Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000951-TA|BGIBMGA000951-PA|undefined
         (810 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      33   0.006
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      33   0.006
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    32   0.018
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    31   0.031
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    25   1.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    24   4.8  

>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 33.5 bits (73), Expect = 0.006
 Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 11/112 (9%)

Query: 428 DKIDNHKLIHNPMSFIPNL-----KDGCSEMLPLQNYSSSHSTEPIDIKKTGRIKVTVL- 481
           + +DN  LIH    F+ ++     +   +   P+  Y  S  T+    K+ G IK   + 
Sbjct: 363 NNLDNFYLIHTDTYFLRDIIFAIRQHAITAKFPIYLYRMSVETKLNVFKRIGNIKAPGVC 422

Query: 482 ---DKKTLSDTELSPEKNTKKLPTINIKRTNDFY-HIGSNGNIKT-VTNWNP 528
              D   L  T+LSPE  T  L  I++KR   F+ +   NG+      +W P
Sbjct: 423 HGDDIGYLFKTKLSPELKTGSLEEISVKRFVKFWTNFARNGSPNVDGPDWKP 474


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 33.5 bits (73), Expect = 0.006
 Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 11/112 (9%)

Query: 428 DKIDNHKLIHNPMSFIPNL-----KDGCSEMLPLQNYSSSHSTEPIDIKKTGRIKVTVL- 481
           + +DN  LIH    F+ ++     +   +   P+  Y  S  T+    K+ G IK   + 
Sbjct: 365 NNLDNFYLIHTDTYFLRDIIFAIRQHAITAKFPIYLYRMSVETKLNVFKRIGNIKAPGVC 424

Query: 482 ---DKKTLSDTELSPEKNTKKLPTINIKRTNDFY-HIGSNGNIKT-VTNWNP 528
              D   L  T+LSPE  T  L  I++KR   F+ +   NG+      +W P
Sbjct: 425 HGDDIGYLFKTKLSPELKTGSLEEISVKRFVKFWTNFARNGSPNVDGPDWKP 476


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 31.9 bits (69), Expect = 0.018
 Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 11/112 (9%)

Query: 428 DKIDNHKLIHNPMSFIPNL-----KDGCSEMLPLQNYSSSHSTEPIDIKKTGRIKVTVL- 481
           + +DN  LIH    F+ ++     +   +   P+  Y  S  T+    K+ G IK   + 
Sbjct: 365 NNLDNFYLIHTDTYFLRDIIFAIRQHAVTAKFPIYLYRMSVETKLNVFKRIGNIKAPGVC 424

Query: 482 ---DKKTLSDTELSPEKNTKKLPTINIKRTNDFY-HIGSNGNIKT-VTNWNP 528
              D   L  T+LSPE     L  I++KR   F+ +   NG+      +W P
Sbjct: 425 HGDDIGYLFKTKLSPELKAGSLEEISVKRFVKFWTNFARNGSPNVDEPDWKP 476


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 31.1 bits (67), Expect = 0.031
 Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 11/112 (9%)

Query: 428 DKIDNHKLIHNPMSFIPNL-----KDGCSEMLPLQNYSSSHSTEPIDIKKTGRIKVTVL- 481
           + +DN  LIH    F+ ++     +   +   P+  Y  S  T+    K+ G IK   + 
Sbjct: 363 NNLDNFYLIHTDTYFLRDIIFAIRQHAVTAKFPIYLYRISVETKLNVFKRIGNIKAPGVC 422

Query: 482 ---DKKTLSDTELSPEKNTKKLPTINIKRTNDFY-HIGSNGNIKT-VTNWNP 528
              D   L  T+LSPE     L  I++KR   F+ +   NG+      +W P
Sbjct: 423 HGDDIGYLFKTKLSPELKAGSLEEISVKRFVKFWTNFARNGSPNVDGPDWKP 474


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 3/97 (3%)

Query: 445 NLKDGCSEMLPLQ-NYSSSHSTEPIDIKKTGRIKVTVLDKKTLSDTELSPEKNTKKLPTI 503
           N +  C + L  Q N S+S +T      K  +       +   + T +     +   PT+
Sbjct: 177 NRRAKCRQQLQQQQNKSASRTTTSPTKVKASKASPAAAPRSVATPTGIPTPSTSASPPTV 236

Query: 504 NIKRTN-DFYHIGSNGNIKTVTNWNPHLLVDNNKPTA 539
           NIK+ +         GNI T    N   L+    P+A
Sbjct: 237 NIKKESPQMQSYRPTGNI-TPHGSNTSSLITTPSPSA 272


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 132 LTQNWAEFAVTALGTLKDC 150
           LT N A++  T +G +K+C
Sbjct: 240 LTNNQAKYCTTLIGLIKNC 258


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.313    0.132    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,148
Number of Sequences: 317
Number of extensions: 7728
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 6
length of query: 810
length of database: 114,650
effective HSP length: 62
effective length of query: 748
effective length of database: 94,996
effective search space: 71057008
effective search space used: 71057008
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 47 (23.0 bits)