYVGWIGKTCECNLQNSQNRRELFEQCVAPSVG 526
Query: 387 --------CSGRGQCIAGLCHCKAGWKGPKCDEGEKNLLLNVLC 422
CS RG+CI G C+C G++G C+ E + +C
Sbjct: 527 DELRTGPICSDRGECICGQCYCNPGFEGEHCECNECATIDGSIC 570
Score = 25.4 bits (53), Expect = 5.0
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 11/46 (23%)
Query: 322 CSNHGSCYLGKCEC-----------RDGYEGHDCSKSVCPVLCSGH 356
CS HG C G+C C +DG + CS + C+ H
Sbjct: 612 CSGHGQCNCGRCSCDESFFGPFCETKDGEQPALCSSYEDCIRCAVH 657
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 59.7 bits (138), Expect = 2e-10
Identities = 40/119 (33%), Positives = 48/119 (40%), Gaps = 28/119 (23%)
Query: 320 DDCSNHGSCYLGKCECRDGYEGHDCSKSVCPVL-----------------CSGHGTYAGG 362
D+CSN G+ G CEC Y G C S L CSG G G
Sbjct: 510 DECSNAGTYKCGICECDGTYHGQRCECSAMESLLEPGMVDACRMSNASEECSGRGQCVCG 569
Query: 363 ICHCS------EGWKGSECDIPAHDCE-PAD--CSG--RGQCIAGLCHCKAGWKGPKCD 410
+C C E G C+ C+ P CSG G+C+ G C C+ GW GP CD
Sbjct: 570 VCVCERRPNPDELIDGRYCECDNFSCDRPGGLLCSGPDHGRCVCGQCECREGWTGPACD 628
Score = 58.4 bits (135), Expect = 6e-10
Identities = 36/105 (34%), Positives = 45/105 (42%), Gaps = 20/105 (19%)
Query: 316 NSCPDDCSNHGSCYLGKCECR------DGYEGH--DCSKSVCP----VLCSG--HGTYAG 361
++ ++CS G C G C C + +G +C C +LCSG HG
Sbjct: 554 SNASEECSGRGQCVCGVCVCERRPNPDELIDGRYCECDNFSCDRPGGLLCSGPDHGRCVC 613
Query: 362 GICHCSEGWKGSECDIPAHD--CEPAD----CSGRGQCIAGLCHC 400
G C C EGW G CD A + C P CSG G C G C C
Sbjct: 614 GQCECREGWTGPACDCRASNETCMPPGGGELCSGHGTCECGTCRC 658
Score = 51.2 bits (117), Expect = 9e-08
Identities = 32/99 (32%), Positives = 40/99 (40%), Gaps = 11/99 (11%)
Query: 324 NHGSCYLGKCECRDGYEGHDC----SKSVC-----PVLCSGHGTYAGGICHCSEGWKGSE 374
+HG C G+CECR+G+ G C S C LCSGHGT G C C+ G
Sbjct: 607 DHGRCVCGQCECREGWTGPACDCRASNETCMPPGGGELCSGHGTCECGTCRCTVTEDGRY 666
Query: 375 CDIPAHDCEPADCSGRGQCIAGLCHCKAGWKGPKCDEGE 413
C C+GR C+ GP + E
Sbjct: 667 TGRYCEKC--PTCAGRCNEFKHCVQCQQYKTGPLAEANE 703
Score = 33.9 bits (74), Expect = 0.014
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 7/38 (18%)
Query: 322 CSNHGSCYLGKCEC---RDG-YEGHDCSKSVCPVLCSG 355
CS HG+C G C C DG Y G C K CP C+G
Sbjct: 645 CSGHGTCECGTCRCTVTEDGRYTGRYCEK--CPT-CAG 679
>AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 46.4 bits (105), Expect = 2e-06
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 353 CSGHGTYAGGICHCSEGWKGSECDIPAHDCEPADCSGRGQCIAGLCHCKAGWKGPKCD-- 410
CS +++G C C+ G C P++D A CSG GQC G C C + GP C+
Sbjct: 7 CSCFDSWSGDNCECTTDTTG--CKAPSND---AVCSGHGQCNCGRCSCDESFFGPFCETK 61
Query: 411 EGEKNLL 417
+GE+ L
Sbjct: 62 DGEQPAL 68
Score = 44.0 bits (99), Expect = 1e-05
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 10/81 (12%)
Query: 328 CYLGKCECRDGYEGHDCSKSV----CPV-----LCSGHGTYAGGICHCSEGWKGSECDIP 378
C G C C D + G +C + C +CSGHG G C C E + G C+
Sbjct: 2 CTCGTCSCFDSWSGDNCECTTDTTGCKAPSNDAVCSGHGQCNCGRCSCDESFFGPFCETK 61
Query: 379 AHDCEPADCSGRGQCIAGLCH 399
+ +PA CS CI H
Sbjct: 62 DGE-QPALCSSYEDCIRCAVH 81
Score = 34.7 bits (76), Expect = 0.008
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 322 CSNHGSCYLGKCECRDGYEGHDC--SKSVCPVLCSGH 356
CS HG C G+C C + + G C P LCS +
Sbjct: 36 CSGHGQCNCGRCSCDESFFGPFCETKDGEQPALCSSY 72
Score = 25.0 bits (52), Expect = 6.5
Identities = 7/18 (38%), Positives = 8/18 (44%)
Query: 393 CIAGLCHCKAGWKGPKCD 410
C G C C W G C+
Sbjct: 2 CTCGTCSCFDSWSGDNCE 19
>AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 46.4 bits (105), Expect = 2e-06
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 353 CSGHGTYAGGICHCSEGWKGSECDIPAHDCEPADCSGRGQCIAGLCHCKAGWKGPKCD-- 410
CS +++G C C+ G C P++D A CSG GQC G C C + GP C+
Sbjct: 7 CSCFDSWSGDNCECTTDTTG--CKAPSND---AVCSGHGQCNCGRCSCDESFFGPFCETK 61
Query: 411 EGEKNLL 417
+GE+ L
Sbjct: 62 DGEQPAL 68
Score = 44.0 bits (99), Expect = 1e-05
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 10/81 (12%)
Query: 328 CYLGKCECRDGYEGHDCSKSV----CPV-----LCSGHGTYAGGICHCSEGWKGSECDIP 378
C G C C D + G +C + C +CSGHG G C C E + G C+
Sbjct: 2 CTCGTCSCFDSWSGDNCECTTDTTGCKAPSNDAVCSGHGQCNCGRCSCDESFFGPFCETK 61
Query: 379 AHDCEPADCSGRGQCIAGLCH 399
+ +PA CS CI H
Sbjct: 62 DGE-QPALCSSYEDCIRCAVH 81
Score = 34.7 bits (76), Expect = 0.008
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 322 CSNHGSCYLGKCECRDGYEGHDC--SKSVCPVLCSGH 356
CS HG C G+C C + + G C P LCS +
Sbjct: 36 CSGHGQCNCGRCSCDESFFGPFCETKDGEQPALCSSY 72
Score = 25.0 bits (52), Expect = 6.5
Identities = 7/18 (38%), Positives = 8/18 (44%)
Query: 393 CIAGLCHCKAGWKGPKCD 410
C G C C W G C+
Sbjct: 2 CTCGTCSCFDSWSGDNCE 19
>AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 46.4 bits (105), Expect = 2e-06
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 353 CSGHGTYAGGICHCSEGWKGSECDIPAHDCEPADCSGRGQCIAGLCHCKAGWKGPKCD-- 410
CS +++G C C+ G C P++D A CSG GQC G C C + GP C+
Sbjct: 7 CSCFDSWSGDNCECTTDTTG--CKAPSND---AVCSGHGQCNCGRCSCDESFFGPFCETK 61
Query: 411 EGEKNLL 417
+GE+ L
Sbjct: 62 DGEQPAL 68
Score = 44.0 bits (99), Expect = 1e-05
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 10/81 (12%)
Query: 328 CYLGKCECRDGYEGHDCSKSV----CPV-----LCSGHGTYAGGICHCSEGWKGSECDIP 378
C G C C D + G +C + C +CSGHG G C C E + G C+
Sbjct: 2 CTCGTCSCFDSWSGDNCECTTDTTGCKAPSNDAVCSGHGQCNCGRCSCDESFFGPFCETK 61
Query: 379 AHDCEPADCSGRGQCIAGLCH 399
+ +PA CS CI H
Sbjct: 62 DGE-QPALCSSYEDCIRCAVH 81
Score = 34.7 bits (76), Expect = 0.008
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 322 CSNHGSCYLGKCECRDGYEGHDC--SKSVCPVLCSGH 356
CS HG C G+C C + + G C P LCS +
Sbjct: 36 CSGHGQCNCGRCSCDESFFGPFCETKDGEQPALCSSY 72
Score = 25.0 bits (52), Expect = 6.5
Identities = 7/18 (38%), Positives = 8/18 (44%)
Query: 393 CIAGLCHCKAGWKGPKCD 410
C G C C W G C+
Sbjct: 2 CTCGTCSCFDSWSGDNCE 19
>AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 46.4 bits (105), Expect = 2e-06
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 353 CSGHGTYAGGICHCSEGWKGSECDIPAHDCEPADCSGRGQCIAGLCHCKAGWKGPKCD-- 410
CS +++G C C+ G C P++D A CSG GQC G C C + GP C+
Sbjct: 7 CSCFDSWSGDNCECTTDTTG--CKAPSND---AVCSGHGQCNCGRCSCDESFFGPFCETK 61
Query: 411 EGEKNLL 417
+GE+ L
Sbjct: 62 DGEQPAL 68
Score = 44.0 bits (99), Expect = 1e-05
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 10/81 (12%)
Query: 328 CYLGKCECRDGYEGHDCSKSV----CPV-----LCSGHGTYAGGICHCSEGWKGSECDIP 378
C G C C D + G +C + C +CSGHG G C C E + G C+
Sbjct: 2 CTCGTCSCFDSWSGDNCECTTDTTGCKAPSNDAVCSGHGQCNCGRCSCDESFFGPFCETK 61
Query: 379 AHDCEPADCSGRGQCIAGLCH 399
+ +PA CS CI H
Sbjct: 62 DGE-QPALCSSYEDCIRCAVH 81
Score = 34.7 bits (76), Expect = 0.008
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 322 CSNHGSCYLGKCECRDGYEGHDC--SKSVCPVLCSGH 356
CS HG C G+C C + + G C P LCS +
Sbjct: 36 CSGHGQCNCGRCSCDESFFGPFCETKDGEQPALCSSY 72
Score = 25.0 bits (52), Expect = 6.5
Identities = 7/18 (38%), Positives = 8/18 (44%)
Query: 393 CIAGLCHCKAGWKGPKCD 410
C G C C W G C+
Sbjct: 2 CTCGTCSCFDSWSGDNCE 19
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 41.1 bits (92), Expect = 9e-05
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 333 CECRDGYEGHDCSKSVCPVLCSGHGTYAGGIC-HCSEGWKGSECDIPAHDCEPADCSGRG 391
C+C E D C +C H T AG C C++G+ G+ +DC+ C G
Sbjct: 727 CDCNKHAEICDSETGRC--ICQ-HNT-AGDTCDQCAKGYYGNALGGTPYDCKRCPCPNNG 782
Query: 392 QC--IAG---LC-HCKAGWKGPKCD 410
C +AG +C C G+ GP+C+
Sbjct: 783 ACMQMAGDTVICLECPVGYFGPRCE 807
Score = 39.9 bits (89), Expect = 2e-04
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 23/103 (22%)
Query: 334 ECRDGY----EGHDCSKSVCPVLCSGHG---TYAGGICHCSEGWKGSECD--IPAH---- 380
EC++GY G+ C C + S + TY+G C C G G +CD PA+
Sbjct: 922 ECKNGYWNIVSGNGCESCNCDPIGSYNASCDTYSGD-CFCKPGVVGKKCDKCAPAYYGFS 980
Query: 381 -------DCEPADCSGRGQCIA-GLCHCKAGWKGPKCDEGEKN 415
DC+P+ G QC G C C +G +CD ++N
Sbjct: 981 EDGCHACDCDPSGSKG-SQCNQYGQCPCNDNVEGRRCDRCKEN 1022
Score = 37.1 bits (82), Expect = 0.002
Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 21/100 (21%)
Query: 333 CE-CRDGY---EGHDCSKSVC-PVLCSGHGTYAGGICHCSEGWKGSECD--------IPA 379
CE C++ + E C C PV A G C C G G +CD
Sbjct: 379 CERCKENFFMREDGYCINCGCDPVGSRSLQCNAEGRCQCKPGVTGEKCDRCDSNYFNFGP 438
Query: 380 HDCEPADCSGRG------QC--IAGLCHCKAGWKGPKCDE 411
H C+P +C RG C + G+C CK +G C E
Sbjct: 439 HGCQPCNCDERGSLDNTPSCDPVTGVCSCKENVEGRHCRE 478
Score = 33.1 bits (72), Expect = 0.025
Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 5/103 (4%)
Query: 324 NHGSCYLGKCECRDGYEGHDCSKSVCPVLCSGHGTYAGGICH-CSEGWKGSEC-DIPAHD 381
++G L E + + G ++ C+ Y G C C+ G++ + P
Sbjct: 664 DYGEAILDDVELQTAHRGAAGRQATWIEQCTCPEGYLGQFCESCAPGYRHNPARGGPFMP 723
Query: 382 CEPADCSGRGQCI---AGLCHCKAGWKGPKCDEGEKNLLLNVL 421
C P DC+ + G C C+ G CD+ K N L
Sbjct: 724 CVPCDCNKHAEICDSETGRCICQHNTAGDTCDQCAKGYYGNAL 766
Score = 32.7 bits (71), Expect = 0.033
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Query: 317 SCPDDCSNHGSC--YLGKCECRDGYEGHDCSKSVCPVLCSGHGTYAGGICHCS-EGWKGS 373
+C S + SC Y G C C+ G G C K C G C C G KGS
Sbjct: 940 NCDPIGSYNASCDTYSGDCFCKPGVVGKKCDK--CAPAYYGFSEDGCHACDCDPSGSKGS 997
Query: 374 ECD 376
+C+
Sbjct: 998 QCN 1000
Score = 31.5 bits (68), Expect = 0.075
Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 16/94 (17%)
Query: 333 CECRDGYEGH---DCSKSVCPVLCSGHGTYAGGIC-HCSEGWKGSECDIPAHDCEPADCS 388
C+C + + +C+++ L H T AG C C G G P CE C
Sbjct: 830 CDCNGNVDPNAVGNCNRTTGECLKCIHNT-AGPHCDQCLPGHFGDPLAEPHGSCEECSCY 888
Query: 389 GRG-----------QCIAGLCHCKAGWKGPKCDE 411
RG I G CHCK G C+E
Sbjct: 889 PRGTEQTEKGISICDAINGNCHCKPNVIGRTCNE 922
Score = 30.3 bits (65), Expect = 0.17
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 382 CEPADCSGRGQCIA-GLCHCKAGWKGPKCDEGEKN 415
C+P S QC A G C CK G G KCD + N
Sbjct: 399 CDPVG-SRSLQCNAEGRCQCKPGVTGEKCDRCDSN 432
Score = 24.6 bits (51), Expect = 8.7
Identities = 10/30 (33%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 318 CPDDCSNHGSC-YLGKCECRDGYEGHDCSK 346
C S C G+C C D EG C +
Sbjct: 989 CDPSGSKGSQCNQYGQCPCNDNVEGRRCDR 1018
>DQ370040-1|ABD18601.1| 121|Anopheles gambiae putative TIL domain
polypeptide protein.
Length = 121
Score = 26.2 bits (55), Expect = 2.8
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 315 TNSCPDDCSNHGSCYLGKCECRDGYEGHDCSKSVCPVLCSGHG 357
TN +D + SC G C CR GY + ++ V +C G
Sbjct: 80 TNQRKNDSACRRSCNPG-CFCRGGYVRNKSNRCVPSYMCQSMG 121
>AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykinin
receptor protein.
Length = 450
Score = 26.2 bits (55), Expect = 2.8
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 558 RVVQMDVHVTV--NVCWKMASTAAPVLKELFTSLLCKKSYIQHRYIISQWLNFEDGM 612
RVV+M + V + VCW + +L + L KK YIQ Y+ WL + M
Sbjct: 294 RVVKMMMIVVIIFAVCW-LPFQIYFILTSYYPELT-KKPYIQEVYLAIYWLAMSNSM 348
>DQ370044-1|ABD18605.1| 99|Anopheles gambiae putative salivary
secreted peptide withTIL domain protein.
Length = 99
Score = 25.4 bits (53), Expect = 5.0
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 326 GSCYLGKCECRDGYEGHDCSKSVCPVLCSGH 356
G C G C CR GY + + V P LCS +
Sbjct: 54 GVCVSG-CFCRPGYFRREDNACVKPWLCSNN 83
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 25.4 bits (53), Expect = 5.0
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 572 WKMASTAAPVLKELFTSLLCKKSYIQHRYIISQWLNFEDGMTDCSDSECC--SRP 624
WK AAP L+ + + + R + + L FED T ++ E C SRP
Sbjct: 1532 WKFTPPAAPHFGGLWEAAVKSMKFHLKRVLGTGHLTFEDLSTLLAEIEACLNSRP 1586
>DQ007318-1|AAY24700.1| 153|Anopheles gambiae lysozyme c-4 protein.
Length = 153
Score = 25.0 bits (52), Expect = 6.5
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 366 CSEGWKGSECDIPAHDCEPADCSGRGQCIAGLCHCK--AGWKG 406
C EG KG CD D D + +C + + A WKG
Sbjct: 93 CREGRKGGHCDKKCEDFLNDDLTDDIECAKQIYNDSGFAAWKG 135
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 25.0 bits (52), Expect = 6.5
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 318 CPDDC-SNHGSCYLGKCECRDGYEGHDC--SKSVCPVLCSGHG 357
CP+ ++G+C + KC + +C K VCP C G G
Sbjct: 265 CPEHLLKDNGAC-VRKCPKGKMPQNSECVPCKGVCPKTCPGEG 306
Score = 24.6 bits (51), Expect = 8.7
Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 559 VVQMDVHVTVNVCWKMASTAAPVLKELFTSLLCKKSYIQHRYII 602
+ +DV+ + CW + + A P K+L +K+ RY++
Sbjct: 1060 ICSLDVYCILLSCWVLDADARPTFKQL-AETFAEKARDPGRYLM 1102
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.323 0.134 0.432
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,481
Number of Sequences: 2123
Number of extensions: 25722
Number of successful extensions: 125
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 52
Number of HSP's gapped (non-prelim): 50
length of query: 679
length of database: 516,269
effective HSP length: 69
effective length of query: 610
effective length of database: 369,782
effective search space: 225567020
effective search space used: 225567020
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 51 (24.6 bits)
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