GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000962-TA|BGIBMGA000962-PA|undefined
         (99 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II transm...    32   0.14 
DQ081230-1|AAZ30723.1|   48|Drosophila melanogaster Ten-a transc...    32   0.14 
DQ081229-1|AAZ30722.1|   48|Drosophila melanogaster Ten-a transc...    32   0.14 
DQ081228-1|AAZ30721.1|   48|Drosophila melanogaster Ten-a transc...    32   0.14 
DQ081227-1|AAZ30720.1|   64|Drosophila melanogaster Ten-a transc...    32   0.14 
AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-P...    32   0.14 

>X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II
          transmembrane protein protein.
          Length = 3004

 Score = 31.9 bits (69), Expect = 0.14
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 1  MTMKSLKYSEREDMMEGFS-XXXXXXXXXXXXXNIYAEPF 39
          MTMKS+KYS+ + +M+G++              NIYAEPF
Sbjct: 1  MTMKSMKYSDCDTIMDGYNPVPPPLPRRVPPVRNIYAEPF 40


>DQ081230-1|AAZ30723.1|   48|Drosophila melanogaster Ten-a
          transcript variant V protein.
          Length = 48

 Score = 31.9 bits (69), Expect = 0.14
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 1  MTMKSLKYSEREDMMEGFS-XXXXXXXXXXXXXNIYAEPF 39
          MTMKS+KYS+ + +M+G++              NIYAEPF
Sbjct: 1  MTMKSMKYSDCDTIMDGYNPVPPPLPRRVPPVRNIYAEPF 40


>DQ081229-1|AAZ30722.1|   48|Drosophila melanogaster Ten-a
          transcript variant IV protein.
          Length = 48

 Score = 31.9 bits (69), Expect = 0.14
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 1  MTMKSLKYSEREDMMEGFS-XXXXXXXXXXXXXNIYAEPF 39
          MTMKS+KYS+ + +M+G++              NIYAEPF
Sbjct: 1  MTMKSMKYSDCDTIMDGYNPVPPPLPRRVPPVRNIYAEPF 40


>DQ081228-1|AAZ30721.1|   48|Drosophila melanogaster Ten-a
          transcript variant III protein.
          Length = 48

 Score = 31.9 bits (69), Expect = 0.14
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 1  MTMKSLKYSEREDMMEGFS-XXXXXXXXXXXXXNIYAEPF 39
          MTMKS+KYS+ + +M+G++              NIYAEPF
Sbjct: 1  MTMKSMKYSDCDTIMDGYNPVPPPLPRRVPPVRNIYAEPF 40


>DQ081227-1|AAZ30720.1|   64|Drosophila melanogaster Ten-a
          transcript variant II protein.
          Length = 64

 Score = 31.9 bits (69), Expect = 0.14
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 1  MTMKSLKYSEREDMMEGFS-XXXXXXXXXXXXXNIYAEPF 39
          MTMKS+KYS+ + +M+G++              NIYAEPF
Sbjct: 1  MTMKSMKYSDCDTIMDGYNPVPPPLPRRVPPVRNIYAEPF 40


>AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-PA
          protein.
          Length = 3004

 Score = 31.9 bits (69), Expect = 0.14
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 1  MTMKSLKYSEREDMMEGFS-XXXXXXXXXXXXXNIYAEPF 39
          MTMKS+KYS+ + +M+G++              NIYAEPF
Sbjct: 1  MTMKSMKYSDCDTIMDGYNPVPPPLPRRVPPVRNIYAEPF 40


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.326    0.140    0.436 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,058,008
Number of Sequences: 52641
Number of extensions: 133936
Number of successful extensions: 211
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 205
Number of HSP's gapped (non-prelim): 6
length of query: 99
length of database: 24,830,863
effective HSP length: 73
effective length of query: 26
effective length of database: 20,988,070
effective search space: 545689820
effective search space used: 545689820
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 54 (25.8 bits)