GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000962-TA|BGIBMGA000962-PA|undefined
         (99 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        20   6.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        20   6.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        20   6.5  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    19   8.6  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 64  REISVNGSDYFRGTFSSHTGRISRIG 89
           +++ +N     RG  S HTG    +G
Sbjct: 131 KDLPINNVQGLRGLKSCHTGVGRNVG 156


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 64  REISVNGSDYFRGTFSSHTGRISRIG 89
           +++ +N     RG  S HTG    +G
Sbjct: 131 KDLPINNVQGLRGLKSCHTGVGRNVG 156


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 64  REISVNGSDYFRGTFSSHTGRISRIG 89
           +++ +N     RG  S HTG    +G
Sbjct: 131 KDLPINNVQGLRGLKSCHTGVGRNVG 156


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 7/9 (77%), Positives = 9/9 (100%)

Query: 4   KSLKYSERE 12
           KSLKYS++E
Sbjct: 510 KSLKYSDKE 518


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.326    0.140    0.436 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,409
Number of Sequences: 429
Number of extensions: 824
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 99
length of database: 140,377
effective HSP length: 49
effective length of query: 50
effective length of database: 119,356
effective search space:  5967800
effective search space used:  5967800
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.7 bits)
S2: 38 (19.4 bits)