GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000959-TA|BGIBMGA000959-PA|IPR000054|Ribosomal protein
L31e
         (124 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    25   1.0  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    24   1.3  
AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450 pr...    22   7.2  

>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 8/20 (40%), Positives = 14/20 (70%)

Query: 28  KRLHGVGFKKRAPRAIKEIR 47
           +RLH  GF  R PR +++++
Sbjct: 96  RRLHAAGFCARRPRKVRKLQ 115


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
          protein.
          Length = 260

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 28 KRLHGVGFKKRAPRAIKEI 46
          +RLH  GF  R PR ++++
Sbjct: 24 RRLHAAGFCARRPRKVRKL 42


>AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query: 6   GERTGKSAINEVVTREY 22
           GE  GK ++NE+V + +
Sbjct: 284 GEEVGKLSLNEIVAQAF 300


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.132    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,090
Number of Sequences: 2123
Number of extensions: 3030
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 124
length of database: 516,269
effective HSP length: 57
effective length of query: 67
effective length of database: 395,258
effective search space: 26482286
effective search space used: 26482286
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 43 (21.4 bits)