GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000961-TA|BGIBMGA000961-PA|undefined
         (92 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X70040-1|CAA49634.1| 1400|Homo sapiens tyrosine kinase protein.        27   6.9  

>X70040-1|CAA49634.1| 1400|Homo sapiens tyrosine kinase protein.
          Length = 1400

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)

Query: 4   DPACRLIAGAGRTPHKYSGARGSTETKMISL 34
           DP C+  A  G  PH   G  G T+TK++ L
Sbjct: 98  DPGCQTCAACGPGPH---GPPGDTDTKVLVL 125


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.321    0.133    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,095,015
Number of Sequences: 224733
Number of extensions: 425823
Number of successful extensions: 529
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 529
Number of HSP's gapped (non-prelim): 1
length of query: 92
length of database: 73,234,838
effective HSP length: 70
effective length of query: 22
effective length of database: 57,503,528
effective search space: 1265077616
effective search space used: 1265077616
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)