Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000952-TA|BGIBMGA000952-PA|IPR003577|Ras small GTPase,
Ras type, IPR003579|Ras small GTPase, Rab type, IPR003578|Ras small
GTPase, Rho type, IPR001806|Ras GTPase, IPR013753|Ras
(268 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 62 5e-10
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 62 5e-10
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 61 9e-10
Z81039-11|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 60 2e-09
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 59 4e-09
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 59 4e-09
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 59 4e-09
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 59 4e-09
AF045637-2|AAN63433.1| 168|Caenorhabditis elegans R-ras related... 59 4e-09
AF045637-1|AAK72295.1| 212|Caenorhabditis elegans R-ras related... 59 4e-09
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 55 5e-08
AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical ... 55 5e-08
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 54 8e-08
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 54 8e-08
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 49 3e-06
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 43 2e-04
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 43 2e-04
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 43 3e-04
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 43 3e-04
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 41 8e-04
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 41 8e-04
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 41 0.001
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 40 0.001
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 40 0.001
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 40 0.002
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 40 0.002
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 40 0.002
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 40 0.002
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 40 0.002
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 40 0.002
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 40 0.002
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 40 0.002
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 40 0.002
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 39 0.003
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 39 0.003
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 39 0.003
Z75710-3|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 38 0.006
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 38 0.006
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 38 0.006
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 38 0.006
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 38 0.006
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 38 0.006
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 38 0.006
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 38 0.006
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 37 0.013
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 37 0.013
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 37 0.013
U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey... 37 0.017
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 37 0.017
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 36 0.023
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 36 0.030
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 36 0.030
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 36 0.030
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 36 0.030
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 36 0.030
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 36 0.040
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 36 0.040
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 36 0.040
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 35 0.053
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 35 0.053
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 35 0.070
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 34 0.092
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 34 0.092
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 34 0.12
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 34 0.12
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 34 0.12
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 34 0.12
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 32 0.37
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 32 0.37
AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical ... 31 0.86
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 30 1.5
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 30 1.5
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 30 1.5
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 30 1.5
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 30 1.5
AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical ... 30 1.5
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 30 1.5
U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein. 30 2.0
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 29 4.6
U23449-6|AAC24300.2| 937|Caenorhabditis elegans Hypothetical pr... 29 4.6
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 29 4.6
AC006673-3|AAF39929.1| 861|Caenorhabditis elegans Hypothetical ... 29 4.6
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 29 4.6
Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical pr... 28 6.1
AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein... 28 6.1
Z47075-7|CAA87384.1| 394|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z36752-8|CAA85330.1| 394|Caenorhabditis elegans Hypothetical pr... 28 8.0
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 28 8.0
U80032-3|AAM15556.1| 404|Caenorhabditis elegans Sox (mammalian ... 28 8.0
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 28 8.0
AL110478-7|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 28 8.0
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 28 8.0
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 61.7 bits (143), Expect = 5e-10
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAGDSG 84
+K+ ++G GVGKSAL ++ I F+ EYD +E Y Q VID E +ILD+AG
Sbjct: 4 YKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEE 63
Query: 85 DTALETPVVLVG 96
+A+ + G
Sbjct: 64 YSAMRDQYMRTG 75
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 61.7 bits (143), Expect = 5e-10
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAGDSG 84
+K+ ++G GVGKSAL ++ I F+ EYD +E Y Q VID E +ILD+AG
Sbjct: 7 YKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEE 66
Query: 85 DTALETPVVLVG 96
+A+ + G
Sbjct: 67 YSAMRDQYMRTG 78
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 60.9 bits (141), Expect = 9e-10
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 23 KAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAGD 82
+ +KI +LG GVGKSAL V+F+ F+ +YD +E Y Q +D + EILD+AG
Sbjct: 2 REYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGT 61
Query: 83 SGDTAL 88
TA+
Sbjct: 62 EQFTAM 67
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 89 ETPVVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVRESIDQVWSVFRDARR 145
E P++LVGNK D +R++ ++GQ +++ G F E S + I+ V VF D R
Sbjct: 108 EVPMILVGNKCDLEDERVVGKDQGQNLARQFGS-AFLETSAKAKIN-VSEVFYDLVR 162
>Z81039-11|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 23 KAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAG 81
+ FK+ +LG GVGKSAL V+F++ FI +YD +E Y + +D + EILD+AG
Sbjct: 2 REFKVVVLGSGGVGKSALTVQFVSSTFIEKYDPTIEDFYRKEIEVDGQPSVLEILDTAG 60
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 91 PVVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVRES 132
P++LVGNK D R + +EEG ++ C F E S + +
Sbjct: 110 PILLVGNKCDLSHQRQVRSEEGLALAESWSCP-FTECSAKNN 150
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAGDSGD 85
+I ++G GVGKSAL ++FI R F+ +YD +E Y Q +D ++ EILD+AG
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEEF 78
Query: 86 TALETPVVLVGN 97
+ + + G+
Sbjct: 79 STMREQYLRTGS 90
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 91 PVVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEIS--VRESIDQV-WSVFRDARRFW 147
P++LVGNK D +R ++ E + + + + + E S +R+++D+ + + R R++
Sbjct: 124 PIILVGNKADLENERHVARHEAEELAHRLS-IPYLECSAKIRKNVDEAFFDIVRLVRKYQ 182
Query: 148 RVSNKWFRPRGD 159
P D
Sbjct: 183 HDERMPIHPHDD 194
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAGDSGD 85
+I ++G GVGKSAL ++FI R F+ +YD +E Y Q +D ++ EILD+AG
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEEF 78
Query: 86 TALETPVVLVGN 97
+ + + G+
Sbjct: 79 STMREQYLRTGS 90
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 91 PVVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEIS--VRESIDQV-WSVFRDARRFW 147
P++LVGNK D +R ++ E + + + + + E S +R+++D+ + + R R++
Sbjct: 124 PIILVGNKADLENERHVARHEAEELAHRLS-IPYLECSAKIRKNVDEAFFDIVRLVRKYQ 182
Query: 148 RVSNKWFRPRGD 159
P D
Sbjct: 183 HDERMPIHPHDD 194
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAGDSGD 85
+I ++G GVGKSAL ++FI R F+ +YD +E Y Q +D ++ EILD+AG
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEEF 78
Query: 86 TALETPVVLVGN 97
+ + + G+
Sbjct: 79 STMREQYLRTGS 90
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAGDSGD 85
+I ++G GVGKSAL ++FI R F+ +YD +E Y Q +D ++ EILD+AG
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEEF 78
Query: 86 TALETPVVLVGN 97
+ + + G+
Sbjct: 79 STMREQYLRTGS 90
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 91 PVVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEIS--VRESIDQV-WSVFRDARRFW 147
P++LVGNK D +R ++ E + + + + + E S +R+++D+ + + R R++
Sbjct: 124 PIILVGNKADLENERHVARHEAEELAHRLS-IPYLECSAKIRKNVDEAFFDIVRLVRKYQ 182
Query: 148 RVSNKWFRPRGD 159
P D
Sbjct: 183 HDERMPIHPHDD 194
>AF045637-2|AAN63433.1| 168|Caenorhabditis elegans R-ras related
protein 1, isoform b protein.
Length = 168
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAGDSGD 85
+I ++G GVGKSAL ++FI R F+ +YD +E Y Q +D ++ EILD+AG
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEEF 78
Query: 86 TALETPVVLVGN 97
+ + + G+
Sbjct: 79 STMREQYLRTGS 90
>AF045637-1|AAK72295.1| 212|Caenorhabditis elegans R-ras related
protein 1, isoform a protein.
Length = 212
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAGDSGD 85
+I ++G GVGKSAL ++FI R F+ +YD +E Y Q +D ++ EILD+AG
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEEF 78
Query: 86 TALETPVVLVGN 97
+ + + G+
Sbjct: 79 STMREQYLRTGS 90
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 91 PVVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEIS--VRESIDQV-WSVFRDARRFW 147
P++LVGNK D +R ++ E + + + + + E S +R+++D+ + + R R++
Sbjct: 124 PIILVGNKADLENERHVARHEAEELAHRLS-IPYLECSAKIRKNVDEAFFDIVRLVRKYQ 182
Query: 148 RVSNKWFRPRGD 159
P D
Sbjct: 183 HDERMPIHPHDD 194
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 23 KAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAGD 82
K +KI +LG GVGKSAL ++++ F+ YD+ +E Y + +D E EILD+AG
Sbjct: 2 KEYKIVVLGNGGVGKSALTLQYVQGIFVHTYDATIEDSYRKLSKVDAENARLEILDTAGT 61
Query: 83 SGDTAL 88
T +
Sbjct: 62 EQFTGM 67
>AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical
protein Y71F9AR.2 protein.
Length = 244
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/53 (43%), Positives = 37/53 (69%)
Query: 27 IAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDS 79
+A++G +G GKSA+ V++IT+RFIGEYDS LE Y Q + + + ++D+
Sbjct: 12 VALVGMAGSGKSAIAVKYITKRFIGEYDSTLEDNYCRQETVGGQSLMVWMMDT 64
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 54.4 bits (125), Expect = 8e-08
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAGDSG 84
+K+ ++G GVGKS+L ++F ++F+ YD +E Y ID V ++LD+AG
Sbjct: 18 YKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQYIQHCEIDGNWVIMDVLDTAGQEE 77
Query: 85 DTALETPVVLVG 96
+A+ + G
Sbjct: 78 FSAMREQYIRGG 89
Score = 35.5 bits (78), Expect = 0.040
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 89 ETPVVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVRESIDQVWSVFRDARRFWR 148
E PV+LV NK+D + R++S +EG+ + ++ + + E S +E V + F + R R
Sbjct: 122 EYPVLLVANKVDLINQRVVSEQEGRELAAQLK-LMYIETSAKEPPVNVDAAFHELVRIVR 180
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 54.4 bits (125), Expect = 8e-08
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAGDSG 84
+K+ ++G GVGKS+L ++F ++F+ YD +E Y ID V ++LD+AG
Sbjct: 18 YKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQYIQHCEIDGNWVIMDVLDTAGQEE 77
Query: 85 DTALETPVVLVG 96
+A+ + G
Sbjct: 78 FSAMREQYIRGG 89
Score = 35.5 bits (78), Expect = 0.040
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 89 ETPVVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVRESIDQVWSVFRDARRFWR 148
E PV+LV NK+D + R++S +EG+ + ++ + + E S +E V + F + R R
Sbjct: 122 EYPVLLVANKVDLINQRVVSEQEGRELAAQLK-LMYIETSAKEPPVNVDAAFHELVRIVR 180
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ +LG+S VGKS+LV+RF+ +F +S + + QTV +D+ + FEI D+AG
Sbjct: 20 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAG 77
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral
(ras-related gtpase) homologprotein 1 protein.
Length = 213
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAGDSGD 85
K+ ++G GVGKSAL ++F+ F+ EY+ Y + V+D E +ILD+AG
Sbjct: 19 KVIMVGTGGVGKSALTLQFMYDEFVEEYEPTKADSYRKKVVLDGEECSIDILDTAGQEDY 78
Query: 86 TAL 88
+A+
Sbjct: 79 SAI 81
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
Query: 91 PVVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISV--RESIDQV-WSVFRDARR 145
P+VLVGNK D R++S E ++R+++ GC + E S RE++D+V + + R+ +R
Sbjct: 125 PIVLVGNKGDMRDQRVVSAELCRQRAEQWGC-HYVETSAKRRENVDKVFYDLMREMKR 181
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 21 KPKAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDS 79
K K+ ILG SGVGK++L+ +++ RRF +Y + + + + V ID+ V +I D+
Sbjct: 6 KKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWDT 65
Query: 80 AG 81
AG
Sbjct: 66 AG 67
Score = 35.1 bits (77), Expect = 0.053
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 91 PVVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVRESID 134
P VL+GNK+D R +S++ Q + G + ++E+S +E+++
Sbjct: 120 PFVLLGNKVDLESQRAVSSKRAQSWCQTKGNIPYYEVSAKEALN 163
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 20 PKPKAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILD 78
P + F+I + G + VGKS+ V+R I R+F + S L + +TV +D V ++ D
Sbjct: 457 PAERTFRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWD 516
Query: 79 SAG 81
+AG
Sbjct: 517 TAG 519
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ I+G SGVGKS+L++RF F Y + + + +T+ I+ + V +I D+AG
Sbjct: 11 FKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAG 68
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like
protein.
Length = 69
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ ++G SGVGKS L++RF + Y S + + +T+ +D + + +I D+AG
Sbjct: 12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG 69
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ ++G SGVGKS L++RF + Y S + + +T+ +D + + +I D+AG
Sbjct: 12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG 69
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAGDS 83
FKI +LG+ VGKS+LV+RF+ +F ++ S ++ + +TV +++ I D+AG
Sbjct: 13 FKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQE 72
Query: 84 GDTAL 88
AL
Sbjct: 73 KYHAL 77
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK I+G +GVGKS L+++F +RF +D + + + V ID + + +I D+AG
Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWDTAG 64
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 92 VVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVRESIDQVWSVFRDARRFWR 148
++L+GNK D R + EEG+ ++E G V F E S + + + + A+ +R
Sbjct: 114 IMLIGNKSDLEARREVKREEGEAFAREHGLV-FMETSAKTAANVEEAFIDTAKEIYR 169
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQT-VIDNEMVYFEILDSAGD 82
FKI ++G GVGK+ +V RF F+ + + + +T V+D + V +I D+AG+
Sbjct: 11 FKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDTAGE 69
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK I+G GVGKS L++RFI + F + S L + F+ + ID + V + D+ G
Sbjct: 7 FKYVIIGDRGVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTCG 64
Score = 35.5 bits (78), Expect = 0.040
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 92 VVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVR 130
+VL+GNK D DR + EEG+ ++E G + F EIS +
Sbjct: 114 IVLIGNKSDLEADREVRKEEGEAFAREFGLI-FMEISAK 151
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 23 KAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAG 81
+A K ++G VGK+ L++ + T F GEY + Y+ ++D + + D+AG
Sbjct: 2 QAIKCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDTAG 60
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 23 KAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAG 81
+A K ++G VGK+ L++ + T F GEY + Y+ ++D + + D+AG
Sbjct: 2 QAIKCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDTAG 60
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 19 YPKPKAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQT-VIDNEMVYFEIL 77
Y + + FK+ I+G + VGK+ L RF RF ++ + + ++ VI+NE++ ++
Sbjct: 95 YKQKRTFKVIIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENELLRVQLW 154
Query: 78 DSAG 81
D+AG
Sbjct: 155 DTAG 158
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 89 ETPVVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFH-EISVRESIDQVWSVF 140
E P +L+GNK D +ST+E Q + F + D V S+F
Sbjct: 209 EVPRILIGNKCDVECTNRVSTDEAQMFADRNNMALFETSAKLASEADHVESIF 261
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small
ras-related protein protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 23 KAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAG 81
+A K ++G VGK+ L++ + T F GEY + Y+ ++D + + D+AG
Sbjct: 2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAG 60
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 23 KAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAG 81
+A K ++G VGK+ L++ + T F GEY + Y+ ++D + + D+AG
Sbjct: 2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAG 60
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 23 KAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAG 81
+A K ++G VGK+ L++ + T F GEY + Y+ ++D + + D+AG
Sbjct: 2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAG 60
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 23 KAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAG 81
+A K ++G VGK+ L++ + T F GEY + Y+ ++D + + D+AG
Sbjct: 2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAG 60
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 23 KAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAG 81
+A K ++G VGK+ L++ + T F GEY + Y+ ++D + + D+AG
Sbjct: 2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAG 60
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 23 KAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAG 81
+A K ++G VGK+ L++ + T F GEY + Y+ ++D + + D+AG
Sbjct: 2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAG 60
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ ++G SGVGKS L+ RF F E S + +A +++ ++ + V +I D+AG
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQIWDTAG 69
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ ++G SGVGKS L+ RF F E S + +A +++ ++ + V +I D+AG
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAG 69
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAG 81
K+A++G VGKSALV+RF F Y+S +E ++ + + + D+AG
Sbjct: 15 KVAVMGYPHVGKSALVLRFTQNIFPERYESTIEDQHSKHIAAFHRDYHLRVTDTAG 70
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 84 GDTALETPVVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVRESIDQVWSVF 140
GDT++ P+V+VGNK D R++ EEG+ +++ F EI+ RES ++V VF
Sbjct: 115 GDTSI--PIVIVGNKTDLSTQRVVRAEEGEELARQWDAK-FVEITARES-NRVHEVF 167
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like
protein.
Length = 66
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK I+G +GVGKS L+++F +RF +D + + + V ID + + ++ D+AG
Sbjct: 7 FKHIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQMWDTAG 64
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like
protein.
Length = 66
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDS 79
FK+ I+G SGVGKS+L++RF F Y + + + +T+ I+ + V +I D+
Sbjct: 11 FKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDT 66
>Z75710-3|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 27 IAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVI-DNEMVYFEILDSAG 81
+A+LG VGKSA+V +F+ +F+ +Y +E+ + I + ++ +I+DS+G
Sbjct: 25 VAVLGAERVGKSAMVSQFLWHKFVEDYRPTVEEFNWIEYEIEEGRVLMVQIIDSSG 80
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/60 (28%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 24 AFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQ--TVIDNEMVYFEILDSAG 81
++K+ ++G GVGK++++ RF+ F Y + + +A + V +N +V+ +I D +G
Sbjct: 11 SYKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISG 70
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like
protein.
Length = 123
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ ++G SGVGK+ ++ RF F + S + + +T+ +D + + +I D+AG
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family
protein 6.2 protein.
Length = 205
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 23 KAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
K FK+ LG+ VGK++L+ RF+ F Y + + + +T+ +++ V ++ D+AG
Sbjct: 9 KKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 68
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 92 VVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVRESIDQVWSVFR 141
++LVGNK D R ++T+EG+R++KE+ V F E S + + V +FR
Sbjct: 118 IMLVGNKTDLSDKRQVTTDEGERKAKELN-VMFIETSAKAGYN-VKQLFR 165
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase
GLO-1 protein.
Length = 212
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/60 (28%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 24 AFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQ--TVIDNEMVYFEILDSAG 81
++K+ ++G GVGK++++ RF+ F Y + + +A + V +N +V+ +I D +G
Sbjct: 11 SYKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISG 70
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQT-VIDNEMVYFEILDSAG 81
FKI ++G GVGK+ +V RF F+ + + + +T V+D + V +I D+ G
Sbjct: 11 FKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDTGG 68
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ ++G SGVGK+ ++ RF F + S + + +T+ +D + + +I D+AG
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
KI I+G+SGVGKS+L++RF+ F E + + + ++ ID V I D+AG
Sbjct: 13 KILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAG 69
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ ++G SGVGK+ ++ RF F + S + + +T+ +D + + +I D+AG
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAG 66
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 23 KAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
K FK+ LG+ VGK++++ RF+ F Y + + + +T+ +++ + ++ D+AG
Sbjct: 10 KKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAG 69
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 92 VVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVRESIDQVWSVFR 141
+VLVGNK D R +STE+G+++++++ V F E S + + V +FR
Sbjct: 119 IVLVGNKTDLADKRQVSTEDGEKKARDLN-VMFIETSAKAGYN-VKQLFR 166
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 23 KAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAG 81
+ K ++G VGK+ L++ + T +F EY + YA +I E + D+AG
Sbjct: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 23 KAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAG 81
+ K ++G VGK+ L++ + T +F EY + YA +I E + D+AG
Sbjct: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTAMIGGEPYTLGLFDTAG 60
>U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey2
ras-like proteinhomolog protein 1 protein.
Length = 125
Score = 36.7 bits (81), Expect = 0.017
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 84 GDTALETPVVLVGNKIDQLGDRMISTEEGQRRSKEIGC 121
G+ ETP++LVGNK D+ R +S+ GQ+ + + C
Sbjct: 39 GNAIAETPIMLVGNKKDEESKREVSSNSGQKVATNMEC 76
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine
nucleotide regulatory proteinprotein.
Length = 188
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAG 81
K ++G VGK+ L++ + T +F EY + YA +I E + D+AG
Sbjct: 2 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 57
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 36.3 bits (80), Expect = 0.023
Identities = 15/56 (26%), Positives = 32/56 (57%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAG 81
K+ ++G + GK++L+V + ++F+ Y + + +A IDN+ + D+AG
Sbjct: 6 KLVVVGDTYTGKTSLLVAYTKKQFLDNYTTTVFDNWAVSVHIDNKNYAVNLFDTAG 61
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 35.9 bits (79), Expect = 0.030
Identities = 20/49 (40%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 92 VVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVRESIDQVWSVF 140
VVLVGNK D +R++S + G++ + ++G + F E S +E+I+ V +VF
Sbjct: 130 VVLVGNKCDMDSERVVSMDRGRQLADQLG-LEFFETSAKENIN-VKAVF 176
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVI-DNEMVYFEILDSAG 81
FK+ I+G S VGK++ + R+ F + S + + +TV ++ V +I D+AG
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAG 80
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 35.9 bits (79), Expect = 0.030
Identities = 20/49 (40%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 92 VVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVRESIDQVWSVF 140
VVLVGNK D +R++S + G++ + ++G + F E S +E+I+ V +VF
Sbjct: 130 VVLVGNKCDMDSERVVSMDRGRQLADQLG-LEFFETSAKENIN-VKAVF 176
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVI-DNEMVYFEILDSAG 81
FK+ I+G S VGK++ + R+ F + S + + +TV ++ V +I D+AG
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAG 80
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 35.9 bits (79), Expect = 0.030
Identities = 20/49 (40%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 92 VVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVRESIDQVWSVF 140
VVLVGNK D +R++S + G++ + ++G + F E S +E+I+ V +VF
Sbjct: 130 VVLVGNKCDMDSERVVSMDRGRQLADQLG-LEFFETSAKENIN-VKAVF 176
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVI-DNEMVYFEILDSAG 81
FK+ I+G S VGK++ + R+ F + S + + +TV ++ V +I D+AG
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAG 80
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 35.9 bits (79), Expect = 0.030
Identities = 20/49 (40%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 92 VVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVRESIDQVWSVF 140
VVLVGNK D +R++S + G++ + ++G + F E S +E+I+ V +VF
Sbjct: 144 VVLVGNKCDMDSERVVSMDRGRQLADQLG-LEFFETSAKENIN-VKAVF 190
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVI-DNEMVYFEILDSAG 81
FK+ I+G S VGK++ + R+ F + S + + +TV ++ V +I D+AG
Sbjct: 37 FKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAG 94
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 35.9 bits (79), Expect = 0.030
Identities = 20/49 (40%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 92 VVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVRESIDQVWSVF 140
VVLVGNK D +R++S + G++ + ++G + F E S +E+I+ V +VF
Sbjct: 130 VVLVGNKCDMDSERVVSMDRGRQLADQLG-LEFFETSAKENIN-VKAVF 176
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVI-DNEMVYFEILDSAG 81
FK+ I+G S VGK++ + R+ F + S + + +TV ++ V +I D+AG
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAG 80
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family
protein 10 protein.
Length = 201
Score = 35.5 bits (78), Expect = 0.040
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 20 PKPKAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILD 78
P FK+ ++G SGVGK+ ++ RF F + S + + +T+ + + + +I D
Sbjct: 5 PYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWD 64
Query: 79 SAG 81
+AG
Sbjct: 65 TAG 67
Score = 31.5 bits (68), Expect = 0.65
Identities = 13/41 (31%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 93 VLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVRESI 133
+++GNK D R++S E G++ +++ G + FHE S + ++
Sbjct: 118 MILGNKCDMSDRRVVSRERGEKIAQDHG-ISFHETSAKLNV 157
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 35.5 bits (78), Expect = 0.040
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 20 PKPKAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILD 78
P FK+ ++G SGVGK+ ++ RF F + S + + +T+ + + + +I D
Sbjct: 5 PYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWD 64
Query: 79 SAG 81
+AG
Sbjct: 65 TAG 67
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 35.5 bits (78), Expect = 0.040
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK+ ++G +GVGK+ LV +F F + + + +TV + N+ + +I D+AG
Sbjct: 8 FKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIWDTAG 65
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 35.1 bits (77), Expect = 0.053
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FKI ++G GKS +++RF F ++ S L + +T+ + + + E+ D+AG
Sbjct: 7 FKIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIRLELWDTAG 64
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 35.1 bits (77), Expect = 0.053
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 91 PVVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVRESIDQVWSVFRDARRFWRVS 150
P+VLVG+K D R++++ EGQ+ ++ +G + F E+S +++ D V+ F + +
Sbjct: 323 PIVLVGSKKDMRVKRVVTSFEGQQLARTLG-IPFLEVSSKQN-DCVFEAFEELVSLIQKQ 380
Query: 151 NKWFR 155
N F+
Sbjct: 381 NAAFK 385
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 34.7 bits (76), Expect = 0.070
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 18 LYPKPKAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEI 76
+YP FK I+G GVGKS L++RF F + + L + ++ + ID V +
Sbjct: 1 MYPD-HMFKYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRV 59
Query: 77 LDSAG 81
D+ G
Sbjct: 60 WDTCG 64
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 89 ETPVVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVR 130
E ++L+GNK D R ++TEEG+ +K+ G + F E S +
Sbjct: 111 EMVIMLIGNKSDLKAVRDVTTEEGEAFAKKNG-LTFMETSAK 151
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 34.3 bits (75), Expect = 0.092
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK I+G GVGKS L+ +F ++F+ + + + + + + + + +I D+AG
Sbjct: 12 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAG 69
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 34.3 bits (75), Expect = 0.092
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FK I+G GVGKS L+ +F ++F+ + + + + + + + + +I D+AG
Sbjct: 12 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAG 69
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSAG 81
FKI ++G GVGKS L+ RF F + + +A + + ++ + V +I D+AG
Sbjct: 9 FKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAG 66
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/55 (23%), Positives = 32/55 (58%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDS 79
+++ +LG + VGK+ ++ R++ F +Y +E +++ + I + +ILD+
Sbjct: 18 YRLVVLGSAKVGKTNIIRRYLYNEFSSKYKETIEDLHSREFRIQGVPLPLDILDT 72
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like
protein.
Length = 67
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/59 (27%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 23 KAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV-IDNEMVYFEILDSA 80
K F++ LG+ VGK++L+ RF+ F Y + + + +T+ +++ V ++ D+A
Sbjct: 9 KKFELVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQMWDTA 67
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 2 AVSTSTSPKSSLAKLVLYPKPKAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIY 61
A+ K + + V P + FK+ +G S VGK+ + RF RF +++ + +
Sbjct: 181 AIGKKVLQKEEIEEEVTQPD-RIFKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDF 239
Query: 62 AFQT--VIDNEMVYFEILDSAG 81
+T + N + ++ D+AG
Sbjct: 240 TVKTMKIPPNRAIAMQLWDTAG 261
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 25 FKIAILGQSGVGKSALVVRFITRRFIGEYDSNL-EKIYAFQTVIDNEMVYFEILDSAG 81
FK+ ++G G GK+ V R +T F +Y + L +++ + + F + D+AG
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAG 67
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like
protein.
Length = 65
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 23 KAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNL 57
K FK+ LG+ VGK++++ RF+ F Y + +
Sbjct: 10 KKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATI 44
>AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical
protein Y52B11A.4 protein.
Length = 467
Score = 31.1 bits (67), Expect = 0.86
Identities = 14/57 (24%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 23 KAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV----IDNEMVYFE 75
K +KI ++G +G GKS+L+ + IT + + ++ ++ ++ ++V+FE
Sbjct: 236 KTYKIYVVGDTGTGKSSLISQLITSEYKNAFADEIQDYENTVSICIGGVECDLVFFE 292
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 189 YRQWTAMELDEEEE---ATVVRSNSTSSSGQSDCLEEFR 224
Y++W E D E E T+ + S+SSS QS EFR
Sbjct: 228 YKEWMQKEKDRETELGLETLYPTTSSSSSAQSSAQSEFR 266
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like
protein.
Length = 115
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/24 (54%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Query: 20 PKPKAFKIAILGQSGVGKSALVVR 43
PK KA K+ +LG SGVGK++++ R
Sbjct: 49 PKHKA-KVVVLGDSGVGKTSIIYR 71
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/24 (54%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Query: 20 PKPKAFKIAILGQSGVGKSALVVR 43
PK KA K+ +LG SGVGK++++ R
Sbjct: 49 PKHKA-KVVVLGDSGVGKTSIIYR 71
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine
nucleotide regulatory proteinprotein.
Length = 192
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAG 81
K+ I+G GK+ L++ F +F Y + + Y +D + V + D+AG
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAG 62
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVIDNEMVYFEILDSAG 81
K+ I+G GK+ L++ F +F Y + + Y +D + V + D+AG
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAG 62
>AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical
protein W04C9.5 protein.
Length = 369
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 92 VVLVGNKIDQLGDRMISTEEGQRRSKEIGCVCFHEISVRES--IDQVWSV 139
++L+GNKID + ++S EG +K C F E+S + S I ++W++
Sbjct: 280 IILIGNKIDLKRNTVVSKMEGACLAKVHKC-NFVEVSAQYSMNISELWTI 328
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 23 KAFKIAILGQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTV--IDNEMVYFEILDSA 80
K K+ ++G+SG GK+AL+ F+ F + + + + + V D + + ++ D+A
Sbjct: 5 KTVKVVVVGESGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLNDGQSIRLQLWDTA 64
Query: 81 G 81
G
Sbjct: 65 G 65
>U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein.
Length = 35
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/17 (64%), Positives = 17/17 (100%)
Query: 29 ILGQSGVGKSALVVRFI 45
I+G+SGVGKS+L++RF+
Sbjct: 2 IIGESGVGKSSLMLRFV 18
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like
protein.
Length = 70
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 10/62 (16%)
Query: 21 KPKAFKIAILGQSGVGKSA---------LVVRFITRRFIGEYDSNLEKIYAFQTV-IDNE 70
K K+ ILG SGVGK++ L+ +++ RRF+ +Y + + + + V ID+
Sbjct: 6 KKALLKVIILGDSGVGKTSLMNQYEIGDLMNQYVNRRFMNQYKATIGADFLTRDVNIDDR 65
Query: 71 MV 72
V
Sbjct: 66 TV 67
>U23449-6|AAC24300.2| 937|Caenorhabditis elegans Hypothetical
protein K06A1.6 protein.
Length = 937
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 161 DVHTTALSRPLARASSDTTPE-TNVNPPFYRQWTAMELDEEEEATVVRSNSTSS 213
D+H++ L + R+S+D+ E NV+ W++ E +E + +ST++
Sbjct: 92 DIHSSLLQLSIERSSNDSNEEHENVSVSSESSWSSASDSESDEDSATGRDSTNN 145
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNL 57
K LG SGVGK++ + R+ F G++ S +
Sbjct: 9 KFLALGDSGVGKTSFLHRYTDNTFTGQFISTV 40
>AC006673-3|AAF39929.1| 861|Caenorhabditis elegans Hypothetical
protein K09D9.11 protein.
Length = 861
Score = 28.7 bits (61), Expect = 4.6
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 41 VVRFITRRFIGEYDSNLEKIYAFQTVIDN-EMVYFEI--LDSAGDSGDTALETPVVLVGN 97
VVRF T +GE +S LE++ Q +N E + +S DS +L+TP+VL +
Sbjct: 236 VVRFTTDVTMGEINSLLEQVTTIQNNTENLEKTVRNVGQKNSKNDSLVLSLQTPMVL--S 293
Query: 98 KIDQLGDRMISTEEGQRRSKE 118
+ L +++ E RR+++
Sbjct: 294 ESIGLSAKVLEDLEKTRRNRK 314
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 26 KIAILGQSGVGKSALVVRFITRRFIGEYDSNL 57
K LG SGVGK++ + R+ F G++ S +
Sbjct: 9 KFLALGDSGVGKTSFLHRYTDNTFTGQFISTV 40
>Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical
protein F46B3.5 protein.
Length = 946
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 196 ELDEEEEATVVRSNSTSSSGQSDCLEEFRARASTD 230
E+D+ E +V+ SNS S+ + D +EF ++ +TD
Sbjct: 209 EVDDLMEISVMDSNSNSTHLEEDLKKEFASKFNTD 243
>Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical
protein C44H4.3 protein.
Length = 680
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 145 RFWRVSNKWFRPRGDTD-VHTTALSRPLARASSDTTPETNVNPPFYRQWTAMELDEEEEA 203
RFWR+SNK P G + + + ++P ++ PE + E EE E
Sbjct: 561 RFWRLSNK---PSGKSPFLRHSQGNKPRYLQTTTEAPEEEDEAEYISDDGGAEESEEAET 617
Query: 204 TVVRSNSTSSS 214
TV + +T S
Sbjct: 618 TVATTTTTEPS 628
>AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein
protein.
Length = 680
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 145 RFWRVSNKWFRPRGDTD-VHTTALSRPLARASSDTTPETNVNPPFYRQWTAMELDEEEEA 203
RFWR+SNK P G + + + ++P ++ PE + E EE E
Sbjct: 561 RFWRLSNK---PSGKSPFLRHSQGNKPRYLQTTTEAPEEEDEAEYISDDGGAEESEEAET 617
Query: 204 TVVRSNSTSSS 214
TV + +T S
Sbjct: 618 TVATTTTTEPS 628
>Z47075-7|CAA87384.1| 394|Caenorhabditis elegans Hypothetical
protein E02H1.2 protein.
Length = 394
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 5 TSTSPKSSLAKLVLYPKPKAFKIAILGQSGVGKSAL 40
++ S +S K + P K ++A++G VGKS L
Sbjct: 14 STASTSTSYEKTPIQPATKCLQLAVIGAPNVGKSLL 49
>Z36752-8|CAA85330.1| 394|Caenorhabditis elegans Hypothetical
protein E02H1.2 protein.
Length = 394
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 5 TSTSPKSSLAKLVLYPKPKAFKIAILGQSGVGKSAL 40
++ S +S K + P K ++A++G VGKS L
Sbjct: 14 STASTSTSYEKTPIQPATKCLQLAVIGAPNVGKSLL 49
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 27.9 bits (59), Expect = 8.0
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 24 AFKIAILGQSGVGKSALVVRFI------TRRFIGEYDSNLEKIYAFQTVIDNEMVYFEIL 77
+ I + GQ G GK+A +R + R I S K F+T+ ++ + +
Sbjct: 195 SLSIYVSGQPGTGKTATTMRVLKSLGKSVRSCIVNCASTNTKSALFKTIFESLDLDGKPN 254
Query: 78 DSAGDSGDTALETPVVLVGNKIDQLGDR 105
+ + +TP+VLV ++ID L +R
Sbjct: 255 EEIFEKHVKQFKTPLVLVLDEIDHLANR 282
>U80032-3|AAM15556.1| 404|Caenorhabditis elegans Sox (mammalian sry
box) familyprotein 1 protein.
Length = 404
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 185 NPPFYRQWTAMELDEEEEATVVRSNSTSSSGQSDCLEEFRARASTDS 231
N PFY + +D+++ +RS S+ SSG +DC ++ +S +S
Sbjct: 315 NHPFYLHTSPPSVDQDD----MRSLSSGSSGYADCSASEQSTSSPNS 357
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 17 VLYPKPKAFKIAILGQSGVGKSALVVRFI 45
+L P K KI + G +GVGK+ L++ I
Sbjct: 201 LLAPYAKGGKIGLFGGAGVGKTVLIMELI 229
>AL110478-7|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 31 GQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVI 67
G+SG GK+ L++ + +F G+ + + +Y F T +
Sbjct: 738 GKSGCGKTNLLMNLLLDKFQGDDYLDYDNLYIFSTTL 774
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 31 GQSGVGKSALVVRFITRRFIGEYDSNLEKIYAFQTVI 67
G+SG GK+ L++ + +F G+ + + +Y F T +
Sbjct: 702 GKSGCGKTNLLMNLLLDKFQGDDYLDYDNLYIFSTTL 738
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.129 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,744,571
Number of Sequences: 27539
Number of extensions: 222660
Number of successful extensions: 939
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 799
Number of HSP's gapped (non-prelim): 150
length of query: 268
length of database: 12,573,161
effective HSP length: 80
effective length of query: 188
effective length of database: 10,370,041
effective search space: 1949567708
effective search space used: 1949567708
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
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