Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000955-TA|BGIBMGA000955-PA|undefined
(90 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16E9.01c |php4|SPBP16F5.09c|CCAAT-binding factor complex sub... 29 0.14
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 0.19
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy... 28 0.25
SPBC1347.10 |cdc23|mcm10|MCM-associated protein Mcm10|Schizosacc... 27 0.43
SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog, Rhp... 26 0.75
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 0.99
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 25 2.3
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 25 2.3
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 25 2.3
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 24 3.0
SPBC19C7.01 ||SPBC32F12.13c|Mago binding protein homolog|Schizos... 24 3.0
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 24 3.0
SPAC22H10.03c |kap114||karyopherin Kap14|Schizosaccharomyces pom... 24 3.0
SPBC119.11c |pac1|hcs|double-strand-specific ribonuclease Pac1|S... 24 3.0
SPCC191.01 ||SPCC417.13|sequence orphan|Schizosaccharomyces pomb... 24 3.0
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 24 3.0
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 24 4.0
SPBC28F2.09 |||transcription factor TFIIA complex large subunit ... 24 4.0
SPBC30D10.11 |gpi1||pig-Q|Schizosaccharomyces pombe|chr 2|||Manual 24 4.0
SPAC17A2.14 ||SPAC17G6.01|CorA family magnesium ion transporter|... 24 4.0
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 24 4.0
SPAC5H10.04 |||NADPH dehydrogenase |Schizosaccharomyces pombe|ch... 23 5.3
SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase Gut2|Schi... 23 5.3
SPBC3B9.09 |vps36||RBZ zinc finger protein Vps36|Schizosaccharom... 23 5.3
SPCC1393.09c |||RWD domain|Schizosaccharomyces pombe|chr 3|||Manual 23 5.3
SPCC364.06 |nap1||nucleosome assembly protein Nap1 |Schizosaccha... 23 5.3
SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr ... 23 5.3
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 23 7.0
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce... 23 7.0
SPAC25B8.02 |||histone deacetylase complex subunit Sds3 |Schizos... 23 7.0
SPCC825.03c |psy1|sso1|SNARE Psy1|Schizosaccharomyces pombe|chr ... 23 7.0
SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces pomb... 23 9.2
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 23 9.2
SPAC17G8.01c |trl1|SPAC6C3.10c|tRNA ligase Trl1 |Schizosaccharom... 23 9.2
SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1 |Sc... 23 9.2
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 23 9.2
SPBC19F8.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 23 9.2
>SPBC16E9.01c |php4|SPBP16F5.09c|CCAAT-binding factor complex
subunit Php4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 28.7 bits (61), Expect = 0.14
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 2 SEIIKSEGACPAPEKP-ASSDENVQFPPLPEPTDEDFQDDLNEEE 45
SE+ KS A PAP+KP + PP P+P + D L +
Sbjct: 8 SEVEKSSSASPAPQKPMIRVSKQWVVPPRPKPGRKPALDALGRRK 52
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 0.19
Identities = 15/36 (41%), Positives = 16/36 (44%)
Query: 13 APEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEY 48
AP SD N PP P P ED D NE + Y
Sbjct: 178 APATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYY 213
>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2052
Score = 27.9 bits (59), Expect = 0.25
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 3 EIIKSEGACPAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEK 46
EI+K+ P EKPA + N PL D+D +DD+ E+
Sbjct: 356 EILKNWS--PGLEKPAKPEVNFNNLPLEIVNDDDSEDDIYAAEE 397
>SPBC1347.10 |cdc23|mcm10|MCM-associated protein
Mcm10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 593
Score = 27.1 bits (57), Expect = 0.43
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 28 PLPEPTDEDFQDDLNEEEKEYIKTKFAVESLRK-VMMDLNFTVDGVAKEDKY 78
PLP+P E + N+E K K K ++ ++ N DG ++E+K+
Sbjct: 96 PLPKPFHERLAEARNQERKRSDKLKTMKKNRKQSFQRKRNILEDGKSEEEKF 147
>SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog,
Rhp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 26.2 bits (55), Expect = 0.75
Identities = 13/50 (26%), Positives = 20/50 (40%)
Query: 29 LPEPTDEDFQDDLNEEEKEYIKTKFAVESLRKVMMDLNFTVDGVAKEDKY 78
LP + + L E + ++K ES + + D F G ED Y
Sbjct: 507 LPSHDSQRNRSSLKERDSSFVKKNLDSESNQLIFDDCVFAFSGPVHEDAY 556
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 25.8 bits (54), Expect = 0.99
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 13 APEKPASSDENVQFPPLPEPTDEDFQDDLNE 43
AP S++ + PP P P DF D NE
Sbjct: 294 APSSGDSANGGLPPPPPPPPPSNDFWKDSNE 324
>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 568
Score = 24.6 bits (51), Expect = 2.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 12 PAPEKPASSDENVQFPPLPEPTDEDFQD 39
P+ E S +E+ Q P P +ED+ D
Sbjct: 224 PSSESEVSEEESDQEMSEPSPIEEDYND 251
Score = 24.6 bits (51), Expect = 2.3
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 18 ASSDENVQFPPLPEPTDEDFQDDLNEEEKE 47
AS DE + P P P E D E+ E
Sbjct: 466 ASLDEGSESKPTPSPPAEQLTDQKQNEDNE 495
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 24.6 bits (51), Expect = 2.3
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 34 DEDFQDDLNEEEKEYIKTKFAV 55
D D QD + EE+K++++ FA+
Sbjct: 1158 DPDPQDTVIEEDKDFVEAFFAI 1179
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 24.6 bits (51), Expect = 2.3
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 23 NVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFA-----VESLRKVMMDLNFTVDGVAKEDK 77
N+Q L + ++ +E+ K ++++ + + SLR ++DLN V+ V KE+K
Sbjct: 968 NIQQKYLASEKTLEMMNETHEQFKHLVESEISTREEKITSLRSELLDLNKRVE-VLKEEK 1026
Query: 78 YS 79
S
Sbjct: 1027 ES 1028
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 24.2 bits (50), Expect = 3.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 31 EPTDEDFQDDLNEEEKEYIKT 51
EP ++F D NEE K++ KT
Sbjct: 464 EPVVQEFCDHENEEVKDHAKT 484
>SPBC19C7.01 ||SPBC32F12.13c|Mago binding protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 196
Score = 24.2 bits (50), Expect = 3.0
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 18 ASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFAVESLR 59
AS+ +++ PP+ E E + L+ ++KE K ESL+
Sbjct: 71 ASTSKSIDRPPISELEKEKLERPLSNKKKE--KNDHKAESLK 110
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 24.2 bits (50), Expect = 3.0
Identities = 15/65 (23%), Positives = 26/65 (40%)
Query: 1 MSEIIKSEGACPAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFAVESLRK 60
MSE + S+ P + S D + D+DFQD++ ++ + K
Sbjct: 545 MSENLSSKEKTAVPPRQKSRDIIASVTDVISSLDKDFQDEMAAKQSMIDSAYTQLRESTK 604
Query: 61 VMMDL 65
+ DL
Sbjct: 605 KLSDL 609
>SPAC22H10.03c |kap114||karyopherin Kap14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 986
Score = 24.2 bits (50), Expect = 3.0
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 12 PAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFAVESLR 59
P P P VQ+ LP+ E ++ D++E FA +++R
Sbjct: 349 PVPPLPPCIPLLVQYTQLPKHQIEVYESDVSEYIANEFSMDFASDTVR 396
>SPBC119.11c |pac1|hcs|double-strand-specific ribonuclease
Pac1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 24.2 bits (50), Expect = 3.0
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 12 PAPEKPASSDENVQFPPLPEPTDEDFQD 39
P E+P+S +N + EPT E+F++
Sbjct: 100 PVIEEPSSHPKNQKNQENNEPTSEEFEE 127
>SPCC191.01 ||SPCC417.13|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 178
Score = 24.2 bits (50), Expect = 3.0
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 12 PAPEKPASSDENVQFPPLPE-PTDEDFQDDLNEEEKEYIK 50
P P + + + +PE P +E D +EEE+E IK
Sbjct: 138 PTPGEQKEAPPSPAQEAIPESPVEEAIASDSDEEEEEEIK 177
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 24.2 bits (50), Expect = 3.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 30 PEPTDEDFQDDLNEEEKEYIKTKFAVES 57
PE + +DF+D +EEE E I ++ +S
Sbjct: 79 PELSPDDFEDADDEEEFEEIDAGYSSDS 106
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 23.8 bits (49), Expect = 4.0
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 31 EPTDEDFQDDLNEEEKEYIKTKFAVESLRKVMMDLNFTVD 70
E + FQ +L+ EY T ++ +L+ + LN VD
Sbjct: 966 EQRSQSFQVELSNLTSEYDTTTESIATLKTELQSLNKYVD 1005
>SPBC28F2.09 |||transcription factor TFIIA complex large subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 369
Score = 23.8 bits (49), Expect = 4.0
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 21 DENVQFPPLPEPTDEDFQDDLNEEEKE 47
+E+ + PP+ P+DE DL++ + +
Sbjct: 285 NEDEKKPPVDTPSDEAINSDLDDPDSD 311
>SPBC30D10.11 |gpi1||pig-Q|Schizosaccharomyces pombe|chr 2|||Manual
Length = 653
Score = 23.8 bits (49), Expect = 4.0
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 11 CPAPEKPASSDENVQFPPLP 30
CP P PA N+Q+ LP
Sbjct: 612 CPVPAIPAEQLYNIQYAMLP 631
>SPAC17A2.14 ||SPAC17G6.01|CorA family magnesium ion
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 617
Score = 23.8 bits (49), Expect = 4.0
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Query: 11 CPAPEKPA---SSDENVQFPPLPEPTDEDFQ 38
C +P+ P SDE+++ LPE ED Q
Sbjct: 93 CSSPKSPHRHYESDEDIENISLPESHPEDIQ 123
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 23.8 bits (49), Expect = 4.0
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 36 DFQDDLNEEEKEYIKTKFAVESLRK 60
+ ++ L+ EEK+ + TK +ESLR+
Sbjct: 940 ELKEKLSLEEKDLLDTKGELESLRE 964
>SPAC5H10.04 |||NADPH dehydrogenase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 382
Score = 23.4 bits (48), Expect = 5.3
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 24 VQFPPLPEPTDEDFQDDLNEEEK 46
+QF PLP +++++DL + +K
Sbjct: 102 IQFWPLPGDLKDEYRNDLEKMQK 124
>SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase
Gut2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 649
Score = 23.4 bits (48), Expect = 5.3
Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 13 APEKPASSDENVQFPPLPEP-TDEDFQDDLNEEEKEYIKTKFAVESLRKVMMDLNFTVDG 71
AP ASSD++V + EP T + + + E T F R +D +
Sbjct: 543 APSSDASSDKSVSYASFDEPFTVAELKYSIKYEYTR-TPTDFLARRTRLAFLDARQALQA 601
Query: 72 VA 73
VA
Sbjct: 602 VA 603
>SPBC3B9.09 |vps36||RBZ zinc finger protein
Vps36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 467
Score = 23.4 bits (48), Expect = 5.3
Identities = 9/38 (23%), Positives = 21/38 (55%)
Query: 35 EDFQDDLNEEEKEYIKTKFAVESLRKVMMDLNFTVDGV 72
E + + +E EK+ K+ + LRK +++ + + G+
Sbjct: 185 EAIKSETDEIEKQRYSNKYDTKVLRKAILEKSLRMGGI 222
>SPCC1393.09c |||RWD domain|Schizosaccharomyces pombe|chr 3|||Manual
Length = 215
Score = 23.4 bits (48), Expect = 5.3
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 41 LNEEEKEYIKTKFAVESLRKVMMDLNFTVDGVAKEDKYSVVL 82
L EEE E +K A + + M + F++ VAKE+ ++++
Sbjct: 75 LGEEEIERLKQVVAQNAEECLGMAMIFSLCSVAKEETNAILI 116
>SPCC364.06 |nap1||nucleosome assembly protein Nap1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 393
Score = 23.4 bits (48), Expect = 5.3
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 14 PEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKE 47
P P+ DE + P L E + D+Q + E+ KE
Sbjct: 293 PTPPSEEDEESESPELDELLELDYQ--IGEDFKE 324
>SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr
2|||Manual
Length = 962
Score = 23.4 bits (48), Expect = 5.3
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 61 VMMDLNFTVDGVAKEDKYSVVLTVLMFF 88
+++ F+ DG+ K D + +L +L FF
Sbjct: 362 ILIISRFSSDGIDKIDVQNFILLILKFF 389
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 23.0 bits (47), Expect = 7.0
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 31 EPTDEDFQDDLNEEEKEYIKTKFAVESLRKVMMDLNFT 68
E DE Q+ L E ++E++ SL + ++L T
Sbjct: 63 EELDEQMQELLEESQREFVLCTLKPGSLYQQPLNLTIT 100
>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 23.0 bits (47), Expect = 7.0
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Query: 12 PAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFAV 55
PA E PASS + + P+ P D + EY K AV
Sbjct: 258 PANETPASSSSSAKARPVSVP---DMSSPVPASSVEYESLKAAV 298
>SPAC25B8.02 |||histone deacetylase complex subunit Sds3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 23.0 bits (47), Expect = 7.0
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 13 APEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTK 52
A E+ E L T+ED Q DL +KE K K
Sbjct: 228 ASERAERDREKAVEKGLSGATEEDIQSDLQLLKKELAKKK 267
>SPCC825.03c |psy1|sso1|SNARE Psy1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 284
Score = 23.0 bits (47), Expect = 7.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 30 PEPTDEDFQDDLNEE 44
P T++DFQ +NEE
Sbjct: 144 PRATEDDFQTAINEE 158
>SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 298
Score = 22.6 bits (46), Expect = 9.2
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 2 SEIIKSEGACPAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIK 50
SE+ K+E A E + + E ++D + DL+ +E E +K
Sbjct: 21 SEVPKAEEAGKVVESQKDTTSEEKKEETTEKKEDDGKKDLSFDEAEVLK 69
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 22.6 bits (46), Expect = 9.2
Identities = 8/13 (61%), Positives = 12/13 (92%)
Query: 35 EDFQDDLNEEEKE 47
ED +DD++EE+KE
Sbjct: 1712 EDEEDDVDEEDKE 1724
>SPAC17G8.01c |trl1|SPAC6C3.10c|tRNA ligase Trl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 787
Score = 22.6 bits (46), Expect = 9.2
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 31 EPTDEDFQDDLNEEEKEYIKT 51
+P+D+D+ LN EY+ T
Sbjct: 569 DPSDDDYAAALNYAVNEYVPT 589
>SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 22.6 bits (46), Expect = 9.2
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 27 PPLPEPTDEDFQDDLNEEEKEYIKTKFAVESLRKVMMD 64
P PE ED Q EEE + K K ES K +D
Sbjct: 164 PSQPEGNLEDIQTSSQEEEHDNEKDK-TKESKAKGFLD 200
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7
domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1811
Score = 22.6 bits (46), Expect = 9.2
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 2 SEIIKSEGACPAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFAVESLRKV 61
S +++ E + K SDE + +PE ++ + ++N++ E K + SLR
Sbjct: 22 SSVVEEEPDSESTIKSRVSDEIDEHDSIPEQSNTEKSIEINDKNLEAEKDIESNLSLRPP 81
Query: 62 MMDLN 66
DL+
Sbjct: 82 EDDLD 86
>SPBC19F8.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 218
Score = 22.6 bits (46), Expect = 9.2
Identities = 14/47 (29%), Positives = 19/47 (40%)
Query: 18 ASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFAVESLRKVMMD 64
A + N F PLP D D E E+E T ++ V+ D
Sbjct: 157 AFKNPNDVFQPLPSKRDGDNMRLFIETEEEADMTSIKQHAIEVVLQD 203
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.132 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 447,588
Number of Sequences: 5004
Number of extensions: 18964
Number of successful extensions: 82
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 48
Number of HSP's gapped (non-prelim): 38
length of query: 90
length of database: 2,362,478
effective HSP length: 61
effective length of query: 29
effective length of database: 2,057,234
effective search space: 59659786
effective search space used: 59659786
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 46 (22.6 bits)
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