Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000959-TA|BGIBMGA000959-PA|IPR000054|Ribosomal protein
L31e
(124 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27; Coelom... 233 5e-61
UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48; Metazo... 180 9e-45
UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173; Eukar... 177 6e-44
UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20; Coelom... 173 1e-42
UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1; ... 125 2e-28
UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12; Euka... 125 2e-28
UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal ... 118 2e-26
UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal ... 115 2e-25
UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9; Euteleostom... 110 8e-24
UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=... 105 2e-22
UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7; ... 103 1e-21
UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal ... 101 5e-21
UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2; ... 96 2e-19
UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7; Trypanosoma... 85 5e-16
UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal ... 84 6e-16
UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31... 83 1e-15
UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal ... 75 4e-13
UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6; ... 65 3e-10
UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lambl... 61 7e-09
UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, wh... 59 3e-08
UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7; Euryar... 50 2e-05
UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;... 49 3e-05
UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillar... 49 3e-05
UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:... 47 1e-04
UniRef50_A1RXF2 Cluster: Ribosomal protein L31e; n=1; Thermofilu... 47 1e-04
UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11; Eurya... 44 8e-04
UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5; Thermo... 42 0.003
UniRef50_Q00ZX3 Cluster: 60S ribosomal protein L31a; n=1; Ostreo... 42 0.003
UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1; ... 41 0.006
UniRef50_A0RW54 Cluster: Ribosomal protein L31E; n=2; Thermoprot... 40 0.010
UniRef50_O28213 Cluster: 50S ribosomal protein L31e; n=1; Archae... 40 0.013
UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropy... 40 0.018
UniRef50_Q8SSC8 Cluster: 60S ribosomal protein L31; n=1; Encepha... 38 0.054
UniRef50_Q0W5H1 Cluster: 50S ribosomal protein L31E; n=2; Euryar... 35 0.38
UniRef50_A0U399 Cluster: Putative uncharacterized protein; n=1; ... 34 0.88
UniRef50_Q820F4 Cluster: Holliday junction ATP-dependent DNA hel... 33 1.5
UniRef50_Q02B40 Cluster: HAD-superfamily hydrolase, subfamily IA... 33 2.0
UniRef50_A3DNH4 Cluster: 50S ribosomal protein L31e; n=2; Desulf... 33 2.0
UniRef50_Q9HM17 Cluster: 50S ribosomal protein L31e; n=3; Thermo... 33 2.0
>UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27;
Coelomata|Rep: 60S ribosomal protein L31 - Heliothis
virescens (Noctuid moth) (Owlet moth)
Length = 124
Score = 233 bits (571), Expect = 5e-61
Identities = 112/124 (90%), Positives = 113/124 (91%)
Query: 1 MAKPKGERTGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 60
MAKPKGER GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD+R
Sbjct: 1 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVR 60
Query: 61 VDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 120
VDTRLNKFLWSKGVRNVPF NDDEDSAHKLFTLVTYVPVASIKGLQTENVD
Sbjct: 61 VDTRLNKFLWSKGVRNVPFRVRVRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 120
Query: 121 ASQE 124
ASQE
Sbjct: 121 ASQE 124
>UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48;
Metazoa|Rep: 60S ribosomal protein L31 - Homo sapiens
(Human)
Length = 125
Score = 180 bits (437), Expect = 9e-45
Identities = 82/120 (68%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
Query: 2 AKPKGERT-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 60
AK GE+ G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 61 VDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 120
+DTRLNK +W+KG+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 64 IDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173;
Eukaryota|Rep: 60S ribosomal protein L31 - Drosophila
melanogaster (Fruit fly)
Length = 124
Score = 177 bits (430), Expect = 6e-44
Identities = 80/124 (64%), Positives = 99/124 (79%)
Query: 1 MAKPKGERTGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 60
M K KGE+ KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 61 VDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 120
+DTRLNK +WSKG+R+ PF NDDEDS +KL+T VTYVPV++ K LQTENV+
Sbjct: 61 IDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVE 120
Query: 121 ASQE 124
+S +
Sbjct: 121 SSDD 124
>UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20;
Coelomata|Rep: 60S ribosomal protein L31 - Aedes aegypti
(Yellowfever mosquito)
Length = 124
Score = 173 bits (420), Expect = 1e-42
Identities = 79/124 (63%), Positives = 100/124 (80%)
Query: 1 MAKPKGERTGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 60
MAK K E+ KSAINEVVTRE T+NL++RLH VG+KKRAPRA+K +RKFAEK+MGT D+R
Sbjct: 1 MAKTKTEKKAKSAINEVVTRECTINLNRRLHKVGYKKRAPRAVKIVRKFAEKEMGTNDVR 60
Query: 61 VDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 120
+DTRLNK LW +G+RN PF NDDEDS +KL+TLVTYVPV++ K LQTENV+
Sbjct: 61 IDTRLNKALWHRGIRNPPFRIRVRLSRRRNDDEDSPNKLYTLVTYVPVSTFKELQTENVE 120
Query: 121 ASQE 124
++++
Sbjct: 121 STED 124
>UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 175
Score = 125 bits (302), Expect = 2e-28
Identities = 62/117 (52%), Positives = 82/117 (70%), Gaps = 2/117 (1%)
Query: 5 KGERTGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTR 64
KG++T +SA+N+VVTREYTVNLHKR+H V FKKRAPRAIKE+ FA+K MGT D+R+D +
Sbjct: 58 KGKKT-RSALNDVVTREYTVNLHKRVHDVAFKKRAPRAIKEVVAFAQKAMGTKDVRLDPK 116
Query: 65 LNKFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFT-LVTYVPVASIKGLQTENVD 120
LN+ +W GV+N P NDDE + KL+T V + + + KGLQT +D
Sbjct: 117 LNQEVWKYGVKNFPRRLRVRLERKRNDDEGAKEKLYTYAVPVLGLGTAKGLQTTVID 173
>UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12;
Eukaryota|Rep: 60S ribosomal protein L31-3 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 119
Score = 125 bits (302), Expect = 2e-28
Identities = 59/112 (52%), Positives = 76/112 (67%), Gaps = 2/112 (1%)
Query: 11 KSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLW 70
K EV+TREYT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD +LNK +W
Sbjct: 5 KGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIW 64
Query: 71 SKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTY--VPVASIKGLQTENVD 120
SKG+R P NDDED+ + F+LVT +P + GL T+ ++
Sbjct: 65 SKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIE 116
>UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 130
Score = 118 bits (285), Expect = 2e-26
Identities = 48/61 (78%), Positives = 59/61 (96%)
Query: 19 TREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 78
TREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK +W+KG+RNVP
Sbjct: 60 TREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVP 119
Query: 79 F 79
+
Sbjct: 120 Y 120
>UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal
protein L31; n=2; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L31 - Canis familiaris
Length = 175
Score = 115 bits (277), Expect = 2e-25
Identities = 50/85 (58%), Positives = 66/85 (77%)
Query: 36 KKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEDS 95
+K RA+K+IRKFA K++GTPD+R+DTRLNK +W+KG+RNVP+ N+DEDS
Sbjct: 89 RKERRRALKDIRKFAMKELGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDS 148
Query: 96 AHKLFTLVTYVPVASIKGLQTENVD 120
+KL+TLVTYVPV ++K LQT NVD
Sbjct: 149 PNKLYTLVTYVPVTTLKNLQTVNVD 173
>UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9;
Euteleostomi|Rep: Ribosomal protein L31 - Pagrus major
(Red sea bream) (Chrysophrys major)
Length = 91
Score = 110 bits (264), Expect = 8e-24
Identities = 51/79 (64%), Positives = 60/79 (75%)
Query: 42 AIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFT 101
A IRKFA K+MGTPD+R+DTRLNK +WSKGVRNVP+ N+DEDS +KL+T
Sbjct: 11 APSRIRKFAVKEMGTPDVRMDTRLNKAVWSKGVRNVPYRMRVRLSRKRNEDEDSPNKLYT 70
Query: 102 LVTYVPVASIKGLQTENVD 120
LVTYVPV + KGLQT NVD
Sbjct: 71 LVTYVPVTTCKGLQTVNVD 89
>UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=1;
Tetrahymena thermophila SB210|Rep: 60S ribosomal protein
L31, putative - Tetrahymena thermophila SB210
Length = 111
Score = 105 bits (252), Expect = 2e-22
Identities = 48/99 (48%), Positives = 65/99 (65%)
Query: 23 TVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFXXX 82
TVNLHK+ H + FKK+APRAI+EI A+K MGT D+R+DT LNKF+WS G+RN+P
Sbjct: 12 TVNLHKQCHKISFKKKAPRAIREIVAIAKKTMGTDDVRIDTELNKFIWSNGIRNIPRRVR 71
Query: 83 XXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDA 121
N++E + + +TLV ++ V S GL TE A
Sbjct: 72 VRLCKRKNEEEGAQSQFYTLVQHLQVDSYHGLLTEKTKA 110
>UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7;
Apicomplexa|Rep: Ribosomal protein L31e, putative -
Plasmodium yoelii yoelii
Length = 142
Score = 103 bits (247), Expect = 1e-21
Identities = 49/99 (49%), Positives = 65/99 (65%)
Query: 19 TREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 78
T+ T+NL K H V +K++APRAIKEI+ A K M T D+R+D +LNKF+WSKG+RN P
Sbjct: 39 TKVITINLSKLTHDVCYKRKAPRAIKEIKNIAGKLMHTKDVRLDVKLNKFIWSKGIRNPP 98
Query: 79 FXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTE 117
N+DEDS +++TLV +V V S KGL E
Sbjct: 99 KRVRVKIERVRNEDEDSKERMYTLVQHVMVDSYKGLVNE 137
>UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal
protein L31, partial; n=1; Macaca mulatta|Rep:
PREDICTED: similar to ribosomal protein L31, partial -
Macaca mulatta
Length = 129
Score = 101 bits (241), Expect = 5e-21
Identities = 50/97 (51%), Positives = 66/97 (68%), Gaps = 3/97 (3%)
Query: 18 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNV 77
VTR YT N+ K + GVGFKKR P+A+KEI+KFA K+M T D+R+DTR NK +W+KG NV
Sbjct: 25 VTRGYTSNIQKHIRGVGFKKRGPQALKEIQKFAMKEMRTLDVRLDTRQNKAVWNKGTSNV 84
Query: 78 PFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGL 114
+ N + + HKL+TL+TYVPV + K L
Sbjct: 85 SW---VPICGFENMMKLNIHKLYTLITYVPVTTFKNL 118
>UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L31 - Entamoeba histolytica HM-1:IMSS
Length = 150
Score = 95.9 bits (228), Expect = 2e-19
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 18 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNV 77
+TRE T+++HK LH FKKRAP+AIK IR A K M T +++ D LN+F+WS+G+R+V
Sbjct: 46 ITREMTIHMHKYLHKESFKKRAPKAIKIIRFLAIKTMKTHNVKFDMGLNQFIWSQGIRSV 105
Query: 78 PFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQ 123
+ E+ K +TLV+YVPVAS KGL T+ V+ ++
Sbjct: 106 ADRIRVRMARLPMEGEEG--KFYTLVSYVPVASFKGLVTKTVEETE 149
>UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7;
Trypanosomatidae|Rep: Ribosomal protein L31 - Leishmania
major
Length = 188
Score = 84.6 bits (200), Expect = 5e-16
Identities = 46/115 (40%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 7 ERTGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLN 66
+RTG+ + V+ E T++L K L F KRAP AIK I+ F + M T D R+D LN
Sbjct: 75 KRTGRKP--DAVSMEATIHLSKLLKKKTFSKRAPLAIKRIKAFVGRLMKTKDNRIDASLN 132
Query: 67 KFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHK-LFTLVTYVPVASIKGLQTENVD 120
++W KGV+ VP E + HK +T+++ VPVAS KGL T+ V+
Sbjct: 133 TYIWHKGVKGVPGRVRVLIQRKSETTEGNKHKHFYTVISNVPVASFKGLTTKTVE 187
>UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L31 - Rattus norvegicus
Length = 163
Score = 84.2 bits (199), Expect = 6e-16
Identities = 39/62 (62%), Positives = 48/62 (77%)
Query: 2 AKPKGERTGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRV 61
AK G++ G SAINE+VTREYT+N+HKR+H VGFK AP A+KEI KFA K MGTP+ +
Sbjct: 4 AKKGGKKKGHSAINEMVTREYTINIHKRIHEVGFKMHAPWALKEIWKFAIKAMGTPEFVI 63
Query: 62 DT 63
T
Sbjct: 64 CT 65
>UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31
(RPL31C); n=1; Arabidopsis thaliana|Rep: 60S ribosomal
protein L31 (RPL31C) - Arabidopsis thaliana
Length = 85
Score = 83.0 bits (196), Expect = 1e-15
Identities = 37/52 (71%), Positives = 43/52 (82%)
Query: 11 KSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVD 62
K EV+TREYT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD
Sbjct: 5 KGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD 56
>UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 141
Score = 74.9 bits (176), Expect = 4e-13
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 34 GFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVR-NVPFXXXXXXXXXXNDD 92
GF++ P +KEIRKFA K+MGTPD+ +D NK + ++G+R NVP +D
Sbjct: 49 GFREACPSGLKEIRKFAMKEMGTPDVHMDPGFNKAVQAEGIRNNVPHRIPVRLSRKCKED 108
Query: 93 EDSAHKLFTLVTYVPVAS 110
EDS +KL+ LVT VPV +
Sbjct: 109 EDSPNKLYRLVTCVPVTT 126
>UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6;
Trichomonas vaginalis G3|Rep: Ribosomal protein L31e,
putative - Trichomonas vaginalis G3
Length = 133
Score = 65.3 bits (152), Expect = 3e-10
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 21 EYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFX 80
E T++L K +H + RA RAIK I A+K M T +++D LN +W G +N P
Sbjct: 34 ETTIHLQKAVHNTTRRFRAERAIKVITAAAKKMMHTEVVKIDPELNSRIWIHG-KNCPPA 92
Query: 81 XXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENV 119
D+ED A K+ T+ +Y VAS GLQT+ V
Sbjct: 93 RVRVVFERKADEED-AEKMVTIASYKNVASFNGLQTQKV 130
>UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_16236_15916 - Giardia lamblia
ATCC 50803
Length = 106
Score = 60.9 bits (141), Expect = 7e-09
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 18 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNV 77
+ E+T+ L+K + G KK AP AI+ IR EK D+R+D +N F+WS+G+R+V
Sbjct: 3 IVYEHTIRLNKAVRGKPSKKAAPIAIRAIRAQVEKLAKVEDVRLDPSVNVFVWSRGIRHV 62
Query: 78 PFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTE 117
P DDE HK F V V + K L TE
Sbjct: 63 P-RRIRLEVRLEGDDE---HK-FAYVINKDVENFKHLTTE 97
>UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, whole
genome shotgun sequence; n=9; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_24,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 372
Score = 58.8 bits (136), Expect = 3e-08
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 36 KKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEDS 95
KKR + + A K M T D+R+D LN+ +W++G+RN+P +++D
Sbjct: 286 KKRPQKLSLILLISARKNMLTEDVRIDPSLNEAVWARGIRNLPRRIRVRLQRKKKEEDDG 345
Query: 96 AHKLFTLVTYVPVASIKGLQTE 117
K +TL +VPV + GL+TE
Sbjct: 346 KGKYYTLAQHVPVDTFDGLKTE 367
>UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanococcus jannaschii
Length = 87
Score = 49.6 bits (113), Expect = 2e-05
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 20 REYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 78
R YT+ L ++ KRAPRAIK+I++F ++ M +++D LN+ +W +G++ P
Sbjct: 9 RIYTIPLRDVINKSVRTKRAPRAIKKIKQFLKRHMKAEIVKIDNELNEKIWERGIQKPP 67
>UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L31E - Ignicoccus hospitalis KIN4/I
Length = 101
Score = 48.8 bits (111), Expect = 3e-05
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 22 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP--DIRVDTRLNKFLWSKGVRNVPF 79
YT+NL +RL+ RA RA++ +R+F + G D+++D +N +LWS + P
Sbjct: 10 YTINL-RRLYWGRRSNRAKRAVRMVREFVARHFGVEPEDVKIDNTVNNYLWSGSITKPPA 68
Query: 80 XXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQ 115
E+ K V YV +A++K ++
Sbjct: 69 RVQVYVTVKTESGEEGERK----VAYVTLANVKDVE 100
>UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1;
Guillardia theta|Rep: 60S ribosomal protein L31 -
Guillardia theta (Cryptomonas phi)
Length = 97
Score = 48.8 bits (111), Expect = 3e-05
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 25 NLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 78
N+HKR+ G F KR AIKEI+KFA K +IR++ LN + S G N P
Sbjct: 15 NIHKRVFGKKFNKRVSIAIKEIKKFAWKLTKCNNIRIEPELNMQICSNGSSNPP 68
>UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:
NEQ364 - Nanoarchaeum equitans
Length = 79
Score = 46.8 bits (106), Expect = 1e-04
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 21 EYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 78
EYTVNL K + KR +A+K +++F + +++ LNKF+W +G R P
Sbjct: 2 EYTVNLRKAVLVTSRFKRTKKAVKALKEFVMRHTKAKIVKISQELNKFIWKRGGRKPP 59
>UniRef50_A1RXF2 Cluster: Ribosomal protein L31e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L31e - Thermofilum
pendens (strain Hrk 5)
Length = 103
Score = 46.8 bits (106), Expect = 1e-04
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 10 GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD-IRVDTRLNKF 68
GK A E TR Y +NL +R++ KKRA A++ IR F + + PD I++ LN
Sbjct: 3 GKMADGEY-TRTYVINL-RRVYSAPRKKRAKVAVRAIRDFIARHLRFPDRIKISPELNLI 60
Query: 69 LWSKGVRNVP 78
+WS+ + P
Sbjct: 61 VWSRSIEKPP 70
>UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 93
Score = 44.0 bits (99), Expect = 8e-04
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 10 GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLNK 67
GK A + V + YT+ L + + V KRA RA+KE+R F + M T +++D +N+
Sbjct: 3 GKMADDMVKEQIYTIPL-REVRKVPAWKRAGRAVKEVRGFLVRHMKTEAEQVKLDKTINE 61
Query: 68 FLWSKGVRNVP 78
LW KG P
Sbjct: 62 CLWEKGCEKPP 72
>UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5;
Thermococcaceae|Rep: 50S ribosomal protein L31e -
Pyrococcus furiosus
Length = 95
Score = 42.3 bits (95), Expect = 0.003
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 22 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 78
+TV + K V KRAPRA+K +R+F + ++ +D ++N+ +W +G+ P
Sbjct: 11 FTVPIKKIKKIVPRWKRAPRAVKFVREFVARHAKAQEVIIDPKVNEKIWERGIEKPP 67
>UniRef50_Q00ZX3 Cluster: 60S ribosomal protein L31a; n=1;
Ostreococcus tauri|Rep: 60S ribosomal protein L31a -
Ostreococcus tauri
Length = 95
Score = 41.9 bits (94), Expect = 0.003
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 54 MGTPDIRVDTRLNKFLWSKGVRNVPF 79
M T D+R+D +LNK +WSKG+RNV F
Sbjct: 1 MKTSDVRIDVKLNKAVWSKGIRNVRF 26
>UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 93
Score = 41.1 bits (92), Expect = 0.006
Identities = 20/30 (66%), Positives = 23/30 (76%), Gaps = 3/30 (10%)
Query: 3 KPKGERTGKSAINEVVTREYTVNLHKRLHG 32
K +G T K +EVVTREYT+NLHKRLHG
Sbjct: 4 KKRGAGTRK---DEVVTREYTINLHKRLHG 30
>UniRef50_A0RW54 Cluster: Ribosomal protein L31E; n=2;
Thermoprotei|Rep: Ribosomal protein L31E - Cenarchaeum
symbiosum
Length = 217
Score = 40.3 bits (90), Expect = 0.010
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 20 REYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 78
R YT+ L K L +RA RAI I++FA M +IR+D ++ +W +G+++ P
Sbjct: 7 RVYTIPLGKVLLSPD-NRRAMRAINMIKEFATHHMKNANIRIDEEVSHQIWLRGIKSPP 64
>UniRef50_O28213 Cluster: 50S ribosomal protein L31e; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L31e
- Archaeoglobus fulgidus
Length = 88
Score = 39.9 bits (89), Expect = 0.013
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 17 VVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLNKFLWSKGV 74
VV R Y++ L ++ RA +A K +RKF + M ++++DT +N+ +W +G
Sbjct: 5 VVERVYSIRLRHKMKRYPRWLRAKKAAKYVRKFLSRHMKVEPENVKIDTAVNEKIWERGA 64
Query: 75 RNVP 78
P
Sbjct: 65 EKPP 68
>UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1;
Aeropyrum pernix|Rep: 50S ribosomal protein L31e -
Aeropyrum pernix
Length = 104
Score = 39.5 bits (88), Expect = 0.018
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 22 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFXX 81
Y VNL +R++ +RA RA++ +R+F + ++ +D LN ++WS+ P
Sbjct: 9 YVVNL-RRVYWGRRTRRAIRAVRMVREFVRRHTKADEVVIDNELNNYIWSRSREKPPARV 67
Query: 82 XXXXXXXXNDDEDSAHKL 99
+ E+ ++
Sbjct: 68 KIIVSIREEEPEEGGERI 85
>UniRef50_Q8SSC8 Cluster: 60S ribosomal protein L31; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L31
- Encephalitozoon cuniculi
Length = 111
Score = 37.9 bits (84), Expect = 0.054
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 12 SAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP-DIRVDTRLNKFLW 70
S I E T E TVNL + + + K+A + ++ +++ +K + V LN FL+
Sbjct: 3 SKIEENQTVEMTVNLRRICSRLPWTKKASKVVRMLKREIQKHFREEIGVVVTNDLNNFLY 62
Query: 71 SKGVRNVP 78
S+G++ +P
Sbjct: 63 SRGIKKIP 70
>UniRef50_Q0W5H1 Cluster: 50S ribosomal protein L31E; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L31E -
Uncultured methanogenic archaeon RC-I
Length = 91
Score = 35.1 bits (77), Expect = 0.38
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 15 NEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD--IRVDTRLNKFLWSK 72
N+ + YT+ L + + KR+ +AIK IR++ K M + I++ + LN+ +W
Sbjct: 5 NKATEQIYTIPL-REVKDYPVWKRSNKAIKVIREYLSKHMKIEEEKIKISSELNEAVWEH 63
Query: 73 GVRNVP 78
G+ P
Sbjct: 64 GIEKPP 69
>UniRef50_A0U399 Cluster: Putative uncharacterized protein; n=1;
Burkholderia cenocepacia MC0-3|Rep: Putative
uncharacterized protein - Burkholderia cenocepacia MC0-3
Length = 1122
Score = 33.9 bits (74), Expect = 0.88
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 27 HKRLHGVGFKK-RAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 67
H+RLH VG + RA RA + R+ A + G PD R D R+++
Sbjct: 112 HERLHRVGLSEGRAGRAGRAHRRGARARRGLPDQRADGRVDR 153
>UniRef50_Q820F4 Cluster: Holliday junction ATP-dependent DNA
helicase ruvA; n=6; Actinomycetales|Rep: Holliday
junction ATP-dependent DNA helicase ruvA - Streptomyces
avermitilis
Length = 203
Score = 33.1 bits (72), Expect = 1.5
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 1 MAKPKGERTGKSAINEVVTREYTVNLHKRLHGVGFKKR-APRAIKEIRKFAEKQMGTPDI 59
+ +P G TG AI VT + LH L G+G+ R A A+ + AE GTP +
Sbjct: 131 LGEPLG--TGGPAIGRAVTTGWREQLHAALIGLGYATREADEAVAAVAPQAEAAGGTPQV 188
>UniRef50_Q02B40 Cluster: HAD-superfamily hydrolase, subfamily IA,
variant 3; n=1; Solibacter usitatus Ellin6076|Rep:
HAD-superfamily hydrolase, subfamily IA, variant 3 -
Solibacter usitatus (strain Ellin6076)
Length = 202
Score = 32.7 bits (71), Expect = 2.0
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 22 YTV-NLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWS 71
YT + KRL G G +R + E R F E+ T D+RVD +WS
Sbjct: 31 YTAAEIPKRLAGTGLVERFETGLMEPRDFVEEMSRTLDLRVDYDQFSQIWS 81
>UniRef50_A3DNH4 Cluster: 50S ribosomal protein L31e; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L31e -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 102
Score = 32.7 bits (71), Expect = 2.0
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 18 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD-IRVDTRLNKFLWSKGVRN 76
+TR V KR++ RA RA++ IRK+ + + I +D +N+++WS+
Sbjct: 7 ITRSIHVIPLKRVYWGRRTNRADRAVRLIRKYVRRHFKEAEKIIIDPAVNEYVWSRSREK 66
Query: 77 VP 78
P
Sbjct: 67 PP 68
>UniRef50_Q9HM17 Cluster: 50S ribosomal protein L31e; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L31e -
Thermoplasma acidophilum
Length = 89
Score = 32.7 bits (71), Expect = 2.0
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 15 NEVVTREYTVNLHKR-LHGVGFKKRAPRAIKEIRKFAEKQM--GTPDIRVDTRLNKFLWS 71
+E V +E +N+ R K+RA A+ +R F K+M I +D ++++ +W
Sbjct: 3 DETVAQEVIINVPLRDAKASSRKRRADTAVSILRNFVSKKMKIDKGKIWIDPKVSEKIWE 62
Query: 72 KGVRNVP 78
+G ++P
Sbjct: 63 RGREHIP 69
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.316 0.132 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,560,535
Number of Sequences: 1657284
Number of extensions: 3916064
Number of successful extensions: 6297
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 6258
Number of HSP's gapped (non-prelim): 39
length of query: 124
length of database: 575,637,011
effective HSP length: 91
effective length of query: 33
effective length of database: 424,824,167
effective search space: 14019197511
effective search space used: 14019197511
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 66 (30.7 bits)
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