GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000960-TA|BGIBMGA000960-PA|undefined
         (153 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB716B Cluster: PREDICTED: similar to Tenascin m...    33   3.6  

>UniRef50_UPI0000DB716B Cluster: PREDICTED: similar to Tenascin
           major CG5723-PB isoform 1; n=3; Endopterygota|Rep:
           PREDICTED: similar to Tenascin major CG5723-PB isoform 1
           - Apis mellifera
          Length = 3041

 Score = 32.7 bits (71), Expect = 3.6
 Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 14/66 (21%)

Query: 17  PPRYVSSPQRQASPFPLEST--------XXXXXXXXXXSKGEEIFSG-----DVGGGTLS 63
           PP  ++   RQASPFPLE+T                    GE +++        GGGTL 
Sbjct: 107 PPPTLTPNHRQASPFPLENTNSRRHHYNGSISSERSRNGNGETVYAAPSKKTSTGGGTLG 166

Query: 64  RR-RRG 68
           RR RRG
Sbjct: 167 RRTRRG 172


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.313    0.134    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,438,824
Number of Sequences: 1657284
Number of extensions: 4211186
Number of successful extensions: 4397
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4397
Number of HSP's gapped (non-prelim): 1
length of query: 153
length of database: 575,637,011
effective HSP length: 94
effective length of query: 59
effective length of database: 419,852,315
effective search space: 24771286585
effective search space used: 24771286585
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 68 (31.5 bits)