GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000962-TA|BGIBMGA000962-PA|undefined
         (99 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24550 Cluster: Type II transmembrane protein; n=5; Sop...    32   2.6  
UniRef50_Q7QBW9 Cluster: ENSANGP00000015377; n=1; Anopheles gamb...    31   4.6  
UniRef50_A0UZI8 Cluster: Glycoside hydrolase, family 9 precursor...    30   8.0  

>UniRef50_Q24550 Cluster: Type II transmembrane protein; n=5;
          Sophophora|Rep: Type II transmembrane protein -
          Drosophila melanogaster (Fruit fly)
          Length = 3004

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 1  MTMKSLKYSEREDMMEGFS-XXXXXXXXXXXXXNIYAEPF 39
          MTMKS+KYS+ + +M+G++              NIYAEPF
Sbjct: 1  MTMKSMKYSDCDTIMDGYNPVPPPLPRRVPPVRNIYAEPF 40


>UniRef50_Q7QBW9 Cluster: ENSANGP00000015377; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000015377 - Anopheles gambiae
           str. PEST
          Length = 844

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 7/53 (13%)

Query: 34  IYAEPFVDPRIFYFVICKDSAC--WISDTDCIRE---ISVNGSDYFRGTFSSH 81
           I A   V P +F  +IC+D     W   +D +RE   I++NG+D+F   F  H
Sbjct: 694 IVAVDSVSPTVF--IICEDGNLIHWFDCSDFMREPSDIAINGTDFFVCDFKGH 744


>UniRef50_A0UZI8 Cluster: Glycoside hydrolase, family 9 precursor;
           n=2; Clostridium cellulolyticum|Rep: Glycoside
           hydrolase, family 9 precursor - Clostridium
           cellulolyticum H10
          Length = 757

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 51  KDSACWISDTDCIREISVNGSDYF-RGTFSSHTGRI 85
           KDS   I++ D IR+I   G+DYF R TF  + G +
Sbjct: 145 KDSFTQINEEDHIRDILKWGNDYFLRSTFMDNKGEV 180


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.326    0.140    0.436 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,150,915
Number of Sequences: 1657284
Number of extensions: 3048875
Number of successful extensions: 5029
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 5029
Number of HSP's gapped (non-prelim): 3
length of query: 99
length of database: 575,637,011
effective HSP length: 76
effective length of query: 23
effective length of database: 449,683,427
effective search space: 10342718821
effective search space used: 10342718821
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 65 (30.3 bits)