Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000952-TA|BGIBMGA000952-PA|IPR003577|Ras small GTPase,
Ras type, IPR003579|Ras small GTPase, Rab type, IPR003578|Ras small
GTPase, Rho type, IPR001806|Ras GTPase, IPR013753|Ras
(268 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1213 + 27058329-27058370,27058634-27058711,27058807-270589... 47 1e-05
03_05_0601 + 26039326-26039367,26039958-26040035,26040136-260403... 47 1e-05
03_06_0475 + 34193951-34194023,34195414-34195486,34195572-341956... 47 2e-05
07_01_0926 - 7775536-7775616,7775695-7775787,7775903-7775965,777... 46 3e-05
01_06_0186 + 27294973-27295211,27295610-27296045 46 3e-05
09_02_0464 - 9591139-9591571,9592601-9592818 43 2e-04
05_07_0127 - 27872803-27873238,27873842-27874059 43 3e-04
02_05_0161 + 26384079-26384086,26386173-26386226,26386376-263864... 43 3e-04
01_01_0565 - 4159946-4160042,4160140-4160243,4160378-4160533,416... 43 3e-04
03_01_0365 - 2839190-2839251,2839637-2839694,2839946-2840032,284... 42 4e-04
02_04_0402 + 22618998-22619043,22619206-22619345,22620067-226201... 42 4e-04
01_05_0340 - 21139885-21139978,21140169-21140272,21140379-211405... 42 4e-04
01_01_0893 + 7043130-7043182,7043309-7043335,7043461-7043560,704... 42 5e-04
06_03_0414 - 20548577-20549006,20553521-20553744 42 7e-04
05_01_0036 + 253734-253904,255216-255707 42 7e-04
10_08_0165 + 15356748-15356811,15357113-15357186,15357311-153573... 41 0.001
05_06_0082 - 25425050-25425479,25426551-25426783 41 0.001
01_06_1343 - 36461476-36461961,36463355-36463519 41 0.001
01_06_0712 + 31397167-31397402,31399823-31400252 41 0.001
03_01_0647 + 4745788-4745907,4746510-4746591,4746847-4746958,474... 40 0.002
04_04_0191 + 23468410-23468455,23468560-23468699,23469119-234692... 40 0.002
07_03_1397 + 26269186-26269525,26269727-26269932,26270225-262703... 39 0.004
05_03_0590 - 15884485-15884489,15884702-15884790,15885086-158852... 38 0.006
05_01_0037 - 256891-256998,257347-257502,257753-257824,258737-25... 38 0.011
07_01_0685 - 5177340-5177363,5177770-5177865,5177991-5178053,517... 37 0.020
03_01_0326 + 2535800-2535938,2536891-2536959,2537310-2537375,253... 36 0.026
10_03_0038 - 7297210-7297248,7297361-7297429,7297524-7297731,729... 36 0.045
09_02_0222 + 5968232-5968467,5970811-5971187,5972216-5972256,597... 36 0.045
07_03_0473 - 18525712-18525858,18526049-18526162,18526442-185265... 35 0.060
05_03_0286 - 11623575-11624063,11625098-11625262 35 0.060
03_06_0501 - 34380155-34380637,34380961-34381029,34382206-343822... 35 0.079
10_08_0250 - 16179646-16179759,16180197-16180325,16180519-161806... 34 0.10
06_03_1387 - 29820358-29821035 34 0.10
03_06_0637 - 35219212-35219754,35220405-35220587 34 0.10
09_06_0029 + 20336634-20336881,20337737-20338208 32 0.42
11_02_0038 - 7631462-7634428,7635975-7636250 32 0.56
05_07_0205 - 28402436-28402505,28402604-28402681,28402789-284029... 32 0.56
02_05_1357 + 35899480-35899578,35900247-35900334,35900438-359005... 32 0.56
02_01_0155 - 1080923-1081024,1081111-1081176,1081306-1081370,108... 32 0.56
08_02_1318 - 26111031-26111276,26112139-26112427,26112936-261130... 31 0.73
08_02_0076 + 11967606-11967905,11969125-11969223,11969813-119741... 31 0.73
01_05_0673 + 24183512-24183514,24183625-24183694,24184203-241842... 31 0.73
11_06_0696 + 26358713-26359779,26359826-26360110,26360177-263603... 31 0.97
11_03_0052 + 9330778-9330816,9330963-9331174,9331498-9333634 30 1.7
10_07_0191 + 13934410-13934940 30 1.7
10_06_0181 - 11532765-11533203,11536867-11537036 30 1.7
02_05_0708 - 31103246-31103359,31104146-31104178,31104297-311043... 30 1.7
02_02_0624 - 12323702-12323777,12324219-12324304,12324360-123244... 30 1.7
01_01_0909 - 7163886-7163931,7164148-7164254,7164370-7164435,716... 30 1.7
07_03_0058 - 12891692-12891727,12891807-12892095,12892111-128921... 30 2.2
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 30 2.2
06_01_0907 + 7001946-7002050,7002389-7002476,7002606-7002679,700... 30 2.2
11_06_0707 + 26467214-26470309 29 3.0
11_06_0698 + 26385989-26389090 29 3.0
05_07_0071 - 27481876-27482737,27484328-27484950 29 3.9
05_04_0401 - 20982923-20983106,20983129-20983186,20983322-209835... 29 3.9
03_06_0408 - 33722741-33722893,33723174-33723350,33723798-337239... 29 3.9
03_02_0267 + 6990674-6990890,6991692-6991761,6991824-6991913,699... 29 5.2
11_06_0708 + 26475306-26478404 28 6.8
11_06_0699 + 26394482-26396336,26396807-26397480,26397873-26398166 28 6.8
11_06_0347 + 22555087-22555943,22556638-22558783 28 6.8
11_06_0437 - 23533218-23536382 28 9.0
08_02_0718 + 20382323-20385046 28 9.0
03_03_0015 - 13755971-13756957 28 9.0
>12_02_1213 +
27058329-27058370,27058634-27058711,27058807-27058974,
27059834-27059882,27060084-27060157,27060692-27060785,
27060924-27061003,27061311-27061322
Length = 198
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/57 (40%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
K+ +LG G GKS+LV+RF+ +F+ +S + + QT+ +++E V FEI D+AG
Sbjct: 13 KLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAG 69
>03_05_0601 +
26039326-26039367,26039958-26040035,26040136-26040303,
26040994-26041042,26041502-26041575,26041940-26041948
Length = 139
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/57 (40%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
K+ +LG G GKS+LV+RF+ +F+ +S + + QT+ +++E V FEI D+AG
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAG 69
>03_06_0475 +
34193951-34194023,34195414-34195486,34195572-34195672,
34195912-34196009,34196326-34196388,34196534-34196626,
34196697-34196774
Length = 192
Score = 46.8 bits (106), Expect = 2e-05
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 25/157 (15%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAGDSG 84
K+ ++G SGVGKS L++RF F + + + + +TV +D + + +I D+AG
Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQER 76
Query: 85 DTALETPV-----------------VLVGNKID-QLGDRMISTEEGQRRSKEIGCVCFHE 126
+ T + +LVGNK D R + T +GQ + E G + F E
Sbjct: 77 FRTITTDIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYG-IKFFE 135
Query: 127 ISVRE--SIDQV-WSVFRDARRFWRVSNKWFRPRGDT 160
S + +++QV +S+ RD ++ R+S +P T
Sbjct: 136 TSAKTNLNVEQVFFSIARDIKQ--RLSETDSKPEDRT 170
>07_01_0926 -
7775536-7775616,7775695-7775787,7775903-7775965,
7776326-7776423,7776661-7776761,7776865-7776937,
7778575-7778647
Length = 193
Score = 46.0 bits (104), Expect = 3e-05
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 23/142 (16%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAGDSG 84
K+ ++G SGVGKS L++RF F + + + + +T+ +D + + +I D+AG
Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 76
Query: 85 DTALETPV-----------------VLVGNKID-QLGDRMISTEEGQRRSKEIGCVCFHE 126
+ T + +LVGNK D R + T +GQ + E G + F E
Sbjct: 77 FRTITTDIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYG-IKFFE 135
Query: 127 ISVRE--SIDQV-WSVFRDARR 145
S + +++QV +S+ RD ++
Sbjct: 136 TSAKTNLNVEQVFFSIARDIKQ 157
>01_06_0186 + 27294973-27295211,27295610-27296045
Length = 224
Score = 46.0 bits (104), Expect = 3e-05
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAGDS 83
FK+ ++G SGVGKS L+ RF F E S + +A +TV +D+ +V +I D+AG
Sbjct: 20 FKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVKAQIWDTAGQE 79
Query: 84 GDTALETPVV--LVGNKIDQLGDRMISTEEGQRRSKEI 119
A+ + VG + R I+ E +R KE+
Sbjct: 80 RYRAITSAYYRGAVGALVVYDVTRRITFENAERWLKEL 117
>09_02_0464 - 9591139-9591571,9592601-9592818
Length = 216
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAGDS 83
FK+ ++G SGVGKS L+ RF F E S + +A +++ +D+++V +I D+AG
Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQE 72
Query: 84 GDTALETPVV--LVGNKIDQLGDRMISTEEGQRRSKEI 119
A+ + VG + R ++ E +R KE+
Sbjct: 73 RYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKEL 110
>05_07_0127 - 27872803-27873238,27873842-27874059
Length = 217
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ ++G SGVGKS L+ RF F E S + +A +++ +D+++V +I D+AG
Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAG 70
>02_05_0161 +
26384079-26384086,26386173-26386226,26386376-26386448,
26386775-26386822,26386906-26386953,26387990-26388061,
26388156-26388311,26388428-26388531,26388628-26388724
Length = 219
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ ++G SGVGKS L++RF ++ Y S + + +TV D + + +I D+AG
Sbjct: 25 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAG 82
>01_01_0565 -
4159946-4160042,4160140-4160243,4160378-4160533,
4160629-4160700,4161796-4161843,4161923-4161970,
4162295-4162367,4163188-4163201
Length = 203
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ ++G SGVGKS L++RF ++ Y S + + +TV D + + +I D+AG
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAG 66
>03_01_0365 -
2839190-2839251,2839637-2839694,2839946-2840032,
2840117-2840206,2840575-2840650,2840877-2840971,
2841090-2841173,2841270-2841343,2841803-2841827
Length = 216
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVI--DNEMVYFEILDSAGDS 83
K+ +LG SGVGKS +V+RF+ +F + + QT+ D+ +V FEI D+AG
Sbjct: 33 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKFEIWDTAGQE 92
Query: 84 GDTA 87
A
Sbjct: 93 RGAA 96
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 92 VVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVR--ESIDQVWSV 139
+VLVGNK D +R +S++E Q +++ V F E S + ++I+QV+ V
Sbjct: 130 MVLVGNKADLHENRHVSSQEAQEYAEKNNMV-FIETSAKTADNINQVFEV 178
>02_04_0402 +
22618998-22619043,22619206-22619345,22620067-22620149,
22620234-22620438,22620524-22620592,22621099-22621188
Length = 210
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK I+G +GVGKS L+++F +RF +D + + + + IDN+ + +I D+AG
Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 92 VVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVR 130
V+L+GNK D R +S EEG++ +KE G V F E S +
Sbjct: 114 VMLIGNKCDLSHRRAVSYEEGEQFAKEHGLV-FMEASAK 151
>01_05_0340 -
21139885-21139978,21140169-21140272,21140379-21140534,
21140622-21140693,21140782-21140829,21140923-21140970,
21141807-21141879,21142333-21142346
Length = 202
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ ++G SGVGKS L++RF ++ Y S + + +TV D + + +I D+AG
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAG 66
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 93 VLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVRES 132
+LVGNK D +R++S E G+ + EIG + F E S +++
Sbjct: 117 LLVGNKCDLAENRVVSYEAGKALADEIG-IPFLETSAKDA 155
>01_01_0893 +
7043130-7043182,7043309-7043335,7043461-7043560,
7045110-7045256,7045342-7045422,7045509-7045654,
7046030-7046099
Length = 207
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/57 (33%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
K+ ILG SGVGK++L+ +++ ++F +Y + + + + V ID+ + +I D+AG
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAG 66
>06_03_0414 - 20548577-20549006,20553521-20553744
Length = 217
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ ++G SGVGKS L+ RF F E S + +A +++ +D ++V +I D+AG
Sbjct: 15 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAG 72
>05_01_0036 + 253734-253904,255216-255707
Length = 220
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ ++G SGVGKS L+ RF F E S + +A +T+ ++ +++ +I D+AG
Sbjct: 15 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTAG 72
>10_08_0165 +
15356748-15356811,15357113-15357186,15357311-15357394,
15357508-15357602,15357737-15357790,15357791-15357896,
15358236-15358277,15358585-15358674,15358788-15358984,
15359355-15359413,15360166-15362252
Length = 983
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVI--DNEMVYFEILDSAG 81
K+ +LG SGVGKS +V+RF+ +F + + QT+ D+ V FEI D+AG
Sbjct: 46 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTTVKFEIWDTAG 103
>05_06_0082 - 25425050-25425479,25426551-25426783
Length = 220
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ ++G SGVGKS L+ RF F E S + +A +++ +D +++ +I D+AG
Sbjct: 18 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDTAG 75
>01_06_1343 - 36461476-36461961,36463355-36463519
Length = 216
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FKI ++G SGVGKS ++ RF F E S + +A +T+ I+ + + +I D+AG
Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTIKAQIWDTAG 70
>01_06_0712 + 31397167-31397402,31399823-31400252
Length = 221
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK ++G SGVGKS L+ RF F E S + +A +++ +D ++V +I D+AG
Sbjct: 19 FKTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVKAQIWDTAG 76
>03_01_0647 +
4745788-4745907,4746510-4746591,4746847-4746958,
4747607-4747697,4747805-4747969
Length = 189
Score = 40.3 bits (90), Expect = 0.002
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 15/120 (12%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRF------------IGEYDSNLEK-IYAFQTVIDNEM 71
+K+ LG VGK+A++ RF+ +F + E D L + + +
Sbjct: 11 YKLVFLGDQAVGKTAIITRFMYDKFDATYQGYSWAGEVPELDPKLHQGFFCGSDCLRYRQ 70
Query: 72 VYFEILDSAGD-SGDTALETPVVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVR 130
+ I + + + +VLVGNK D + R IST+EG+ +++E G + F E S +
Sbjct: 71 SFLSISKWIEEVNTQRGGDVIIVLVGNKTDLVDKRQISTDEGEAKAQEHGAM-FMETSAK 129
>04_04_0191 +
23468410-23468455,23468560-23468699,23469119-23469201,
23469346-23469550,23469632-23469735,23470290-23470449
Length = 245
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK I+G +GVGKS L+++F +RF +D + + + + +D+ V +I D+AG
Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITVDSRPVKLQIWDTAG 64
Score = 31.9 bits (69), Expect = 0.56
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 92 VVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVR 130
++LVGNK D R +S EEG++ +KE G + F E S +
Sbjct: 114 IMLVGNKSDLSHRRAVSYEEGEQFAKEHGLI-FMEASAK 151
>07_03_1397 +
26269186-26269525,26269727-26269932,26270225-26270327,
26270570-26270577
Length = 218
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQ-TVIDNEMVYFEILDSAG 81
FKI +LG S VGKS L+ RF F S + + Q VID + + +I D+AG
Sbjct: 15 FKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTAG 72
>05_03_0590 -
15884485-15884489,15884702-15884790,15885086-15885251,
15885333-15885393,15886256-15886392,15887936-15888002
Length = 174
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 20 PKPK-AFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIY-AFQTVIDNEMVYFEIL 77
P+P +FK+ +LG VGK++LV+R++ F + ++ ++ Y + V++ + I
Sbjct: 9 PQPSVSFKLVLLGDGRVGKTSLVLRYVNDVFSDKQEATVQASYLTKRLVVEGVPITLSIW 68
Query: 78 DSAGDSGDTAL 88
D+AG AL
Sbjct: 69 DTAGQEKFHAL 79
>05_01_0037 -
256891-256998,257347-257502,257753-257824,258737-258784,
259071-259143,259237-259250
Length = 156
Score = 37.5 bits (83), Expect = 0.011
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 27/135 (20%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYA--------FQTVIDNE------ 70
FK+ ++G S VGKS L++RF R I E D K+ F+T+ +
Sbjct: 9 FKLLLIGDSSVGKSCLLLRFAKIRTI-ELDGKTVKLQIWDTAGQERFRTITSSYYRGAHG 67
Query: 71 -MVYFEILDSAGDSG--------DTALETPV--VLVGNKIDQLGDRMISTEEGQRRSKEI 119
++ +++ D + D V +LVGNK D + +++ TEE + ++ +
Sbjct: 68 IIIVYDVTDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESL 127
Query: 120 GCVCFHEISVRESID 134
G + F E S +ESI+
Sbjct: 128 G-ISFLETSAKESIN 141
>07_01_0685 -
5177340-5177363,5177770-5177865,5177991-5178053,
5178138-5178232,5178941-5179028,5179372-5179444,
5179866-5179920,5180355-5180463
Length = 200
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 93 VLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFH-EISVRESIDQV-WSVFRDARR 145
+LVGNK+D R++ST +GQ+ + E G F ++++QV +++ RD ++
Sbjct: 128 ILVGNKVDMDTKRVVSTAQGQKLADEYGMKFFETSAKTNQNVEQVFFTIARDIKQ 182
>03_01_0326 +
2535800-2535938,2536891-2536959,2537310-2537375,
2537979-2538100,2538501-2538629,2540462-2540569
Length = 210
Score = 36.3 bits (80), Expect = 0.026
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 93 VLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFH-EISVRESIDQ 135
+LVGNK+D+ +RM++ EEG ++E GC+ RE++++
Sbjct: 124 MLVGNKVDKNEERMVTREEGLAFAQESGCLFLESSAKTRENVEK 167
Score = 31.9 bits (69), Expect = 0.56
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 24 AFKIAILGQSGVGKSALVVRFITRRFIGE 52
+FKI ++G S VGKS+L+V F++ I +
Sbjct: 12 SFKILLIGDSAVGKSSLLVSFVSASHIDD 40
>10_03_0038 -
7297210-7297248,7297361-7297429,7297524-7297731,
7297829-7297911,7298859-7298998,7299132-7299183
Length = 196
Score = 35.5 bits (78), Expect = 0.045
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIY-AFQTVIDNEMVYFEILDSAG 81
FK +G +GVGKS L+++F +RF D Y A +D + +I D+AG
Sbjct: 9 FKFVTIGDAGVGKSCLLLQFTDKRFREVEDLTTGVEYGACVVAVDGKNTKLQIWDTAG 66
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 92 VVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVR 130
++L+GNK D R++S +EG++ +KE G + F E S +
Sbjct: 117 IILIGNKCDLSHRRVVSYQEGEQFAKEHG-LLFMEASAK 154
>09_02_0222 +
5968232-5968467,5970811-5971187,5972216-5972256,
5972808-5972843
Length = 229
Score = 35.5 bits (78), Expect = 0.045
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ ++G S VGKS L+ RF F + + + + +T+ ID V +I D+AG
Sbjct: 19 FKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAG 76
>07_03_0473 -
18525712-18525858,18526049-18526162,18526442-18526522,
18526787-18526865,18526902-18526996,18527092-18527170,
18527339-18527450,18527682-18527770,18527868-18527938,
18528846-18528962
Length = 327
Score = 35.1 bits (77), Expect = 0.060
Identities = 15/58 (25%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
+K+ LG VGK++++ RF+ +F Y + + + +T+ +++ V ++ D+AG
Sbjct: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
>05_03_0286 - 11623575-11624063,11625098-11625262
Length = 217
Score = 35.1 bits (77), Expect = 0.060
Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ ++G SGVGKS ++ RF F + S + +A +++ ++ + + +I D+AG
Sbjct: 13 FKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAG 70
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 92 VVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVRESID 134
+++VGNK D + R +S +EG+ +++ G + F E S E+++
Sbjct: 120 IMMVGNKSDLIHLRAVSEDEGKALAEKEG-LFFLETSAMEAVN 161
>03_06_0501 -
34380155-34380637,34380961-34381029,34382206-34382229,
34382622-34382786
Length = 246
Score = 34.7 bits (76), Expect = 0.079
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV 66
FKI ++G SGVGKS ++ RF F E S + +A +T+
Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTL 54
>10_08_0250 -
16179646-16179759,16180197-16180325,16180519-16180640,
16181073-16181138,16182202-16182270,16182989-16183157
Length = 222
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 24 AFKIAILGQSGVGKSALVVRFITRRFIGEYDSNL 57
+FKI ++G SGVGKS+L+V F+ D ++
Sbjct: 19 SFKILLIGDSGVGKSSLLVSFVVAAAAAHLDDDI 52
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 93 VLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVRESIDQVWSVFRD 142
+LVGNKID+ +R ++ EEG ++E GC+ F E S + + D V F +
Sbjct: 134 MLVGNKIDKEDERTVTREEGLAFAEESGCL-FLESSAK-TRDNVEKCFEE 181
>06_03_1387 - 29820358-29821035
Length = 225
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ ++G S VGK+ L+ RF F + S + + +TV I + V +I D+AG
Sbjct: 8 FKVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRVKAQIWDTAG 65
>03_06_0637 - 35219212-35219754,35220405-35220587
Length = 241
Score = 34.3 bits (75), Expect = 0.10
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV 66
FKI ++G SGVGKS L+ RF F + S + +A +T+
Sbjct: 19 FKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTI 60
>09_06_0029 + 20336634-20336881,20337737-20338208
Length = 239
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ ++G S VGK+ L+ RF F + S + + +T+ + + V +I D+AG
Sbjct: 23 FKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWDTAG 80
>11_02_0038 - 7631462-7634428,7635975-7636250
Length = 1080
Score = 31.9 bits (69), Expect = 0.56
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 11 SSLAKLVL-YPKPKAFKIAILGQSGVGKSAL 40
S L +++L + + KAFK+AI+G GVGK+ L
Sbjct: 259 SRLVEMILTHREEKAFKVAIVGTGGVGKTTL 289
>05_07_0205 -
28402436-28402505,28402604-28402681,28402789-28402968,
28403051-28403140,28403258-28403375,28403461-28403517,
28404155-28404224,28404317-28404319
Length = 221
Score = 31.9 bits (69), Expect = 0.56
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 24 AFKIAILGQSGVGKSALVVRFITRRFIGEYDSNL-EKIYAFQTVIDNEMVYFEILDSAG 81
+FK+ I+G G GK+ V R +T F +Y+ + +++ + + F D+AG
Sbjct: 13 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRFYCWDTAG 71
>02_05_1357 +
35899480-35899578,35900247-35900334,35900438-35900592,
35900652-35900715,35902910-35902974,35903061-35903126,
35903644-35903745
Length = 212
Score = 31.9 bits (69), Expect = 0.56
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAGDSGD 85
K +G VGK+ +++ + + F +Y + ++ V+D V + D+AG
Sbjct: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDY 67
Query: 86 TALETPVVLVGNKIDQLGDRMISTEEGQRRSKE 118
L P+ G + L +IS + SK+
Sbjct: 68 NRLR-PLSYRGADVFLLAFSLISKASYENVSKK 99
>02_01_0155 -
1080923-1081024,1081111-1081176,1081306-1081370,
1081938-1082001,1082359-1082507,1082591-1082678,
1083757-1083855
Length = 210
Score = 31.9 bits (69), Expect = 0.56
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAGDSGD 85
K +G VGK+ +++ + + F +Y + ++ V+D V + D+AG
Sbjct: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDY 67
Query: 86 TALETPVVLVGNKIDQLGDRMISTEEGQRRSKE 118
L P+ G + L +IS + SK+
Sbjct: 68 NRLR-PLSYRGADVFLLAFSLISKASYENVSKK 99
>08_02_1318 -
26111031-26111276,26112139-26112427,26112936-26113036,
26113628-26113878,26114842-26114865,26115793-26116129
Length = 415
Score = 31.5 bits (68), Expect = 0.73
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ I+G S VGKS L+ R+ F + + + Q++ I+ + V +I D+AG
Sbjct: 14 FKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIWDTAG 71
>08_02_0076 +
11967606-11967905,11969125-11969223,11969813-11974124,
11974177-11974211
Length = 1581
Score = 31.5 bits (68), Expect = 0.73
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 27 IAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDS-AGDSGD 85
+AI+G G+GK+ L + ++ L +Y D + E+LDS GD D
Sbjct: 285 LAIIGDGGIGKTTLAKLVFNNSTVSKHFDVLLWVYV-SVHFDQNKIMQEMLDSFCGDEHD 343
Query: 86 TALETPVVLVGNKIDQL 102
++ + + +K+D L
Sbjct: 344 EIKKSKELQLQDKLDYL 360
>01_05_0673 +
24183512-24183514,24183625-24183694,24184203-24184259,
24184348-24184465,24185044-24185133,24185209-24185388,
24185474-24185551,24185642-24185711
Length = 221
Score = 31.5 bits (68), Expect = 0.73
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 24 AFKIAILGQSGVGKSALVVRFITRRFIGEYDSNL-EKIYAFQTVIDNEMVYFEILDSAG 81
+FK+ I+G G GK+ V R +T F +Y+ + +++ + + F D+AG
Sbjct: 13 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAG 71
>11_06_0696 +
26358713-26359779,26359826-26360110,26360177-26360356,
26360516-26360585,26361051-26361950
Length = 833
Score = 31.1 bits (67), Expect = 0.97
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 16 LVLYPKPK-AFKIAILGQSGVGKSALVVR-FITRRFIGEYDSN----LEKIYAFQT---- 65
LVL K K +K+AI+G GVGK+ L + F ++ G +D + K Y+ +
Sbjct: 185 LVLAHKAKNVYKLAIVGTGGVGKTTLAQKIFNDKKLEGRFDHRAWVCVSKEYSMVSLLAQ 244
Query: 66 VIDNEMVYFEILDSAGD 82
V+ N +++E +S G+
Sbjct: 245 VLSNMKIHYEKNESVGN 261
>11_03_0052 + 9330778-9330816,9330963-9331174,9331498-9333634
Length = 795
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/39 (33%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 22 PKAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKI 60
P+ I+ILG++G+GKS L++ I + I +++++ +K+
Sbjct: 112 PQQRFISILGETGIGKSTLMLT-ICNKIIKDHENHFDKL 149
>10_07_0191 + 13934410-13934940
Length = 176
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 148 RVSNKWFRPRGDTDVHTTALSRPLARASSDTTPETNVNPPFYRQWTAMELDEEEEA 203
+V +W R G+ DV +S P AR D V P YR ++ + DEE+EA
Sbjct: 124 QVPEQWRRDDGEVDVVDLVVSHPAARRVEDL--RVRVVPCRYRSYS--DDDEEKEA 175
>10_06_0181 - 11532765-11533203,11536867-11537036
Length = 202
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQT 65
FK+ ++G S VGKS ++ RF F DS FQT
Sbjct: 11 FKVVLIGDSAVGKSQILARFARNEF--SIDSKATIGVEFQT 49
>02_05_0708 -
31103246-31103359,31104146-31104178,31104297-31104362,
31104532-31104596,31105456-31105519,31105629-31105738,
31105886-31105973,31106328-31106432
Length = 214
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/56 (23%), Positives = 29/56 (51%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAG 81
K +G VGK+ +++ + + +F +Y + ++ V+D+ V + D+AG
Sbjct: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVDSTTVNLGLWDTAG 65
>02_02_0624 -
12323702-12323777,12324219-12324304,12324360-12324425,
12324650-12324762,12324793-12324856,12324950-12325059,
12325473-12325560,12325651-12325749
Length = 233
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAGDSGD 85
K +G VGK+ +++ + + F +Y + ++ V+D V + D+AG
Sbjct: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDY 67
Query: 86 TALETPVVLVGNKIDQLGDRMIS 108
L P+ G + L +IS
Sbjct: 68 NRLR-PLSYRGADVFLLAFSLIS 89
>01_01_0909 -
7163886-7163931,7164148-7164254,7164370-7164435,
7164720-7164784,7164937-7165000,7165685-7165794,
7165972-7166059,7166100-7166297
Length = 247
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 10/48 (20%)
Query: 91 PVVLVGNKIDQLGDR----------MISTEEGQRRSKEIGCVCFHEIS 128
PVVLVG K+D DR +I+TE+G+ K IG V + E S
Sbjct: 145 PVVLVGTKLDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECS 192
>07_03_0058 -
12891692-12891727,12891807-12892095,12892111-12892193,
12895925-12895991,12896230-12896504
Length = 249
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 156 PRGDTDVHTTALSRPLARASSDTTPETNVNPPFYRQWTAMELDEEEEATVVRS 208
P T +H S PLA S T PPF + +D +++ +V R+
Sbjct: 172 PSHYTPLHANGSSPPLANGGSSMPLATPTPPPFTGNQDHVNVDSDDDTSVART 224
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 24 AFKIAILGQSGVGKSALVVRFITRRFIGEYDSNL 57
+FK+ ++G G GK+ V R IT F Y+ +
Sbjct: 441 SFKLILVGDGGTGKTTFVKRHITGEFEKRYEPTI 474
>06_01_0907 +
7001946-7002050,7002389-7002476,7002606-7002679,
7002829-7002892,7004355-7004419,7004557-7004622,
7004725-7004757,7004968-7005045,7005295-7005303
Length = 193
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/56 (23%), Positives = 28/56 (50%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAG 81
K +G VGK+ +++ + + +F +Y + ++ V+D V + D+AG
Sbjct: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVVVDGTTVNLGLWDTAG 65
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 10/48 (20%)
Query: 91 PVVLVGNKIDQLGDR----------MISTEEGQRRSKEIGCVCFHEIS 128
P+VLVG K+D D+ ++T +G+ K IG C+ E S
Sbjct: 102 PIVLVGTKLDLREDKHYLLDHPSLVPVTTAQGEELRKHIGATCYIECS 149
>11_06_0707 + 26467214-26470309
Length = 1031
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 16 LVLYPKPK-AFKIAILGQSGVGKSALVVR-FITRRFIGEYD 54
LVL K K +K+AI+G GVGK+ L + F ++ G +D
Sbjct: 185 LVLARKKKNVYKLAIVGTGGVGKTTLAQKIFNDKKLEGRFD 225
>11_06_0698 + 26385989-26389090
Length = 1033
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 16 LVLYPKPKAFKIAILGQSGVGKSALVVR-FITRRFIGEYD 54
++ + K +K+AI+G GVGK+ L + F ++ G +D
Sbjct: 186 VLAHKKKNVYKLAIVGTGGVGKTTLAQKIFNDKKLEGRFD 225
>05_07_0071 - 27481876-27482737,27484328-27484950
Length = 494
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 153 WFRPRGDTDV-HTTALSRPLARASSDTTPETNVNPPFYRQWTAMELDEEE-EATVVRSNS 210
W + RG H TA + P A S P P + W+ + E ++T+ S +
Sbjct: 135 WVKCRGAASPSHATATASPAAAPSPAVAPPRVFRPGDSKTWSPIPCSSETCKSTIPFSLA 194
Query: 211 TSSSGQSDCLEEFR 224
SS + C ++R
Sbjct: 195 NCSSSTAACSYDYR 208
>05_04_0401 -
20982923-20983106,20983129-20983186,20983322-20983503,
20983637-20983752,20984148-20984234,20984334-20984477,
20984556-20984672,20984790-20984936,20985717-20985938,
20986919-20987072,20987583-20987632,20987870-20987921,
20987985-20988211
Length = 579
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 22 PKAFKIAILGQSGVGKSALVVRFITRR 48
P+A + I+G VGKS+L+ R + RR
Sbjct: 398 PRAVRAGIVGYPNVGKSSLINRLLKRR 424
>03_06_0408 -
33722741-33722893,33723174-33723350,33723798-33723947,
33724085-33724145,33724338-33724558
Length = 253
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYD 54
++A++G G GKS+LV T RF + D
Sbjct: 16 RVAVIGDHGTGKSSLVATIATGRFPDQDD 44
>03_02_0267 +
6990674-6990890,6991692-6991761,6991824-6991913,
6992635-6992797,6992910-6993137
Length = 255
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 20 PKPKAFKIAILGQSGVGKSALVVRFITRR 48
PK + A+LG+S VGKS+L+ I R+
Sbjct: 35 PKDDRPEFAVLGRSNVGKSSLINALIRRK 63
>11_06_0708 + 26475306-26478404
Length = 1032
Score = 28.3 bits (60), Expect = 6.8
Identities = 9/28 (32%), Positives = 21/28 (75%)
Query: 13 LAKLVLYPKPKAFKIAILGQSGVGKSAL 40
+++++ + + K +K+AI+G G+GK+ L
Sbjct: 182 VSQVLTHKEKKTYKLAIIGTGGIGKTTL 209
>11_06_0699 + 26394482-26396336,26396807-26397480,26397873-26398166
Length = 940
Score = 28.3 bits (60), Expect = 6.8
Identities = 9/28 (32%), Positives = 21/28 (75%)
Query: 13 LAKLVLYPKPKAFKIAILGQSGVGKSAL 40
+++++ + + K +K+AI+G G+GK+ L
Sbjct: 182 VSQVLTHKEKKTYKLAIIGTGGIGKTTL 209
>11_06_0347 + 22555087-22555943,22556638-22558783
Length = 1000
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 27 IAILGQSGVGKSALVVRFITRRFIGEYDS 55
+AI+G G+GK+ L + F R+F E+DS
Sbjct: 201 LAIVGSGGLGKTTLAMSFY-RKFGDEFDS 228
>11_06_0437 - 23533218-23536382
Length = 1054
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 19 YPKPKAFKIAILGQSGVGKSALVVR-FITRRFIGEYDSNL 57
+ K + +K+AI+G G+GK+ L + + ++ G +D +
Sbjct: 209 HKKKEPYKLAIVGTGGIGKTTLAQKIYNDKKVEGNFDKRI 248
>08_02_0718 + 20382323-20385046
Length = 907
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 9 PKSSLAKLVLYPKPKAFKIAILGQSGVGKSAL 40
PK+ + +L+L + + I+I+G +GVGK+ L
Sbjct: 166 PKAKVTQLLLDEEKQLRVISIIGSAGVGKTTL 197
>03_03_0015 - 13755971-13756957
Length = 328
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 18 LYPKPKAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYA 62
L KPK I +LG + GKS L +R + RF GE N +KI A
Sbjct: 14 LSTKPKV--IFVLGATATGKSKLAIR-LAARFDGEV-INSDKIQA 54
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.129 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,765,531
Number of Sequences: 37544
Number of extensions: 260701
Number of successful extensions: 1044
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 953
Number of HSP's gapped (non-prelim): 100
length of query: 268
length of database: 14,793,348
effective HSP length: 81
effective length of query: 187
effective length of database: 11,752,284
effective search space: 2197677108
effective search space used: 2197677108
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
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