GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000962-TA|BGIBMGA000962-PA|undefined
         (99 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK025598-1|BAB15186.1|  721|Homo sapiens protein ( Homo sapiens ...    28   5.3  
AF218013-1|AAG17255.1|  234|Homo sapiens unknown protein.              28   5.3  
AC104665-1|AAY24115.1|  721|Homo sapiens unknown protein.              28   5.3  

>AK025598-1|BAB15186.1|  721|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21945 fis, clone HEP04702. ).
          Length = 721

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 63  IREISVNGSDYFRGTFSSHTGRISRIGVF 91
           IR+ S++ SD FR +FS   G +S + VF
Sbjct: 672 IRDGSLSRSDVFRDSFSHSPGAVSSLKVF 700


>AF218013-1|AAG17255.1|  234|Homo sapiens unknown protein.
          Length = 234

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 63  IREISVNGSDYFRGTFSSHTGRISRIGVF 91
           IR+ S++ SD FR +FS   G +S + VF
Sbjct: 185 IRDGSLSRSDVFRDSFSHSPGAVSSLKVF 213


>AC104665-1|AAY24115.1|  721|Homo sapiens unknown protein.
          Length = 721

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 63  IREISVNGSDYFRGTFSSHTGRISRIGVF 91
           IR+ S++ SD FR +FS   G +S + VF
Sbjct: 672 IRDGSLSRSDVFRDSFSHSPGAVSSLKVF 700


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.326    0.140    0.436 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,574,707
Number of Sequences: 224733
Number of extensions: 405811
Number of successful extensions: 400
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 397
Number of HSP's gapped (non-prelim): 3
length of query: 99
length of database: 73,234,838
effective HSP length: 76
effective length of query: 23
effective length of database: 56,155,130
effective search space: 1291567990
effective search space used: 1291567990
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 57 (27.1 bits)