Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000952-TA|BGIBMGA000952-PA|IPR003577|Ras small GTPase,
Ras type, IPR003579|Ras small GTPase, Rab type, IPR003578|Ras small
GTPase, Rho type, IPR001806|Ras GTPase, IPR013753|Ras
(268 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein. 50 5e-08
AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small... 36 0.002
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 27 0.56
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 26 0.99
AY146744-1|AAO12104.1| 176|Anopheles gambiae odorant-binding pr... 26 1.3
AY146758-1|AAO12073.1| 289|Anopheles gambiae odorant-binding pr... 24 4.0
AJ618930-1|CAF02010.2| 273|Anopheles gambiae odorant-binding pr... 24 4.0
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh... 24 4.0
AF393485-1|AAL60410.1| 289|Anopheles gambiae odorant binding pr... 24 4.0
U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette... 24 5.3
U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette... 24 5.3
U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette... 24 5.3
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 24 5.3
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 23 9.2
>EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein.
Length = 213
Score = 50.4 bits (115), Expect = 5e-08
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ +LG+S VGKS+LV+RF+ +F +S + + QT+ ID+ V FEI D+AG
Sbjct: 25 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAG 82
>AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small
GTPase protein.
Length = 190
Score = 35.5 bits (78), Expect = 0.002
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 23 KAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAG 81
+ K ++G VGK+ +++ + T F GEY Y+ V+D V + D+AG
Sbjct: 5 RPIKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMVVDGVQVSLGLWDTAG 63
Score = 23.8 bits (49), Expect = 5.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 89 ETPVVLVGNKIDQLGDR 105
+ P++LVG KID DR
Sbjct: 110 DAPIILVGTKIDLREDR 126
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 27.1 bits (57), Expect = 0.56
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 168 SRPLARASSDTTPETNVNPPFYRQWTAMELDEEEEATVVRSNSTSSSGQSDCLEEFRARA 227
SRP++R++SD + + + ++ D +E A+V+ SN S + L++ +A
Sbjct: 1064 SRPVSRSASDEASKDGMVASKEERTDVVKDDGKEPASVI-SNDNGPSENNGTLDKHHEKA 1122
Query: 228 ST 229
+T
Sbjct: 1123 AT 1124
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein
protein.
Length = 1036
Score = 26.2 bits (55), Expect = 0.99
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 11 SSLAKLVLYPKPKAFKIAILGQSGVGKSALVVRFI 45
S+ +VLYP+ + ILG +G GKSA+V +
Sbjct: 19 STYDSVVLYPEE--YLNIILGPNGTGKSAIVAGIV 51
>AY146744-1|AAO12104.1| 176|Anopheles gambiae odorant-binding
protein AgamOBP8 protein.
Length = 176
Score = 25.8 bits (54), Expect = 1.3
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 181 ETNVNP--PFYRQWTAMELDEEEEATVVRSNSTSSSGQSDCLEEFRARAST 229
+ NV P P R T + + A VVR+ + +++ + +C++++ R S+
Sbjct: 28 DANVFPAYPVLRNSTPFSIFQTHGAYVVRTFADATAYRDECVQQYAGRGSS 78
>AY146758-1|AAO12073.1| 289|Anopheles gambiae odorant-binding
protein AgamOBP30 protein.
Length = 289
Score = 24.2 bits (50), Expect = 4.0
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 14 AKLVLYPKP-KAFKIAILGQSGV-GKSALVVRFITRR---FIGEYDSNLEKIYAFQTVID 68
A ++ YP P ++F A +G G V+R R + +Y NL++IY
Sbjct: 183 ADMLQYPMPDRSFSCAKTHVAGAEGDFDCVLRCYMLRTGLYSEQYGPNLDRIYVQCNNYA 242
Query: 69 NEMVYFEILDS 79
NE V+ E D+
Sbjct: 243 NETVFRETTDA 253
>AJ618930-1|CAF02010.2| 273|Anopheles gambiae odorant-binding
protein OBPjj83c protein.
Length = 273
Score = 24.2 bits (50), Expect = 4.0
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 14 AKLVLYPKP-KAFKIAILGQSGV-GKSALVVRFITRR---FIGEYDSNLEKIYAFQTVID 68
A ++ YP P ++F A +G G V+R R + +Y NL++IY
Sbjct: 167 ADMLQYPMPDRSFSCAKTHVAGAEGDFDCVLRCYMLRTGLYSEQYGPNLDRIYVQCNNYA 226
Query: 69 NEMVYFEILDS 79
NE V+ E D+
Sbjct: 227 NETVFRETTDA 237
>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
cell-adhesion protein protein.
Length = 1881
Score = 24.2 bits (50), Expect = 4.0
Identities = 11/17 (64%), Positives = 13/17 (76%)
Query: 70 EMVYFEILDSAGDSGDT 86
E V FE L+S+G SGDT
Sbjct: 688 EAVDFERLESSGGSGDT 704
>AF393485-1|AAL60410.1| 289|Anopheles gambiae odorant binding
protein 1 protein.
Length = 289
Score = 24.2 bits (50), Expect = 4.0
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 14 AKLVLYPKP-KAFKIAILGQSGV-GKSALVVRFITRR---FIGEYDSNLEKIYAFQTVID 68
A ++ YP P ++F A +G G V+R R + +Y NL++IY
Sbjct: 183 ADMLQYPMPDRSFSCAKTHVAGAEGDFDCVLRCYMLRTGLYSEQYGPNLDRIYVQCNNYA 242
Query: 69 NEMVYFEILDS 79
NE V+ E D+
Sbjct: 243 NETVFRETTDA 253
>U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 23.8 bits (49), Expect = 5.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 8 SPKSSLAKLVLYPKPKAFKIAILGQSGVGKSALV 41
+P+ L K V +A++G SG GK+ L+
Sbjct: 110 NPRKHLLKNVTGVAKSGELLAVMGSSGAGKTTLL 143
>U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 23.8 bits (49), Expect = 5.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 8 SPKSSLAKLVLYPKPKAFKIAILGQSGVGKSALV 41
+P+ L K V +A++G SG GK+ L+
Sbjct: 110 NPRKHLLKNVTGVAKSGELLAVMGSSGAGKTTLL 143
>U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 673
Score = 23.8 bits (49), Expect = 5.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 8 SPKSSLAKLVLYPKPKAFKIAILGQSGVGKSALV 41
+P+ L K V +A++G SG GK+ L+
Sbjct: 88 NPRKHLLKNVTGVAKSGELLAVMGSSGAGKTTLL 121
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 23.8 bits (49), Expect = 5.3
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 68 DNEMVYFEILDSAGDSGDTALETPVVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEI 127
+ + + E+ G S + E L N +QLGD I E RR K+ V ++
Sbjct: 461 EQKRIKAELSQDVGTSKERIHELQSEL-DNVREQLGDAKIDKHEDARRKKKQEVVELFKL 519
Query: 128 SVRESIDQVWSVFRDARRFWRVS 150
V D++ ++ + + + V+
Sbjct: 520 EVPGVYDRMINMCQPTHKRYNVA 542
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 23.0 bits (47), Expect = 9.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 196 ELDEEEEATVVRSNSTSSSGQS 217
E DE+E +V R+NST S S
Sbjct: 260 EDDEDENISVTRTNSTIRSRSS 281
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.316 0.129 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,531
Number of Sequences: 2123
Number of extensions: 8452
Number of successful extensions: 95
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 82
Number of HSP's gapped (non-prelim): 16
length of query: 268
length of database: 516,269
effective HSP length: 63
effective length of query: 205
effective length of database: 382,520
effective search space: 78416600
effective search space used: 78416600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 47 (23.0 bits)
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