Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000955-TA|BGIBMGA000955-PA|undefined
(90 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g28440.1 68415.m03455 proline-rich family protein contains pr... 31 0.098
At4g31570.1 68417.m04483 expressed protein 31 0.13
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 29 0.30
At1g54290.1 68414.m06189 eukaryotic translation initiation facto... 29 0.40
At2g38410.1 68415.m04718 VHS domain-containing protein / GAT dom... 29 0.52
At3g08970.1 68416.m01048 DNAJ heat shock N-terminal domain-conta... 28 0.69
At1g63205.1 68414.m07143 hypothetical protein 28 0.91
At4g25940.1 68417.m03731 epsin N-terminal homology (ENTH) domain... 27 1.2
At1g63240.1 68414.m07148 expressed protein 27 1.2
At1g22970.1 68414.m02870 expressed protein 27 1.6
At5g22290.1 68418.m02599 no apical meristem (NAM) family protein... 27 2.1
At5g09820.1 68418.m01136 plastid-lipid associated protein PAP / ... 26 2.8
At4g40010.1 68417.m05665 serine/threonine protein kinase, putati... 26 2.8
At3g20520.1 68416.m02598 glycerophosphoryl diester phosphodieste... 26 2.8
At2g28940.2 68415.m03518 protein kinase family protein contains ... 26 2.8
At2g28940.1 68415.m03517 protein kinase family protein contains ... 26 2.8
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 26 2.8
At1g58070.1 68414.m06581 expressed protein 26 2.8
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 26 2.8
At5g56950.1 68418.m07109 nucleosome assembly protein (NAP), puta... 26 3.7
At3g15115.1 68416.m01912 expressed protein 26 3.7
At2g27070.1 68415.m03252 two-component responsive regulator fami... 26 3.7
At1g35110.1 68414.m04352 Ulp1 protease family protein similar to... 26 3.7
At1g30460.1 68414.m03723 zinc finger (CCCH-type) family protein ... 26 3.7
At1g09720.1 68414.m01091 kinase interacting family protein simil... 26 3.7
At1g08520.1 68414.m00943 magnesium-chelatase subunit chlD, chlor... 26 3.7
At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin... 25 4.9
At5g22240.1 68418.m02589 ovate family protein 60% similar to ova... 25 4.9
At5g62810.1 68418.m07884 peroxisomal protein (PEX14) identical t... 25 6.4
At5g11390.1 68418.m01329 expressed protein 25 6.4
At4g08180.3 68417.m01353 oxysterol-binding family protein simila... 25 6.4
At4g08180.2 68417.m01352 oxysterol-binding family protein simila... 25 6.4
At4g08180.1 68417.m01351 oxysterol-binding family protein simila... 25 6.4
At3g01810.1 68416.m00123 expressed protein 25 6.4
At2g36490.1 68415.m04479 HhH-GPD base excision DNA repair family... 25 6.4
At2g22610.1 68415.m02680 kinesin motor protein-related 25 6.4
At1g76820.1 68414.m08939 expressed protein 25 6.4
At1g54200.1 68414.m06178 expressed protein 25 6.4
At1g03830.1 68414.m00364 guanylate-binding family protein contai... 25 6.4
At5g21050.1 68418.m02505 expressed protein 25 8.5
At5g20540.1 68418.m02439 expressed protein 25 8.5
At4g27070.1 68417.m03892 tryptophan synthase, beta subunit 2 (TS... 25 8.5
At3g57910.1 68416.m06455 D111/G-patch domain-containing protein ... 25 8.5
At3g52380.1 68416.m05757 33 kDa ribonucleoprotein, chloroplast, ... 25 8.5
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 25 8.5
At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar ... 25 8.5
At3g06035.1 68416.m00689 expressed protein 25 8.5
At2g44510.1 68415.m05534 p21Cip1-binding protein-related similar... 25 8.5
At2g34150.1 68415.m04180 expressed protein 25 8.5
At2g25090.1 68415.m03002 CBL-interacting protein kinase 16 (CIPK... 25 8.5
At2g21450.1 68415.m02552 SNF2 domain-containing protein / helica... 25 8.5
At2g17830.1 68415.m02065 F-box family protein contains Pfam doma... 25 8.5
At1g52060.1 68414.m05873 jacalin lectin family protein similar t... 25 8.5
At1g50840.1 68414.m05717 polI-like DNA polymerase, putative simi... 25 8.5
At1g43700.1 68414.m05020 VirE2-interacting protein (VIP1) identi... 25 8.5
>At2g28440.1 68415.m03455 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420; +
Length = 268
Score = 31.1 bits (67), Expect = 0.098
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 12 PAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEY 48
P PE P SS + P+P P+D+D DD E E EY
Sbjct: 151 PQPESP-SSPSYPEPAPVPAPSDDDSDDD-PEPETEY 185
>At4g31570.1 68417.m04483 expressed protein
Length = 2712
Score = 30.7 bits (66), Expect = 0.13
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 2 SEIIKS--EGACPAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFAVESLR 59
S + KS +GA PA K + E+ + P PE + DDL+E + +++ + +LR
Sbjct: 866 SSVSKSSDKGATPAVSKLIQAFESKRKPEEPESENAQLTDDLSEAD-QFVSVNVQIRNLR 924
Query: 60 KVMMDL 65
++ L
Sbjct: 925 GLLDQL 930
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.5 bits (63), Expect = 0.30
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 1 MSEIIKSEGACPAPEKPASSD---ENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFAVES 57
+ +++ G PA E+PASS E VQ P P E+ + E EKE ++T A +
Sbjct: 254 LDKLLAELGETPAAERPASSTPEVEKVQAQPGPVAPVENAGE--KEGEKETVETAAAKKK 311
Query: 58 LRKVMMD 64
+K D
Sbjct: 312 KKKKEKD 318
>At1g54290.1 68414.m06189 eukaryotic translation initiation factor
SUI1, putative similar to P|P32911 Protein translation
factor SUI1 {Saccharomyces cerevisiae}; contains Pfam
profile PF01253: Translation initiation factor SUI1
Length = 113
Score = 29.1 bits (62), Expect = 0.40
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 20 SDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFAVESLRKVMMDLNFTVDGVAKEDKYS 79
SD VQ P +P + +D KEY+ + + RK + TV G+ KE YS
Sbjct: 2 SDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLT----TVQGLKKEYSYS 57
Query: 80 VVL 82
+L
Sbjct: 58 KIL 60
>At2g38410.1 68415.m04718 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate HRS
isoform 2 [Homo sapiens] GI:9022389; contains Pfam
profiles PF00790: VHS domain, PF03127: GAT domain
Length = 671
Score = 28.7 bits (61), Expect = 0.52
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 12 PAPEKPASSDENVQFPPLPEPTDEDF 37
P+P PA SD+N P P+P + +
Sbjct: 453 PSPPPPAGSDQNTHIYPQPQPRFDSY 478
>At3g08970.1 68416.m01048 DNAJ heat shock N-terminal
domain-containing protein low similarity to
PIR|A47079|A47079 heat shock protein dnaJ - Lactococcus
lactis; contains Pfam profile PF00226 DnaJ domain
Length = 572
Score = 28.3 bits (60), Expect = 0.69
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 41 LNEEEKEYIKTKFAVESLRKVMMDLNFTVDGVAKEDK 77
L+ EK+ +KT V++L+ + +L ++G+ K++K
Sbjct: 382 LSNGEKQVLKTGITVKNLKSAVQELGKLLEGLEKKNK 418
>At1g63205.1 68414.m07143 hypothetical protein
Length = 189
Score = 27.9 bits (59), Expect = 0.91
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 29 LPEPTDEDFQDDLNEEEKEYIKTKFAVESLRK 60
L +P D DF DD +EE +F+ ESL++
Sbjct: 76 LVDPDDFDFLDDESEETNGDFMKRFSQESLKR 107
>At4g25940.1 68417.m03731 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Chain B, Crystal Structure Of N-Terminal Domain Of
Drosophila Ap180 (GP:13399617) [Drosophila
melanogaster]; supporting cDNA
gi|20465326|gb|AY096427.1|
Length = 601
Score = 27.5 bits (58), Expect = 1.2
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 14 PEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFAVES 57
PE+PA +D + +P E+ ++D + E+E K F +++
Sbjct: 348 PEEPAEADNQKENSEGDQPLIEEEEEDQEKIEEEDAKPSFLIDT 391
>At1g63240.1 68414.m07148 expressed protein
Length = 548
Score = 27.5 bits (58), Expect = 1.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 17 PASSDENVQFPPLPEPTDEDFQDDLNEE 44
P S+D N+ P PT D + LNEE
Sbjct: 483 PGSADSNLPLPDFGLPTFSDIKISLNEE 510
>At1g22970.1 68414.m02870 expressed protein
Length = 357
Score = 27.1 bits (57), Expect = 1.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 1 MSEIIKSEGACPAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEY--IKTKFAVESL 58
+ E+ + + ACP E AS D + D+D DDL+ EE E + T+ E++
Sbjct: 178 LREMKEVKPACPLSECEASGDNMSS----DDDDDDDLGDDLSPEEMEVATMVTEIVSETI 233
Query: 59 RKVMMDLNFTVDGVAK 74
V+ +L + G+ K
Sbjct: 234 -MVIKELIRVITGMIK 248
>At5g22290.1 68418.m02599 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain
Length = 340
Score = 26.6 bits (56), Expect = 2.1
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 19 SSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFAVESLRKVMMDLNFTVDGVAKEDKY 78
S+ ++ PLP D+ L E + K K A ESL + L +++ V K ++
Sbjct: 266 SASMEIRVLPLPNMIDKQMSSLLEERPSQKKKGKDATESLSSCFVGL-YSIKSVNKA-RW 323
Query: 79 SVVLTVL 85
V++ V+
Sbjct: 324 DVIIGVV 330
>At5g09820.1 68418.m01136 plastid-lipid associated protein PAP /
fibrillin family protein low similarity to plastid-lipid
associated protein PAP3 [Brassica rapa] GI:14248552;
contains Pfam profile PF04755: PAP_fibrillin
Length = 259
Score = 26.2 bits (55), Expect = 2.8
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 34 DEDFQDDLNEEEKEYIKTKFAVESLRKVMMDLNFTVDGVAKEDKYSV 80
+E QD+ E+E+E I E L + + +N + GV + K +
Sbjct: 66 NEQQQDEEQEQEQEEITVSHIKEELYEALKGINRGIFGVKSDKKTEI 112
>At4g40010.1 68417.m05665 serine/threonine protein kinase, putative
similar to serine-threonine protein kinase [Triticum
aestivum] gi|2055374|gb|AAB58348
Length = 350
Score = 26.2 bits (55), Expect = 2.8
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 28 PLPEPTDEDFQDD-LNEEEKEYIKTKFAVESLRKVMMDLNFTVDG 71
PL P +E+ D+ + EEE+E K + +VE + K++ + V+G
Sbjct: 264 PLVVPPEEEKCDNGVEEEEEEEEKCRQSVEEIVKIIEEARKGVNG 308
>At3g20520.1 68416.m02598 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam PF03009 :
Glycerophosphoryl diester phosphodiesterase family;
similar to glycerophosphodiester phosphodiesterase
(GI:1399038) [Borrelia hermsii]
Length = 729
Score = 26.2 bits (55), Expect = 2.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 17 PASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFA 54
PA D +V PPLPE + ++ E++ I+ FA
Sbjct: 678 PALLDSDVTEPPLPEARSQPPASSPSKAEEKAIEVPFA 715
>At2g28940.2 68415.m03518 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 462
Score = 26.2 bits (55), Expect = 2.8
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 22 ENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFAVESLRKVMMDL 65
ENV PP+ + T+E + +LN E + +K + + S RK ++DL
Sbjct: 396 ENVP-PPVADETEEIIKAELNGESEPELKKQGS--SYRKKVLDL 436
>At2g28940.1 68415.m03517 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 343
Score = 26.2 bits (55), Expect = 2.8
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 22 ENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFAVESLRKVMMDL 65
ENV PP+ + T+E + +LN E + +K + + S RK ++DL
Sbjct: 277 ENVP-PPVADETEEIIKAELNGESEPELKKQGS--SYRKKVLDL 317
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 26.2 bits (55), Expect = 2.8
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 1 MSEIIKSEGACPAPEKPASSDENVQFPPLPEPTD--EDFQDDLNEEEKEYIKTK 52
+ +++ + G PA E+PASS + PEP E+ + EEE K K
Sbjct: 303 LDKLLAALGETPAAERPASSTPVEEKAAQPEPVAPVENAGEKEGEEETAAAKKK 356
>At1g58070.1 68414.m06581 expressed protein
Length = 284
Score = 26.2 bits (55), Expect = 2.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 27 PPLPEPTDEDFQDDLNEEEKEYIKTKFAVESLRK 60
PP P+ E+ D L + E E +TK V+ L++
Sbjct: 119 PPSPQGPKEEIMDVLKKLEAEITETKTEVKMLKE 152
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 26.2 bits (55), Expect = 2.8
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 14 PEKPASSDENVQFPPLPEPTDEDFQDDLNEEEK 46
PE P SD V+ +PT D + L E +K
Sbjct: 176 PESPQKSDTKVESEKTIDPTKGDSEGGLKERKK 208
>At5g56950.1 68418.m07109 nucleosome assembly protein (NAP),
putative similar to nucleosome assembly protein 1
[Glycine max] GI:1161252; contains Pfam profile PF00956:
Nucleosome assembly protein (NAP)
Length = 374
Score = 25.8 bits (54), Expect = 3.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 31 EPTDEDFQDDLNEEEKEYIKTKFAVESLRK 60
E DED ++D +EE+E KTK L K
Sbjct: 323 EDEDEDEEEDDEDEEEEVSKTKKKPSVLHK 352
>At3g15115.1 68416.m01912 expressed protein
Length = 339
Score = 25.8 bits (54), Expect = 3.7
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 7 SEGACPAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKE 47
S CP PE P D + + L T DF E+KE
Sbjct: 52 SSSTCPKPELPKIGDSDSEIKLLEASTGGDFVPPPCIEKKE 92
>At2g27070.1 68415.m03252 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver domain
Length = 575
Score = 25.8 bits (54), Expect = 3.7
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 1 MSEIIKSEGACPAPEKPASSDENVQFPPLPEPTDEDFQDDL-NEEEKEYIKTKFAVESLR 59
M ++ +E A P+ PA++ LP+ + + +DL N E Y + F + +
Sbjct: 435 MQSVLNNENATYNPQPPANATTQPNLDELPQLENLNLYNDLGNTSELPYNISNFQSDDNK 494
Query: 60 K 60
K
Sbjct: 495 K 495
>At1g35110.1 68414.m04352 Ulp1 protease family protein similar to
At5g28170, At1g44880, At3g42530, At4g19320, At5g36020,
At4g03970, At3g43010, At2g10350 ; contains Pfam profile
PF02902: Ulp1 protease family, C-terminal catalytic
domain
Length = 1311
Score = 25.8 bits (54), Expect = 3.7
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 15 EKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFAVESLRKVMMDLNFTV-DGVA 73
E PASS + P + ++ +D + + T FA+ S +KV M+ + GV
Sbjct: 914 EMPASSHSVSEAQPEEKIGNDPMEDTMETPPAAHSLTGFAMFSKKKVTMETAAAIHSGVC 973
Query: 74 KED 76
K++
Sbjct: 974 KDN 976
>At1g30460.1 68414.m03723 zinc finger (CCCH-type) family protein /
YT521-B-like family protein low similarity to cleavage
and polyadenylation specificity factor 30 kDa subunit
[Bos taurus] GI:2327052; contains Pfam profiles PF00642:
Zinc finger C-x8-C-x5-C-x3-H type (and similar),
PF04146: YT521-B-like family; supporting cDNA
gi|24415581|gb|AY140901.1|
Length = 678
Score = 25.8 bits (54), Expect = 3.7
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 17 PASSDENVQFPPLPEPTDEDFQDDLNEEEKE 47
P S EN P + +E+ ++D +EEE+E
Sbjct: 448 PESRAENPDIVPFEDNEEEEEEEDESEEEEE 478
>At1g09720.1 68414.m01091 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 928
Score = 25.8 bits (54), Expect = 3.7
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 19 SSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFA--VESLRKVMMDLNFTVDG 71
SS+ + PPLP+ D + +E+++ K KFA +SLRK + + V G
Sbjct: 628 SSNSSFSMPPLPQ--RGDLKRASEQEKEDGFKVKFAGISDSLRKKIPTVEEKVRG 680
>At1g08520.1 68414.m00943 magnesium-chelatase subunit chlD,
chloroplast, putative / Mg-protoporphyrin IX chelatase,
putative (CHLD) similar to Mg-chelatase SP|O24133 from
Nicotiana tabacum, GB:AF014399 GI:2318116 from [Pisum
sativum]
Length = 760
Score = 25.8 bits (54), Expect = 3.7
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 12 PAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFAVES 57
P P+ S +E + E DE +++ NE++++ I +F ++
Sbjct: 416 PPPQNSESGEEENEEEQEEEEEDESNEENENEQQQDQIPEEFIFDA 461
Score = 24.6 bits (51), Expect = 8.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 22 ENVQFPPLPEPTDEDFQDDLNEEEKE 47
+N PP P P + + ++ NEEE+E
Sbjct: 408 QNQPPPPPPPPQNSESGEEENEEEQE 433
>At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin
homolog 1, Arabidopsis thaliana, EMBL:AT08315
[SP|P29402]
Length = 530
Score = 25.4 bits (53), Expect = 4.9
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 12 PAPEKPASSDENVQFPP----LPEPTDEDFQDDLNEEEKE 47
P +KP DE + P PE DED ++ +EE E
Sbjct: 226 PEDKKPEDWDERAKIPDPNAVKPEDWDEDAPMEIEDEEAE 265
>At5g22240.1 68418.m02589 ovate family protein 60% similar to ovate
protein (GI:23429649) [Lycopersicon esculentum];
contains TIGRFAM TIGR01568 : uncharacterized
plant-specific domain TIGR01568
Length = 196
Score = 25.4 bits (53), Expect = 4.9
Identities = 10/33 (30%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 35 EDFQDDLNEE-EKEYIKTKFAVESLRKVMMDLN 66
ED++ +N+ E+ YI+T+ ++ L + +D+N
Sbjct: 109 EDYKKSMNQMIEERYIETESELKELLRCFLDIN 141
>At5g62810.1 68418.m07884 peroxisomal protein (PEX14) identical to
PEX14 [Arabidopsis thaliana] GI:11094252; contains Pfam
profile PF04695: Peroxisomal membrane anchor protein
(Pex14p) conserved region; supporting cDNA
gi|11094253|dbj|AB037539.1|
Length = 507
Score = 25.0 bits (52), Expect = 6.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 12 PAPEKPASSDENVQFPPLPEPTDE 35
P + PA +DEN Q P +P +E
Sbjct: 9 PPSDFPALADENSQIPEATKPANE 32
>At5g11390.1 68418.m01329 expressed protein
Length = 703
Score = 25.0 bits (52), Expect = 6.4
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 15 EKPASSDENVQFPPLPEPTDEDFQDDLN-EEEKEYIKTKFAVESLRKVMMDLNF 67
++ S D+N P P T E F +DL+ + + A E L KV +D F
Sbjct: 8 DRTVSVDDNDSLVPEPSSTKESFFEDLSLTGQVMNPQLSSAGEVLTKVELDFAF 61
>At4g08180.3 68417.m01353 oxysterol-binding family protein similar
to SP|Q969R2 Oxysterol-binding protein 2 {Homo
sapiens}; contains Pfam profiles PF00169: PH domain,
PF01237: Oxysterol-binding protein
Length = 813
Score = 25.0 bits (52), Expect = 6.4
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 20 SDENVQFPPLPEPTD--EDFQDDLNEEEKEYIKTKFAVES 57
SD + PPLPEP ++ D E I T+ A +S
Sbjct: 11 SDHSPSMPPLPEPQPPLPNYAADFGSARSEPIITRSASQS 50
>At4g08180.2 68417.m01352 oxysterol-binding family protein similar
to SP|Q969R2 Oxysterol-binding protein 2 {Homo
sapiens}; contains Pfam profiles PF00169: PH domain,
PF01237: Oxysterol-binding protein
Length = 813
Score = 25.0 bits (52), Expect = 6.4
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 20 SDENVQFPPLPEPTD--EDFQDDLNEEEKEYIKTKFAVES 57
SD + PPLPEP ++ D E I T+ A +S
Sbjct: 11 SDHSPSMPPLPEPQPPLPNYAADFGSARSEPIITRSASQS 50
>At4g08180.1 68417.m01351 oxysterol-binding family protein similar
to SP|Q969R2 Oxysterol-binding protein 2 {Homo
sapiens}; contains Pfam profiles PF00169: PH domain,
PF01237: Oxysterol-binding protein
Length = 814
Score = 25.0 bits (52), Expect = 6.4
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 20 SDENVQFPPLPEPTD--EDFQDDLNEEEKEYIKTKFAVES 57
SD + PPLPEP ++ D E I T+ A +S
Sbjct: 11 SDHSPSMPPLPEPQPPLPNYAADFGSARSEPIITRSASQS 50
>At3g01810.1 68416.m00123 expressed protein
Length = 921
Score = 25.0 bits (52), Expect = 6.4
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 36 DFQDDLNEEEKEYIKTKFAVESLRKVMMDL 65
D +DD + +E Y++ F +L K + DL
Sbjct: 735 DDEDDDSSDENSYVEKSFKTFNLLKALSDL 764
>At2g36490.1 68415.m04479 HhH-GPD base excision DNA repair family
protein (ROS1) similar to DEMETER protein [Arabidopsis
thaliana] GI:21743571; contains Pfam profile PF00730:
HhH-GPD superfamily base excision DNA repair protein
Length = 1393
Score = 25.0 bits (52), Expect = 6.4
Identities = 12/59 (20%), Positives = 27/59 (45%)
Query: 20 SDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFAVESLRKVMMDLNFTVDGVAKEDKY 78
S+E + PP + ++ +EEK+Y+ + S ++ + + +VD +Y
Sbjct: 652 SEETMSSPPDHNHSSVTLKNTQPDEEKDYVPSNETSRSSSEIAISAHESVDKTTDSKEY 710
>At2g22610.1 68415.m02680 kinesin motor protein-related
Length = 1093
Score = 25.0 bits (52), Expect = 6.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 35 EDFQDDLNEEEKEYIKTKFAVESLRKVMMDLN 66
E ++ NE + ++ A E L KVMM+LN
Sbjct: 286 ERYEHKTNECHEAWMSLTSANEQLEKVMMELN 317
>At1g76820.1 68414.m08939 expressed protein
Length = 266
Score = 25.0 bits (52), Expect = 6.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 1 MSEIIKSEGACPAPEKPASSDENVQFPPLP 30
+ +++ G PA KPAS +E Q P P
Sbjct: 192 LDKLLAELGETPAAGKPASEEEKDQAQPEP 221
>At1g54200.1 68414.m06178 expressed protein
Length = 366
Score = 25.0 bits (52), Expect = 6.4
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Query: 14 PEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFAVESLRKVM----MDLNFTV 69
P S +V+F P+ DED N+ K Y + ES+R + M+ N V
Sbjct: 231 PSSSEKSKRSVRFCPVNVIFDEDSSKYNNKNNKVYGNNEREYESIRHTLENRVMEENRRV 290
Query: 70 DGVAKE 75
AKE
Sbjct: 291 IEAAKE 296
>At1g03830.1 68414.m00364 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding
protein, C-terminal domain
Length = 991
Score = 25.0 bits (52), Expect = 6.4
Identities = 13/47 (27%), Positives = 27/47 (57%)
Query: 34 DEDFQDDLNEEEKEYIKTKFAVESLRKVMMDLNFTVDGVAKEDKYSV 80
++ Q L E+ E + K +E+L + M+L+ T++ AK+++ V
Sbjct: 808 EKKLQLSLQEKTIEIDRAKGQIEALERQKMELSETLETRAKQNEEEV 854
>At5g21050.1 68418.m02505 expressed protein
Length = 355
Score = 24.6 bits (51), Expect = 8.5
Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 18 ASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFAVESLRKVMMDLNF--TVDGVAKE 75
+ S + PP P T + N E + K + A++SL ++ + N T+ + +
Sbjct: 2 SDSSSSHDSPPSPAITGDSETTVTNNESESNTKCQTAIQSLSTIVTNTNIPSTITILLDD 61
Query: 76 DKYSVVLTVLM 86
+ S ++ L+
Sbjct: 62 EAVSTAISSLL 72
>At5g20540.1 68418.m02439 expressed protein
Length = 384
Score = 24.6 bits (51), Expect = 8.5
Identities = 12/27 (44%), Positives = 13/27 (48%)
Query: 7 SEGACPAPEKPASSDENVQFPPLPEPT 33
S A P P P S DEN + PE T
Sbjct: 210 SRQAFPLPTPPRSEDENAKVEYHPEDT 236
>At4g27070.1 68417.m03892 tryptophan synthase, beta subunit 2 (TSB2)
identical to SP|25269
Length = 475
Score = 24.6 bits (51), Expect = 8.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 33 TDEDFQDDLNEEEKEYI 49
TDEDFQ +L E K+Y+
Sbjct: 114 TDEDFQRELAEILKDYV 130
>At3g57910.1 68416.m06455 D111/G-patch domain-containing protein
contains Pfam profile PF01585: G-patch domain
Length = 265
Score = 24.6 bits (51), Expect = 8.5
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 22 ENVQF-PPLPEPTDEDFQDDLNEEEKEYIKTKFAVESLRKV 61
ENV+ P DED + D EEE+E I + E L K+
Sbjct: 193 ENVEVVPEKKNEEDEDGKPDEEEEEEEEITEEDLQEILMKL 233
>At3g52380.1 68416.m05757 33 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp33, putative similar to
chloroplast RNA-binding protein (cp33) GB:BAA06523
(Arabidopsis thaliana) (Plant Mol. Biol. 27 (3), 529-539
(1995)); contains InterPro entry IPR000504: RNA-binding
region RNP-1 (RNA recognition motif) (RRM)
Length = 329
Score = 24.6 bits (51), Expect = 8.5
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 2 SEIIKSEGACPAPEKPASSDENVQFPPLPEPTDEDFQDDLNEE-EKEYIKTKFAVESLRK 60
S I + C A + +S+D+ +Q E E+ D+ EE E+E T+ + E R
Sbjct: 59 SNIRRHRFFCAAETEASSADDEIQASVEEEEEVEEEGDEGEEEVEEEKQTTQASGEEGRL 118
Query: 61 VMMDLNFTV 69
+ +L +T+
Sbjct: 119 YVGNLPYTI 127
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding
domain-containing protein contains Pfam profile
PF01388: ARID/BRIGHT DNA binding domain
Length = 747
Score = 24.6 bits (51), Expect = 8.5
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 14 PEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYI 49
P SS ++F L PT E+FQ +N +++
Sbjct: 40 PFPDLSSSGRLKFQVLNNPTPEEFQVAVNSSATDFV 75
>At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar
to DNA-dependent ATPase SNF2H [Mus musculus]
GI:14028669; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00249: Myb-like DNA-binding domain
Length = 1055
Score = 24.6 bits (51), Expect = 8.5
Identities = 11/40 (27%), Positives = 24/40 (60%)
Query: 15 EKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFA 54
++ A++DE+ P ++D++D+ +EE+ E K + A
Sbjct: 43 DEVAAADESPVSDGEAAPVEDDYEDEEDEEKAEISKREKA 82
>At3g06035.1 68416.m00689 expressed protein
Length = 200
Score = 24.6 bits (51), Expect = 8.5
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 45 EKEYIKTKFAVESLRKVMMDLNFTVDGVAKEDKYSVVL 82
E + T F + D FT G+ KED + VV+
Sbjct: 117 ESNLVLTNFTKSQYSMSLNDSKFTGIGIGKEDDWIVVV 154
>At2g44510.1 68415.m05534 p21Cip1-binding protein-related similar
to p21Cip1-binding protein TOK-1beta (GI:7339688) [Homo
sapiens]; similar to BRCA2 and Cip1/p21 interacting
protein (GI:25989375) [Homo sapiens]
Length = 326
Score = 24.6 bits (51), Expect = 8.5
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 11 CPAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEE 45
C ++ S DE + P LP E+ D ++EE
Sbjct: 42 CQCSDEDISFDEKQKIPNLPRKGKEEQVSDSSDEE 76
>At2g34150.1 68415.m04180 expressed protein
Length = 700
Score = 24.6 bits (51), Expect = 8.5
Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 19 SSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFAVESLR-KVMMDLNFTVDGVAKEDK 77
S EN + + ++ +D+ E+E E I F+V+ + +L+ + V K D+
Sbjct: 250 SESENDEAFQATKEVQKNLYNDITEQETEKISNNFSVDETKCAATSELHLSSSPVYKSDE 309
>At2g25090.1 68415.m03002 CBL-interacting protein kinase 16 (CIPK16)
identical to CBL-interacting protein kinase 16
[Arabidopsis thaliana] gi|14009298|gb|AAK50348
Length = 469
Score = 24.6 bits (51), Expect = 8.5
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 14 PEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKE 47
P S DE + PP EP + + DLNE+E +
Sbjct: 284 PSVAFSIDETIPSPP--EPPTKKKKKDLNEKEDD 315
>At2g21450.1 68415.m02552 SNF2 domain-containing protein / helicase
domain-containing protein low similarity to SP|Q61687
Transcriptional regulator ATRX {Mus musculus}; contains
PFam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain
Length = 816
Score = 24.6 bits (51), Expect = 8.5
Identities = 14/61 (22%), Positives = 27/61 (44%)
Query: 4 IIKSEGACPAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFAVESLRKVMM 63
++K+ + + P DE + ++ D EEE+ + K FA ES++ +
Sbjct: 113 VVKNGDSSGSDSSPQGYDEEDSSRNSTDIDNQSLYVDAEEEEELWRKMAFAQESIKVTVE 172
Query: 64 D 64
D
Sbjct: 173 D 173
>At2g17830.1 68415.m02065 F-box family protein contains Pfam domain,
PF00646: F-box domain
Length = 394
Score = 24.6 bits (51), Expect = 8.5
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 20 SDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFAVESLRK-VMMDLNF 67
+D N F P + T F DD N+ + + + + F + L + DLNF
Sbjct: 80 NDVNPSFTP--KGTLTSFSDDANQHQVDNVSSVFHCDGLLLCITKDLNF 126
>At1g52060.1 68414.m05873 jacalin lectin family protein similar to
myrosinase-binding protein homolog [Arabidopsis
thaliana] GI:2997767; contains Pfam profile PF01419
jacalin-like lectin domain
Length = 293
Score = 24.6 bits (51), Expect = 8.5
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 46 KEYIKTKFAVESLRKVMMDLNFTVDGVAKEDKYSVVLTVLMF 87
KE +FA++ + ++ + T D + D Y +V+T L F
Sbjct: 203 KEGETEEFAIDYPNEFLISVEGTYDSILFPDHYVLVITSLSF 244
>At1g50840.1 68414.m05717 polI-like DNA polymerase, putative similar
to PolI-like DNA polymerase [Oryza sativa] GI:19912795
contains Pfam profiles PF01612: 3'-5' exonuclease,
PF00476: DNA polymerase I family A
Length = 1050
Score = 24.6 bits (51), Expect = 8.5
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 15 EKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFAVESLRKVMMDLNFTVDG 71
+K S + V PP+ E ED + ++ + I T ES+ K + +++ +DG
Sbjct: 442 KKDGSEGKIVVIPPVEELQREDREAWISYSALDAISTLKLYESMTKKLQLMDWHLDG 498
>At1g43700.1 68414.m05020 VirE2-interacting protein (VIP1) identical
to VirE2-interacting protein VIP1 GB:AAF37279 GI:7258340
from [Arabidopsis thaliana]
Length = 341
Score = 24.6 bits (51), Expect = 8.5
Identities = 15/50 (30%), Positives = 19/50 (38%)
Query: 2 SEIIKSEGACPAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKT 51
SE S G P P + D DF DDL E+++I T
Sbjct: 85 SEETSSNGVVPPNSLPPKPEARFGRHVRSFSVDSDFFDDLGVTEEKFIAT 134
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.132 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,308,218
Number of Sequences: 28952
Number of extensions: 100064
Number of successful extensions: 495
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 454
Number of HSP's gapped (non-prelim): 62
length of query: 90
length of database: 12,070,560
effective HSP length: 68
effective length of query: 22
effective length of database: 10,101,824
effective search space: 222240128
effective search space used: 222240128
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 51 (24.6 bits)
- SilkBase 1999-2023 -