GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000961-TA|BGIBMGA000961-PA|undefined
         (92 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8XS39 Cluster: Probable non ribosomal peptide syntheta...    31   3.4  
UniRef50_A4F6N3 Cluster: Putative uncharacterized protein; n=1; ...    31   4.5  

>UniRef50_Q8XS39 Cluster: Probable non ribosomal peptide synthetase
            protein; n=2; Proteobacteria|Rep: Probable non ribosomal
            peptide synthetase protein - Ralstonia solanacearum
            (Pseudomonas solanacearum)
          Length = 5953

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)

Query: 18   HKYSGARGSTETKMISLWLKALLAVETI 45
            H Y   R   ET++ S+W +ALL VETI
Sbjct: 5296 HSYEAPRSGIETRLASIW-QALLGVETI 5322


>UniRef50_A4F6N3 Cluster: Putative uncharacterized protein; n=1;
           Saccharopolyspora erythraea NRRL 2338|Rep: Putative
           uncharacterized protein - Saccharopolyspora erythraea
           (strain NRRL 23338)
          Length = 180

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 14/41 (34%), Positives = 25/41 (60%)

Query: 29  TKMISLWLKALLAVETIPQDHQCRVLQQDTRAPVTTGIRSL 69
           T ++++WL A L   T P++ + R L+++    +TTG  SL
Sbjct: 62  TPLLAVWLDAALHFCTGPEERKARNLERNAHCVLTTGRNSL 102


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.321    0.133    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,714,737
Number of Sequences: 1657284
Number of extensions: 2808682
Number of successful extensions: 5032
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5031
Number of HSP's gapped (non-prelim): 2
length of query: 92
length of database: 575,637,011
effective HSP length: 70
effective length of query: 22
effective length of database: 459,627,131
effective search space: 10111796882
effective search space used: 10111796882
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)