GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000961-TA|BGIBMGA000961-PA|undefined
         (92 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     22   4.1  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            21   9.5  

>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 36  LKALLAVETIPQDHQCRVLQQDTRAPVTTG 65
           +KALLA + + Q  Q +  QQ  +    TG
Sbjct: 643 IKALLATQQLQQQQQQQQQQQQQQQQGQTG 672


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/17 (35%), Positives = 13/17 (76%)

Query: 32   ISLWLKALLAVETIPQD 48
            +S+WL+ ++  ET+ +D
Sbjct: 1643 VSVWLEGVVVQETLLED 1659


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.133    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,704
Number of Sequences: 2123
Number of extensions: 2560
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 92
length of database: 516,269
effective HSP length: 54
effective length of query: 38
effective length of database: 401,627
effective search space: 15261826
effective search space used: 15261826
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 41 (20.6 bits)