Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000954-TA|BGIBMGA000954-PA|undefined
         (86 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   2.2  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   2.2  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   2.2  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.0 bits (42), Expect = 2.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 68  LNTDLPRPDNDRYAYVV 84
           LNT    PDNDR  + +
Sbjct: 412 LNTRCENPDNDRTPFKI 428


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.0 bits (42), Expect = 2.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 68  LNTDLPRPDNDRYAYVV 84
           LNT    PDNDR  + +
Sbjct: 412 LNTRCENPDNDRTPFKI 428


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.0 bits (42), Expect = 2.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 68  LNTDLPRPDNDRYAYVV 84
           LNT    PDNDR  + +
Sbjct: 412 LNTRCENPDNDRTPFKI 428


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.133    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,920
Number of Sequences: 429
Number of extensions: 597
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 86
length of database: 140,377
effective HSP length: 48
effective length of query: 38
effective length of database: 119,785
effective search space:  4551830
effective search space used:  4551830
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.8 bits)
S2: 37 (19.0 bits)