Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000959-TA|BGIBMGA000959-PA|IPR000054|Ribosomal protein
L31e
         (124 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   1.5  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    20   6.0  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    20   6.0  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    20   6.0  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    20   6.0  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    20   6.0  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 11  KSAINEVVTR--EYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMG 55
           K ++ EV+ R  + T  LH +   +  K R P+ +  I  +++K+ G
Sbjct: 491 KISVQEVLNRVRKPTKKLHLKNSPISKKVRPPQVLCYITSWSQKRPG 537


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 42  AIKEIRKFAEKQMGTPD 58
           A+K I+K+ +   GTPD
Sbjct: 175 ALKFIKKYIQHFGGTPD 191


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 42  AIKEIRKFAEKQMGTPD 58
           A+K I+K+ +   GTPD
Sbjct: 175 ALKFIKKYIQHFGGTPD 191


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 42  AIKEIRKFAEKQMGTPD 58
           A+K I+K+ +   GTPD
Sbjct: 175 ALKFIKKYIQHFGGTPD 191


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 42  AIKEIRKFAEKQMGTPD 58
           A+K I+K+ +   GTPD
Sbjct: 175 ALKFIKKYIQHFGGTPD 191


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 42  AIKEIRKFAEKQMGTPD 58
           A+K I+K+ +   GTPD
Sbjct: 175 ALKFIKKYIQHFGGTPD 191


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.132    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,721
Number of Sequences: 317
Number of extensions: 770
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 124
length of database: 114,650
effective HSP length: 50
effective length of query: 74
effective length of database: 98,800
effective search space:  7311200
effective search space used:  7311200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)
S2: 39 (19.8 bits)