GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000954-TA|BGIBMGA000954-PA|undefined
         (86 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        23   1.6  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           21   4.8  
AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           21   6.3  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           21   6.3  

>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 42 WAIIKNAVRAAPVVGTVSPL 61
          W++IK  +  AP    +SPL
Sbjct: 50 WSVIKEVLHKAPGNAVISPL 69


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/19 (47%), Positives = 10/19 (52%)

Query: 2   STCTFEAKRDSHRVTGTGG 20
           +T T  A   SH  TGT G
Sbjct: 481 TTTTKSASTSSHSTTGTNG 499


>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/26 (30%), Positives = 12/26 (46%)

Query: 38 EPPSWAIIKNAVRAAPVVGTVSPLIT 63
          +PP+  +       AP   TV+P  T
Sbjct: 23 DPPTTTVAPATTTVAPTTTTVAPTTT 48


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/26 (30%), Positives = 12/26 (46%)

Query: 38 EPPSWAIIKNAVRAAPVVGTVSPLIT 63
          +PP+  +       AP   TV+P  T
Sbjct: 23 DPPTTTVAPATTTVAPTTTTVAPTTT 48


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.133    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,231
Number of Sequences: 2123
Number of extensions: 2481
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 86
length of database: 516,269
effective HSP length: 53
effective length of query: 33
effective length of database: 403,750
effective search space: 13323750
effective search space used: 13323750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 41 (20.6 bits)