Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000958-TA|BGIBMGA000958-PA|IPR002524|Cation efflux
protein, IPR009061|Putative DNA binding
(436 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g51610.1 68414.m05814 cation efflux family protein / metal to... 255 5e-68
At2g47830.2 68415.m05970 cation efflux family protein / metal to... 40 0.002
At2g47830.1 68415.m05969 cation efflux family protein / metal to... 40 0.002
At2g04620.1 68415.m00470 cation efflux family protein potential ... 40 0.003
At1g79520.1 68414.m09270 cation efflux family protein contains c... 33 0.37
At2g39450.1 68415.m04842 cation efflux family protein contains c... 32 0.65
At1g67580.1 68414.m07699 protein kinase family protein contains ... 32 0.86
At1g16310.1 68414.m01952 cation efflux family protein contains c... 32 0.86
At5g05270.2 68418.m00566 chalcone-flavanone isomerase family pro... 30 2.6
At5g05270.1 68418.m00565 chalcone-flavanone isomerase family pro... 30 2.6
At2g22250.2 68415.m02642 aminotransferase class I and II family ... 30 2.6
At2g22250.1 68415.m02641 aminotransferase class I and II family ... 30 2.6
At1g10510.1 68414.m01183 leucine-rich repeat family protein simi... 30 2.6
At3g58810.2 68416.m06555 zinc transporter, putative similar to z... 29 4.6
At3g58810.1 68416.m06554 zinc transporter, putative similar to z... 29 4.6
At2g29410.1 68415.m03574 zinc transporter, putative similar to z... 29 4.6
At5g24360.1 68418.m02872 protein kinase family protein / Ire1 ho... 29 6.1
At3g23840.1 68416.m02997 transferase family protein low similari... 29 6.1
At5g39210.1 68418.m04749 expressed protein 29 8.0
>At1g51610.1 68414.m05814 cation efflux family protein / metal
tolerance protein, putative (MTPc4) member of the cation
diffusion facilitator (CDF) family, or cation efflux
(CE) family, PMID:11500563
Length = 457
Score = 255 bits (624), Expect = 5e-68
Identities = 129/350 (36%), Positives = 213/350 (60%), Gaps = 5/350 (1%)
Query: 89 TRSKDNVEEVGLKTR-SGRVVLTAIGINGCNFLFKLCAWFYTGSHSLFSECIHSLADTVN 147
TR+K V+ + + + S R V TA+ N F K W+ + SH + +E +HS+AD N
Sbjct: 98 TRAKQ-VKRIEINDQHSQRAVTTALWCNFLVFSLKFGVWWTSSSHVIMAEVVHSVADFAN 156
Query: 148 QLILAYGIHKSVQMADPDHPYGYTNMRYVSSLISGVGIFCVGSGLSFYHGVTGILDPQPL 207
Q +LAYG+ S + D HPYGY+ R+V SLIS VGIFC+GSG + +GV + P
Sbjct: 157 QALLAYGLSSSRRAPDALHPYGYSKERFVWSLISAVGIFCLGSGATIVNGVQNLWTSSPP 216
Query: 208 HDFYWAYFVLGGAVVSEGATLMVALSAIRKGAREANMSLYEYVMRSSDPSVNVVLLEDTA 267
+ A V+GG+ + EGA+L+VA+ +++KGA + M++ +Y+ R DP+ V+ ED A
Sbjct: 217 PNMELAAVVIGGSFLIEGASLLVAIQSVKKGAAQEGMTIRDYIWRGHDPTSVAVMTEDGA 276
Query: 268 AVAGVIVAASCMAISQYTGNPLPDALGSILVGTILGGVASFIILSNVGALVGRSIPHEQL 327
AVAG+ +AA+ + + TGNP+ D +GSI+VG +LG VA F+I N AL+GR++ + +
Sbjct: 277 AVAGLAIAAASLVAVRMTGNPIYDPIGSIVVGNLLGMVAIFLIQRNRHALIGRAMDDQDM 336
Query: 328 DEINSVLERDFMIRAIHDVKGIDIGSNLIRYKAEVDFDGRALTRSYLE---KHDLNALLE 384
++ L D ++ +++D K IG R+KAE+DF+G+ + ++YL+ + + +
Sbjct: 337 SKVLKFLRNDSVVDSLYDCKSEVIGPGSFRFKAEIDFNGQMVVQNYLKRTGREEWAKMFR 396
Query: 385 DMKKIDTIDDVETFLLKHGENIVDMLGGEIDRIELKLRKKFPQIRHCDLE 434
+ K + + +GE +V LG E+DR+E ++++ P I+H D+E
Sbjct: 397 EAAKNGDDSAMLNIMSNYGEEVVTALGSEVDRLEKEIQELVPGIQHVDIE 446
>At2g47830.2 68415.m05970 cation efflux family protein / metal
tolerance protein, putative (MTPc1) member of the cation
diffusion facilitator (CDF) family, or cation efflux
(CE) family, PMID:11500563
Length = 468
Score = 40.3 bits (90), Expect = 0.002
Identities = 45/242 (18%), Positives = 104/242 (42%), Gaps = 18/242 (7%)
Query: 122 KLCAWFYTGSHSLFSECIHSLADTVNQLILAYGIHKSVQMADPDHPYGYTNMRYVSSLIS 181
K + GS ++ ++ HS++D V + + D +HPYG+ + +L
Sbjct: 91 KALTGYLCGSTAIIADAAHSVSDVVLSGVALVSYRAANVPKDKEHPYGHGKFETLGALGI 150
Query: 182 GVGIFCVGSGLSFYH----GVTGILDPQPLHDFYWAYFVLGGAVVSEGATLMVALSAIRK 237
+ GSG++++ + P+ +H + + +++ T+ +A +I++
Sbjct: 151 SAMLLATGSGIAWHALDLLSIALSAAPEVIHSGHHHGIDMNHPILA--LTVTIASISIKE 208
Query: 238 GAREANMSLYEYVMRSSDPSVNVVLLEDTAAVAGVIVAASCMAISQYTGNPLP----DAL 293
G LY R+ + + +++ + + +S +A+ G+ L D L
Sbjct: 209 G-------LYWITKRAGEKQGSGLMMANAWHHRSDAI-SSLVALVGVGGSILGVNFLDPL 260
Query: 294 GSILVGTILGGVASFIILSNVGALVGRSIPHEQLDEINSVLERDFMIRAIHDVKGIDIGS 353
++V T++ ++ LV +IP +QL+ I + + ++ H ++G GS
Sbjct: 261 AGLVVSTMIVNAGLKTGHQSILELVDAAIPAQQLEPIRQTILQVEGVKGCHRLRGRRAGS 320
Query: 354 NL 355
+L
Sbjct: 321 SL 322
>At2g47830.1 68415.m05969 cation efflux family protein / metal
tolerance protein, putative (MTPc1) member of the cation
diffusion facilitator (CDF) family, or cation efflux
(CE) family, PMID:11500563
Length = 471
Score = 40.3 bits (90), Expect = 0.002
Identities = 45/242 (18%), Positives = 104/242 (42%), Gaps = 18/242 (7%)
Query: 122 KLCAWFYTGSHSLFSECIHSLADTVNQLILAYGIHKSVQMADPDHPYGYTNMRYVSSLIS 181
K + GS ++ ++ HS++D V + + D +HPYG+ + +L
Sbjct: 91 KALTGYLCGSTAIIADAAHSVSDVVLSGVALVSYRAANVPKDKEHPYGHGKFETLGALGI 150
Query: 182 GVGIFCVGSGLSFYH----GVTGILDPQPLHDFYWAYFVLGGAVVSEGATLMVALSAIRK 237
+ GSG++++ + P+ +H + + +++ T+ +A +I++
Sbjct: 151 SAMLLATGSGIAWHALDLLSIALSAAPEVIHSGHHHGIDMNHPILA--LTVTIASISIKE 208
Query: 238 GAREANMSLYEYVMRSSDPSVNVVLLEDTAAVAGVIVAASCMAISQYTGNPLP----DAL 293
G LY R+ + + +++ + + +S +A+ G+ L D L
Sbjct: 209 G-------LYWITKRAGEKQGSGLMMANAWHHRSDAI-SSLVALVGVGGSILGVNFLDPL 260
Query: 294 GSILVGTILGGVASFIILSNVGALVGRSIPHEQLDEINSVLERDFMIRAIHDVKGIDIGS 353
++V T++ ++ LV +IP +QL+ I + + ++ H ++G GS
Sbjct: 261 AGLVVSTMIVNAGLKTGHQSILELVDAAIPAQQLEPIRQTILQVEGVKGCHRLRGRRAGS 320
Query: 354 NL 355
+L
Sbjct: 321 SL 322
>At2g04620.1 68415.m00470 cation efflux family protein potential
member of the cation diffusion facilitator (CDF) family,
or cation efflux (CE) family, see PMID:11500563
Length = 798
Score = 39.9 bits (89), Expect = 0.003
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 1/124 (0%)
Query: 100 LKTRSGRVVLTAIGINGCNFLFKLCAWFYTGSHSLFSECIHSLADTVNQLILAYGIHKSV 159
L + R + + IN + + A F + S L S+ H L D I Y + S
Sbjct: 412 LSEKKSRKIALFLLINTAYMVVEFVAGFMSNSLGLISDACHMLFDCAALAIGLYASYISR 471
Query: 160 QMADPDHPYGYTNMRYVSSLISGVGIFCVGSGLSFYHGVTGILDPQPLHDFYWAYFVLGG 219
A+ + YG +S ++ V + VG+ L + ILDPQ + +GG
Sbjct: 472 LPANHQYNYGRGRFEVLSGYVNAVFLVLVGA-LIVLESIERILDPQEISTNSLLVVSVGG 530
Query: 220 AVVS 223
+V+
Sbjct: 531 LLVN 534
>At1g79520.1 68414.m09270 cation efflux family protein contains
cation efflux family protein domain, Pfam:PF01545
Length = 402
Score = 33.1 bits (72), Expect = 0.37
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 291 DALGSILVGTILGGVASFIILSNVGALVGRSIPHEQLDEINSVL-ERDFMIRAIHDVKGI 349
D G+IL+ + +L NV +L+GRS P + L ++ ++ I+ I V+
Sbjct: 282 DPSGAILIALYTISTWARTVLENVHSLIGRSAPPDFLAKLTFLIWNHHEKIKHIDTVRAY 341
Query: 350 DIGSNLIRYKAEVDFDGRALTRSYLEKHDLNALLEDMKKIDTIDDVE 396
GS+ Y EVD R + E H++ L++ K++ + +VE
Sbjct: 342 TFGSH---YFVEVDIVLPEDMRLH-EAHNIGETLQE--KLEQLSEVE 382
>At2g39450.1 68415.m04842 cation efflux family protein contains
cation efflux family protein domain, Pfam:PF01545
Length = 394
Score = 32.3 bits (70), Expect = 0.65
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 291 DALGSILVGTILGGVASFIILSNVGALVGRSIPHEQLDEINSVL-ERDFMIRAIHDVKGI 349
D +G+I++ S +L NV +LVG+S E L ++ + IR I V+
Sbjct: 273 DPVGAIILALYTIRTWSMTVLENVNSLVGKSARPEYLQKLTYLCWNHHKAIRHIDTVRAY 332
Query: 350 DIGSNLIRYKAEVDFDGRALTRSYLEKHDLNALLEDMKKIDTIDDVE 396
GS+ Y EVD A HD+ L++ K++ ++++E
Sbjct: 333 TFGSH---YFVEVDIVLPA-DMPLQVAHDIGESLQE--KLELLEEIE 373
>At1g67580.1 68414.m07699 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 752
Score = 31.9 bits (69), Expect = 0.86
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 323 PHEQLDEINSVLERDFMIRAIHDVKGIDIGSNLIRYKAEVDFDGRALTRSYLEKHDLNAL 382
P L EIN +L F +I DVK + +GS+L D + Y+E HDL AL
Sbjct: 447 PLTSLREINILLS--FHHPSIVDVKEVVVGSSL---------DSIFMVMEYME-HDLKAL 494
Query: 383 LEDMKKIDTIDDVETFLLKHGENI 406
+E MK+ + +V+ +L+ E +
Sbjct: 495 METMKQRFSQSEVKCLMLQLLEGV 518
>At1g16310.1 68414.m01952 cation efflux family protein contains
cation efflux family protein domain, Pfam:PF01545
Length = 428
Score = 31.9 bits (69), Expect = 0.86
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 291 DALGSILVGTILGGVASFIILSNVGALVGRSIPHEQLDEINSVL-ERDFMIRAIHDVKGI 349
D G+IL+ + +L NV +L+GRS P + L ++ ++ I+ I V+
Sbjct: 309 DPTGAILIALYTIATWARTVLENVHSLIGRSAPPDFLAKLTFLIWNHHEQIKHIDTVRAY 368
Query: 350 DIGSNLIRYKAEVDFDGRALTRSYLEKHDLNALLEDMKKIDTIDDVE 396
GS+ Y EVD R E H++ L++ K++ + +VE
Sbjct: 369 TFGSH---YFVEVDIVLPEDMR-LQEAHNIGETLQE--KLEQLAEVE 409
>At5g05270.2 68418.m00566 chalcone-flavanone isomerase family
protein contains very low similarity to
chalcone-flavonone isomerase (chalcone isomerase),
GI:1705761 from Vitis vinifera; contains Pfam profile
PF02431: Chalcone-flavanone isomerase
Length = 209
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 88 HTRSKDNVEEVGLKTRSGRVVLTAIGINGCNFLFKLCAWFYTGSHSLFSECIHSLADTVN 147
H +KD + E+G +T + + N + + W+ +GS + I S+AD+++
Sbjct: 148 HFSAKDGICEIGFETEGKEE--EKLKVENANVVGMMQRWYLSGSRGVSPSTIVSIADSIS 205
Query: 148 QLI 150
++
Sbjct: 206 AVL 208
>At5g05270.1 68418.m00565 chalcone-flavanone isomerase family
protein contains very low similarity to
chalcone-flavonone isomerase (chalcone isomerase),
GI:1705761 from Vitis vinifera; contains Pfam profile
PF02431: Chalcone-flavanone isomerase
Length = 209
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 88 HTRSKDNVEEVGLKTRSGRVVLTAIGINGCNFLFKLCAWFYTGSHSLFSECIHSLADTVN 147
H +KD + E+G +T + + N + + W+ +GS + I S+AD+++
Sbjct: 148 HFSAKDGICEIGFETEGKEE--EKLKVENANVVGMMQRWYLSGSRGVSPSTIVSIADSIS 205
Query: 148 QLI 150
++
Sbjct: 206 AVL 208
>At2g22250.2 68415.m02642 aminotransferase class I and II family
protein similar to aspartate aminotransferase from
Bacillus stearothermophilus SP|Q59228, Thermus aquaticus
SP|O33822; contains Pfam profile PF00155
aminotransferase, classes I and II
Length = 475
Score = 30.3 bits (65), Expect = 2.6
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 295 SILVGTILGGVASFIILSNVGAL-VGRSIPHEQLDEINSVLER-DFMIRAIHDVKGIDIG 352
S L G + G +S + V AL +G++ + + + ER DF+++++ D+KG+ I
Sbjct: 329 SKLQGQVSSGASSIAQKAGVAALGLGKAGGETVAEMVKAYRERRDFLVKSLGDIKGVKIS 388
Query: 353 SNLIRYKAEVDF 364
+ +DF
Sbjct: 389 EPQGAFYLFIDF 400
>At2g22250.1 68415.m02641 aminotransferase class I and II family
protein similar to aspartate aminotransferase from
Bacillus stearothermophilus SP|Q59228, Thermus aquaticus
SP|O33822; contains Pfam profile PF00155
aminotransferase, classes I and II
Length = 428
Score = 30.3 bits (65), Expect = 2.6
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 295 SILVGTILGGVASFIILSNVGAL-VGRSIPHEQLDEINSVLER-DFMIRAIHDVKGIDIG 352
S L G + G +S + V AL +G++ + + + ER DF+++++ D+KG+ I
Sbjct: 282 SKLQGQVSSGASSIAQKAGVAALGLGKAGGETVAEMVKAYRERRDFLVKSLGDIKGVKIS 341
Query: 353 SNLIRYKAEVDF 364
+ +DF
Sbjct: 342 EPQGAFYLFIDF 353
>At1g10510.1 68414.m01183 leucine-rich repeat family protein similar
to ribonuclease inhibitor (GI:164639) [Sus scrofa
(pig)]; contains Pfam PF00560: Leucine Rich Repeat
domains
Length = 605
Score = 30.3 bits (65), Expect = 2.6
Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 11/134 (8%)
Query: 247 YEYVMRSSDPSVNVVLLEDTAAVAGVIVAASCMAISQYTGNPLPDALGSILVGTILGGVA 306
Y + S N + A GV+ + + I +GNP+ D L T++ +
Sbjct: 196 YNQTVEEVSFSANGITAAGVKAFDGVLQSNIMLKILNLSGNPIGDEGAKTLCATLMEN-S 254
Query: 307 SFIILSNVGALVGRSIPHEQLDEINSVLERDFMIRAIHDVKGIDIGSNLIRYKAEVDFDG 366
S IL L I E EI +L+R+ +R I++ +N+I Y G
Sbjct: 255 SIEILQ----LNSTDIGDEGAKEIAELLKRNSTLRI------IELNNNMIDYSGFTSLAG 304
Query: 367 RALTRSYLEKHDLN 380
L + + LN
Sbjct: 305 ALLENNTIRNLHLN 318
>At3g58810.2 68416.m06555 zinc transporter, putative similar to zinc
transporter 4; ZnT4 [Mus musculus]
gi|2582990|gb|AAB82593; similar to zinc transporter ZAT
[Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of
the cation diffusion facilitator (CDF) family, or cation
efflux (CE) family, PMID:11500563
Length = 393
Score = 29.5 bits (63), Expect = 4.6
Identities = 20/108 (18%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 91 SKDNVEEVGLKTRSGRVVLTAIGINGCNFLFKLCAWFYTGSHSLFSECIHSLADTVNQLI 150
+K + E + S R +L A+ + + ++ S ++ ++ H L+D I
Sbjct: 57 AKTSSIEAQERAASMRKLLIAVLLCAIFIVVEVVGGIKANSLAILTDAAHLLSDVAAFAI 116
Query: 151 LAYGIHKSVQMADPDHPYGYTNMRYVSSLISGVGIFCVGSGLSFYHGV 198
+ + S A+P YG+ + + +L+S + + + +G+ Y +
Sbjct: 117 SLFSLWASGWKANPQQSYGFFRIEILGALVS-IQMIWLLAGILVYEAI 163
>At3g58810.1 68416.m06554 zinc transporter, putative similar to zinc
transporter 4; ZnT4 [Mus musculus]
gi|2582990|gb|AAB82593; similar to zinc transporter ZAT
[Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of
the cation diffusion facilitator (CDF) family, or cation
efflux (CE) family, PMID:11500563
Length = 432
Score = 29.5 bits (63), Expect = 4.6
Identities = 20/108 (18%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 91 SKDNVEEVGLKTRSGRVVLTAIGINGCNFLFKLCAWFYTGSHSLFSECIHSLADTVNQLI 150
+K + E + S R +L A+ + + ++ S ++ ++ H L+D I
Sbjct: 96 AKTSSIEAQERAASMRKLLIAVLLCAIFIVVEVVGGIKANSLAILTDAAHLLSDVAAFAI 155
Query: 151 LAYGIHKSVQMADPDHPYGYTNMRYVSSLISGVGIFCVGSGLSFYHGV 198
+ + S A+P YG+ + + +L+S + + + +G+ Y +
Sbjct: 156 SLFSLWASGWKANPQQSYGFFRIEILGALVS-IQMIWLLAGILVYEAI 202
>At2g29410.1 68415.m03574 zinc transporter, putative similar to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; similar to zinc transporter
ZnT-2 [Rattus norvegicus] gi|1256378|gb|AAB02775; member
of the cation diffusion facilitator (CDF) family, or
cation efflux (CE) family, PMID:11500563
Length = 375
Score = 29.5 bits (63), Expect = 4.6
Identities = 22/114 (19%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Query: 89 TRSKDNVEEVGLKTRSGRVVLTAIGINGCNFLFKLCAWFYTGSHSLFSECIHSLADTVNQ 148
TR + V E + S R + + I + ++ F S ++ ++ H L+D
Sbjct: 39 TRQEHCVSETKEREESTRRLSSLIFLYLIVMSVQIVGGFKANSLAVMTDAAHLLSDVAGL 98
Query: 149 LILAYGIHKSVQMADPDHPYGYTNMRYVSSLISGVGIFCVGSGLSFYHGVTGIL 202
+ I S A+P + +G+ + +++ +S V + + SG+ + + +L
Sbjct: 99 CVSLLAIKVSSWEANPRNSFGFKRLEVLAAFLS-VQLIWLVSGVIIHEAIQRLL 151
>At5g24360.1 68418.m02872 protein kinase family protein / Ire1
homolog-1 (IRE1-1) identical to Ire1 homolog-1
[Arabidopsis thaliana] GI:15277137; cDNA Ire1 homolog-1
GI:15277136;
Length = 881
Score = 29.1 bits (62), Expect = 6.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 161 MADPDHPYGYTNMRYVSSLISGVGIFCVGSGLSFYHGVTGILDPQP 206
M HPYG R V+ L +F + S H +TG+L+P P
Sbjct: 684 MTGGKHPYGDNYERDVNVLNDQKDLFLIESLPEAVHLLTGLLNPDP 729
>At3g23840.1 68416.m02997 transferase family protein low similarity
to hypersensitivity-related gene [Nicotiana tabacum]
GI:1171577, acetyl-CoA:benzylalcohol acetyltranferase
[Clarkia concinna] GI:6166330; contains Pfam profile
PF02458: Transferase family
Length = 420
Score = 29.1 bits (62), Expect = 6.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 390 DTIDDVETFLLKHGENIVDMLGGEIDRIELKLRKKFPQIRHCDLE 434
+ +DDV F++ +G N+ + E+D E K+ K P+ +C+++
Sbjct: 330 EIVDDVSDFIV-YGANLTFVDMSEVDFYEAKVMGKSPESVYCNVQ 373
>At5g39210.1 68418.m04749 expressed protein
Length = 156
Score = 28.7 bits (61), Expect = 8.0
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 367 RALTRSYLEKHDLNALLEDMKKIDTIDDVETFLLK 401
+A R +LE +N+L D+ + D +D+ FL+K
Sbjct: 100 KAKLRGWLENWPVNSLPPDLARFDDLDEAVDFLVK 134
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.322 0.139 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,607,522
Number of Sequences: 28952
Number of extensions: 391580
Number of successful extensions: 896
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 886
Number of HSP's gapped (non-prelim): 22
length of query: 436
length of database: 12,070,560
effective HSP length: 83
effective length of query: 353
effective length of database: 9,667,544
effective search space: 3412643032
effective search space used: 3412643032
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
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